SRS10745771 SAMN22605118 1441287 mouse metagenome ['Small intestine sample of "A2" cohousing set-up, animal 6 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.14.2 cohousing_set-up Cohousing set-up "A2" animal_number 6 host_genotype Outbred mouse from pet store B host_tissue_sampled Small intestine collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745772 SAMN22605218 1441287 mouse metagenome ['Small intestine sample of "B1" cohousing set-up, animal 1 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.1.2 cohousing_set-up Cohousing set-up "B1" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745773 SAMN22605222 1441287 mouse metagenome ['Small intestine sample of "B1" cohousing set-up, animal 2 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.2.2 cohousing_set-up Cohousing set-up "B1" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745774 SAMN22605111 1441287 mouse metagenome ['Small intestine content sample of "A2" cohousing set-up, animal 4 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.12.8 cohousing_set-up Cohousing set-up "A2" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine content collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745775 SAMN22605226 1441287 mouse metagenome ['Small intestine sample of "B1" cohousing set-up, animal 3 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.3.2 cohousing_set-up Cohousing set-up "B1" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745776 SAMN22605230 1441287 mouse metagenome ['Small intestine sample of "B1" cohousing set-up, animal 4 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.4.2 cohousing_set-up Cohousing set-up "B1" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745777 SAMN22605234 1441287 mouse metagenome ['Small intestine sample of "B1" cohousing set-up, animal 5 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.5.2 cohousing_set-up Cohousing set-up "B1" animal_number 5 host_genotype Outbred mouse from pet store C host_tissue_sampled Small intestine collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745778 SAMN22605115 1441287 mouse metagenome ['Small intestine content sample of "A2" cohousing set-up, animal 5 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.13.8 cohousing_set-up Cohousing set-up "A2" animal_number 5 host_genotype Outbred mouse from pet store A host_tissue_sampled Small intestine content collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745779 SAMN22605258 1441287 mouse metagenome ['Small intestine sample of "B2" cohousing set-up, animal 2 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.7.2 cohousing_set-up Cohousing set-up "B2" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745780 SAMN22605059 1441287 mouse metagenome ['Small intestine content sample of "A1" cohousing set-up, animal 1 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.1.8 cohousing_set-up Cohousing set-up "A1" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine content collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745781 SAMN22605063 1441287 mouse metagenome ['Small intestine content sample of "A1" cohousing set-up, animal 2 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.3.8 cohousing_set-up Cohousing set-up "A1" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine content collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745782 SAMN22605099 1441287 mouse metagenome ['Small intestine content sample of "A2" cohousing set-up, animal 1 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.8.8 cohousing_set-up Cohousing set-up "A2" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine content collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745783 SAMN22605101 1441287 mouse metagenome ['Liver sample of "A2" cohousing set-up, animal 2 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.10.3 cohousing_set-up Cohousing set-up "A2" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Liver collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745784 SAMN22605102 1441287 mouse metagenome ['Small intestine sample of "A2" cohousing set-up, animal 2 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.10.2 cohousing_set-up Cohousing set-up "A2" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745785 SAMN22605109 1441287 mouse metagenome ['Liver sample of "A2" cohousing set-up, animal 4 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.12.3 cohousing_set-up Cohousing set-up "A2" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Liver collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745786 SAMN22605103 1441287 mouse metagenome ['Small intestine content sample of "A2" cohousing set-up, animal 2 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.10.8 cohousing_set-up Cohousing set-up "A2" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine content collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745787 SAMN22605110 1441287 mouse metagenome ['Small intestine sample of "A2" cohousing set-up, animal 4 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.12.2 cohousing_set-up Cohousing set-up "A2" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745788 SAMN22605114 1441287 mouse metagenome ['Small intestine sample of "A2" cohousing set-up, animal 5 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.13.2 cohousing_set-up Cohousing set-up "A2" animal_number 5 host_genotype Outbred mouse from pet store A host_tissue_sampled Small intestine collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745789 SAMN22605107 1441287 mouse metagenome ['Small intestine content sample of "A2" cohousing set-up, animal 3 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.11.8 cohousing_set-up Cohousing set-up "A2" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine content collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745790 SAMN22605262 1441287 mouse metagenome ['Small intestine sample of "B2" cohousing set-up, animal 3 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.8.2 cohousing_set-up Cohousing set-up "B2" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745791 SAMN22605119 1441287 mouse metagenome ['Small intestine content sample of "A2" cohousing set-up, animal 6 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.14.8 cohousing_set-up Cohousing set-up "A2" animal_number 6 host_genotype Outbred mouse from pet store B host_tissue_sampled Small intestine content collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745792 SAMN22605266 1441287 mouse metagenome ['Small intestine sample of "B2" cohousing set-up, animal 4 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.9.2 cohousing_set-up Cohousing set-up "B2" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745793 SAMN22605270 1441287 mouse metagenome ['Small intestine sample of "B2" cohousing set-up, animal 5 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.10.2 cohousing_set-up Cohousing set-up "B2" animal_number 5 host_genotype Outbred mouse from pet store B host_tissue_sampled Small intestine collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745794 SAMN22605274 1441287 mouse metagenome ['Small intestine sample of "C1" cohousing set-up, animal 1 of 3', ''] bioproject 775628 PRJNA775628 Sample_ID AK02.1.2 cohousing_set-up Cohousing set-up "C1" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2018-10-17 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745795 SAMN22605123 1441287 mouse metagenome ['Small intestine content sample of "A2" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.13.8 cohousing_set-up Cohousing set-up "A2", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine content collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745796 SAMN22605277 1441287 mouse metagenome ['Small intestine sample of "C1" cohousing set-up, animal 2 of 3', ''] bioproject 775628 PRJNA775628 Sample_ID AK02.3.2 cohousing_set-up Cohousing set-up "C1" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2018-10-17 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745797 SAMN22605280 1441287 mouse metagenome ['Small intestine sample of "C1" cohousing set-up, animal 3 of 3', ''] bioproject 775628 PRJNA775628 Sample_ID AK02.4.2 cohousing_set-up Cohousing set-up "C1" animal_number 3 host_genotype Outbred mouse from pet store A host_tissue_sampled Small intestine collection_date 2018-10-17 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745798 SAMN22605343 1427740 rat metagenome ['Small instestine sample of rat fomite transmission experiment, animal 1 of 8', ''] bioproject 775628 PRJNA775628 Sample_ID AK22.1.2 cohousing_set-up Rat fomite experiment animal_number 1 host_genotype Outbred rat from pet store A host_tissue_sampled Small intestine collection_date 2020-01-31 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Rattus norvegicus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745799 SAMN22605345 1427740 rat metagenome ['Small instestine sample of rat fomite transmission experiment, animal 2 of 8', ''] bioproject 775628 PRJNA775628 Sample_ID AK22.2.2 cohousing_set-up Rat fomite experiment animal_number 2 host_genotype Outbred rat from pet store A host_tissue_sampled Small intestine collection_date 2020-01-31 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Rattus norvegicus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745800 SAMN22605127 1441287 mouse metagenome ['Small intestine content sample of "A2" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.10.8 cohousing_set-up Cohousing set-up "A2", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine content collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745801 SAMN22605347 1441287 mouse metagenome ['Small instestine sample of rat fomite transmission experiment, animal 3 of 8', ''] bioproject 775628 PRJNA775628 Sample_ID AK22.3.2 cohousing_set-up Rat fomite experiment animal_number 3 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2020-01-31 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745802 SAMN22605349 1441287 mouse metagenome ['Small instestine sample of rat fomite transmission experiment, animal 4 of 8', ''] bioproject 775628 PRJNA775628 Sample_ID AK22.4.2 cohousing_set-up Rat fomite experiment animal_number 4 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2020-01-31 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745803 SAMN22605131 1441287 mouse metagenome ['Small intestine content sample of "A2" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.8.8 cohousing_set-up Cohousing set-up "A2", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine content collection_date 2019-01-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745804 SAMN22605351 1441287 mouse metagenome ['Small instestine sample of rat fomite transmission experiment, animal 5 of 8', ''] bioproject 775628 PRJNA775628 Sample_ID AK22.5.2 cohousing_set-up Rat fomite experiment animal_number 5 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2020-01-31 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745805 SAMN22605058 1441287 mouse metagenome ['Small intestine sample of "A1" cohousing set-up, animal 1 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.1.2 cohousing_set-up Cohousing set-up "A1" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745806 SAMN22605057 1441287 mouse metagenome ['Liver sample of "A1" cohousing set-up, animal 1 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.1.3 cohousing_set-up Cohousing set-up "A1" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745807 SAMN22605060 1441287 mouse metagenome ['Spleen/lymph node sample of "A1" cohousing set-up, animal 1 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.1.1 cohousing_set-up Cohousing set-up "A1" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745808 SAMN22605061 1441287 mouse metagenome ['Liver sample of "A1" cohousing set-up, animal 2 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.3.3 cohousing_set-up Cohousing set-up "A1" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Liver collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745809 SAMN22605135 1441287 mouse metagenome ['Small intestine content sample of "A2" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.4.8 cohousing_set-up Cohousing set-up "A2", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine content collection_date 2018-12-27 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745810 SAMN22605062 1441287 mouse metagenome ['Small intestine sample of "A1" cohousing set-up, animal 2 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.3.2 cohousing_set-up Cohousing set-up "A1" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745811 SAMN22605064 1441287 mouse metagenome ['Spleen/lymph node sample of "A1" cohousing set-up, animal 2 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.3.1 cohousing_set-up Cohousing set-up "A1" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745812 SAMN22605065 1441287 mouse metagenome ['Liver sample of "A1" cohousing set-up, animal 3 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.4.3 cohousing_set-up Cohousing set-up "A1" animal_number 3 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Liver collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745813 SAMN22605066 1441287 mouse metagenome ['Small intestine sample of "A1" cohousing set-up, animal 3 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.4.2 cohousing_set-up Cohousing set-up "A1" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745814 SAMN22605068 1441287 mouse metagenome ['Spleen/lymph node sample of "A1" cohousing set-up, animal 3 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.4.1 cohousing_set-up Cohousing set-up "A1" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745815 SAMN22605069 1441287 mouse metagenome ['Liver sample of "A1" cohousing set-up, animal 4 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.5.3 cohousing_set-up Cohousing set-up "A1" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Liver collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745816 SAMN22605070 1441287 mouse metagenome ['Small intestine sample of "A1" cohousing set-up, animal 4 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.5.2 cohousing_set-up Cohousing set-up "A1" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745817 SAMN22605072 1441287 mouse metagenome ['Spleen/lymph node sample of "A1" cohousing set-up, animal 4 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.5.1 cohousing_set-up Cohousing set-up "A1" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745818 SAMN22605073 1441287 mouse metagenome ['Liver sample of "A1" cohousing set-up, animal 5 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.6.3 cohousing_set-up Cohousing set-up "A1" animal_number 5 host_genotype Outbred mouse from pet store A host_tissue_sampled Liver collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745819 SAMN22605074 1441287 mouse metagenome ['Small intestine sample of "A1" cohousing set-up, animal 5 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.6.2 cohousing_set-up Cohousing set-up "A1" animal_number 5 host_genotype Outbred mouse from pet store A host_tissue_sampled Small intestine collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745820 SAMN22605067 1441287 mouse metagenome ['Small intestine content sample of "A1" cohousing set-up, animal 3 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.4.8 cohousing_set-up Cohousing set-up "A1" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine content collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745821 SAMN22605139 1441287 mouse metagenome ['Small intestine content sample of "A3" cohousing set-up, animal 1 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.15.8 cohousing_set-up Cohousing set-up "A3" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine content collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745822 SAMN22605076 1441287 mouse metagenome ['Spleen/lymph node sample of "A1" cohousing set-up, animal 5 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.6.1 cohousing_set-up Cohousing set-up "A1" animal_number 5 host_genotype Outbred mouse from pet store A host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745823 SAMN22605077 1441287 mouse metagenome ['Liver sample of "A1" cohousing set-up, animal 6 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.7.3 cohousing_set-up Cohousing set-up "A1" animal_number 6 host_genotype Outbred mouse from pet store B host_tissue_sampled Liver collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745824 SAMN22605080 1441287 mouse metagenome ['Spleen/lymph node sample of "A1" cohousing set-up, animal 6 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.7.1 cohousing_set-up Cohousing set-up "A1" animal_number 6 host_genotype Outbred mouse from pet store B host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745825 SAMN22605078 1441287 mouse metagenome ['Small intestine sample of "A1" cohousing set-up, animal 6 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.7.2 cohousing_set-up Cohousing set-up "A1" animal_number 6 host_genotype Outbred mouse from pet store B host_tissue_sampled Small intestine collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745826 SAMN22605081 1441287 mouse metagenome ['Liver sample of "A1" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.12.3 cohousing_set-up Cohousing set-up "A1", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745827 SAMN22605082 1441287 mouse metagenome ['Small intestine sample of "A1" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.12.2 cohousing_set-up Cohousing set-up "A1", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745828 SAMN22605084 1441287 mouse metagenome ['Spleen/lymph node sample of "A1" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.12.1 cohousing_set-up Cohousing set-up "A1", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745829 SAMN22605085 1441287 mouse metagenome ['Liver sample of "A1" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.2.3 cohousing_set-up Cohousing set-up "A1", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Liver collection_date 2018-12-27 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745830 SAMN22605086 1441287 mouse metagenome ['Small intestine sample of "A1" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.2.2 cohousing_set-up Cohousing set-up "A1", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2018-12-27 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745831 SAMN22605143 1441287 mouse metagenome ['Small intestine content sample of "A3" cohousing set-up, animal 2 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.16.8 cohousing_set-up Cohousing set-up "A3" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine content collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745832 SAMN22605088 1441287 mouse metagenome ['Spleen/lymph node sample of "A1" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.2.1 cohousing_set-up Cohousing set-up "A1", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-12-27 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745833 SAMN22605089 1441287 mouse metagenome ['Liver sample of "A1" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.7.3 cohousing_set-up Cohousing set-up "A1", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Liver collection_date 2019-01-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745834 SAMN22605092 1441287 mouse metagenome ['Spleen/lymph node sample of "A1" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.7.1 cohousing_set-up Cohousing set-up "A1", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-01-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745835 SAMN22605090 1441287 mouse metagenome ['Small intestine sample of "A1" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.7.2 cohousing_set-up Cohousing set-up "A1", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine collection_date 2019-01-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745836 SAMN22605093 1441287 mouse metagenome ['Liver sample of "A1" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.3.3 cohousing_set-up Cohousing set-up "A1", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Liver collection_date 2018-12-27 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745837 SAMN22605094 1441287 mouse metagenome ['Small intestine sample of "A1" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.3.2 cohousing_set-up Cohousing set-up "A1", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine collection_date 2018-12-27 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745838 SAMN22605096 1441287 mouse metagenome ['Spleen/lymph node sample of "A1" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.3.1 cohousing_set-up Cohousing set-up "A1", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-12-27 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745839 SAMN22605098 1441287 mouse metagenome ['Small intestine sample of "A2" cohousing set-up, animal 1 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.8.2 cohousing_set-up Cohousing set-up "A2" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745840 SAMN22605097 1441287 mouse metagenome ['Liver sample of "A2" cohousing set-up, animal 1 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.8.3 cohousing_set-up Cohousing set-up "A2" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745841 SAMN22605100 1441287 mouse metagenome ['Spleen/lymph node sample of "A2" cohousing set-up, animal 1 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.8.1 cohousing_set-up Cohousing set-up "A2" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745842 SAMN22605147 1441287 mouse metagenome ['Small intestine content sample of "A3" cohousing set-up, animal 3 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.17.8 cohousing_set-up Cohousing set-up "A3" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine content collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745843 SAMN22605104 1441287 mouse metagenome ['Spleen/lymph node sample of "A2" cohousing set-up, animal 2 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.10.1 cohousing_set-up Cohousing set-up "A2" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745844 SAMN22605105 1441287 mouse metagenome ['Liver sample of "A2" cohousing set-up, animal 3 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.11.3 cohousing_set-up Cohousing set-up "A2" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Liver collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745845 SAMN22605106 1441287 mouse metagenome ['Small intestine sample of "A2" cohousing set-up, animal 3 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.11.2 cohousing_set-up Cohousing set-up "A2" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745846 SAMN22605108 1441287 mouse metagenome ['Spleen/lymph node sample of "A2" cohousing set-up, animal 3 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.11.1 cohousing_set-up Cohousing set-up "A2" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745847 SAMN22605112 1441287 mouse metagenome ['Spleen/lymph node sample of "A2" cohousing set-up, animal 4 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.12.1 cohousing_set-up Cohousing set-up "A2" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745848 SAMN22605113 1441287 mouse metagenome ['Liver sample of "A2" cohousing set-up, animal 5 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.13.3 cohousing_set-up Cohousing set-up "A2" animal_number 5 host_genotype Outbred mouse from pet store A host_tissue_sampled Liver collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745849 SAMN22605151 1441287 mouse metagenome ['Small intestine content sample of "A3" cohousing set-up, animal 4 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.18.8 cohousing_set-up Cohousing set-up "A3" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine content collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745850 SAMN22605116 1441287 mouse metagenome ['Spleen/lymph node sample of "A2" cohousing set-up, animal 5 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.13.1 cohousing_set-up Cohousing set-up "A2" animal_number 5 host_genotype Outbred mouse from pet store A host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745851 SAMN22605117 1441287 mouse metagenome ['Liver sample of "A2" cohousing set-up, animal 6 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.14.3 cohousing_set-up Cohousing set-up "A2" animal_number 6 host_genotype Outbred mouse from pet store B host_tissue_sampled Liver collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745852 SAMN22605121 1441287 mouse metagenome ['Liver sample of "A2" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.13.3 cohousing_set-up Cohousing set-up "A2", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745853 SAMN22605120 1441287 mouse metagenome ['Spleen/lymph node sample of "A2" cohousing set-up, animal 6 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.14.1 cohousing_set-up Cohousing set-up "A2" animal_number 6 host_genotype Outbred mouse from pet store B host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-02-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745854 SAMN22605122 1441287 mouse metagenome ['Small intestine sample of "A2" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.13.2 cohousing_set-up Cohousing set-up "A2", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745855 SAMN22605124 1441287 mouse metagenome ['Spleen/lymph node sample of "A2" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.13.1 cohousing_set-up Cohousing set-up "A2", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745856 SAMN22605125 1441287 mouse metagenome ['Liver sample of "A2" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.10.3 cohousing_set-up Cohousing set-up "A2", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Liver collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745857 SAMN22605126 1441287 mouse metagenome ['Small intestine sample of "A2" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.10.2 cohousing_set-up Cohousing set-up "A2", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745858 SAMN22605128 1441287 mouse metagenome ['Spleen/lymph node sample of "A2" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.10.1 cohousing_set-up Cohousing set-up "A2", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745859 SAMN22605155 1441287 mouse metagenome ['Small intestine content sample of "A3" cohousing set-up, animal 5 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.19.8 cohousing_set-up Cohousing set-up "A3" animal_number 5 host_genotype Outbred mouse from pet store B host_tissue_sampled Small intestine content collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745860 SAMN22605129 1441287 mouse metagenome ['Liver sample of "A2" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.8.3 cohousing_set-up Cohousing set-up "A2", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Liver collection_date 2019-01-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745861 SAMN22605130 1441287 mouse metagenome ['Small intestine sample of "A2" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.8.2 cohousing_set-up Cohousing set-up "A2", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine collection_date 2019-01-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745862 SAMN22605133 1441287 mouse metagenome ['Liver sample of "A2" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.4.3 cohousing_set-up Cohousing set-up "A2", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Liver collection_date 2018-12-27 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745863 SAMN22605132 1441287 mouse metagenome ['Spleen/lymph node sample of "A2" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.8.1 cohousing_set-up Cohousing set-up "A2", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-01-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745864 SAMN22605134 1441287 mouse metagenome ['Small intestine sample of "A2" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.4.2 cohousing_set-up Cohousing set-up "A2", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine collection_date 2018-12-27 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745865 SAMN22605136 1441287 mouse metagenome ['Spleen/lymph node sample of "A2" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.4.1 cohousing_set-up Cohousing set-up "A2", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-12-27 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745866 SAMN22605137 1441287 mouse metagenome ['Liver sample of "A3" cohousing set-up, animal 1 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.15.3 cohousing_set-up Cohousing set-up "A3" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745867 SAMN22605138 1441287 mouse metagenome ['Small intestine sample of "A3" cohousing set-up, animal 1 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.15.2 cohousing_set-up Cohousing set-up "A3" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745868 SAMN22605140 1441287 mouse metagenome ['Spleen/lymph node sample of "A3" cohousing set-up, animal 1 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.15.1 cohousing_set-up Cohousing set-up "A3" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745869 SAMN22605159 1441287 mouse metagenome ['Small intestine content sample of "A3" cohousing set-up, animal 6 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.20.8 cohousing_set-up Cohousing set-up "A3" animal_number 6 host_genotype Outbred mouse from pet store A host_tissue_sampled Small intestine content collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745870 SAMN22605141 1441287 mouse metagenome ['Liver sample of "A3" cohousing set-up, animal 2 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.16.3 cohousing_set-up Cohousing set-up "A3" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Liver collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745871 SAMN22605144 1441287 mouse metagenome ['Spleen/lymph node sample of "A3" cohousing set-up, animal 2 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.16.1 cohousing_set-up Cohousing set-up "A3" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745872 SAMN22605142 1441287 mouse metagenome ['Small intestine sample of "A3" cohousing set-up, animal 2 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.16.2 cohousing_set-up Cohousing set-up "A3" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745873 SAMN22605145 1441287 mouse metagenome ['Liver sample of "A3" cohousing set-up, animal 3 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.17.3 cohousing_set-up Cohousing set-up "A3" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Liver collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745874 SAMN22605146 1441287 mouse metagenome ['Small intestine sample of "A3" cohousing set-up, animal 3 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.17.2 cohousing_set-up Cohousing set-up "A3" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745875 SAMN22605148 1441287 mouse metagenome ['Spleen/lymph node sample of "A3" cohousing set-up, animal 3 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.17.1 cohousing_set-up Cohousing set-up "A3" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745876 SAMN22605152 1441287 mouse metagenome ['Spleen/lymph node sample of "A3" cohousing set-up, animal 4 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.18.1 cohousing_set-up Cohousing set-up "A3" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745877 SAMN22605149 1441287 mouse metagenome ['Liver sample of "A3" cohousing set-up, animal 4 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.18.3 cohousing_set-up Cohousing set-up "A3" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Liver collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745878 SAMN22605150 1441287 mouse metagenome ['Small intestine sample of "A3" cohousing set-up, animal 4 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.18.2 cohousing_set-up Cohousing set-up "A3" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745879 SAMN22605153 1441287 mouse metagenome ['Liver sample of "A3" cohousing set-up, animal 5 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.19.3 cohousing_set-up Cohousing set-up "A3" animal_number 5 host_genotype Outbred mouse from pet store B host_tissue_sampled Liver collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745880 SAMN22605163 1441287 mouse metagenome ['Small intestine content sample of "A3" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.14.1 cohousing_set-up Cohousing set-up "A3", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine content collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745881 SAMN22605154 1441287 mouse metagenome ['Small intestine sample of "A3" cohousing set-up, animal 5 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.19.2 cohousing_set-up Cohousing set-up "A3" animal_number 5 host_genotype Outbred mouse from pet store B host_tissue_sampled Small intestine collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745882 SAMN22605156 1441287 mouse metagenome ['Spleen/lymph node sample of "A3" cohousing set-up, animal 5 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.19.1 cohousing_set-up Cohousing set-up "A3" animal_number 5 host_genotype Outbred mouse from pet store B host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745883 SAMN22605157 1441287 mouse metagenome ['Liver sample of "A3" cohousing set-up, animal 6 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.20.3 cohousing_set-up Cohousing set-up "A3" animal_number 6 host_genotype Outbred mouse from pet store A host_tissue_sampled Liver collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745884 SAMN22605158 1441287 mouse metagenome ['Small intestine sample of "A3" cohousing set-up, animal 6 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.20.2 cohousing_set-up Cohousing set-up "A3" animal_number 6 host_genotype Outbred mouse from pet store A host_tissue_sampled Small intestine collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745885 SAMN22605160 1441287 mouse metagenome ['Spleen/lymph node sample of "A3" cohousing set-up, animal 6 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.20.1 cohousing_set-up Cohousing set-up "A3" animal_number 6 host_genotype Outbred mouse from pet store A host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-02-26 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745886 SAMN22605161 1441287 mouse metagenome ['Liver sample of "A3" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.14.3 cohousing_set-up Cohousing set-up "A3", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745887 SAMN22605162 1441287 mouse metagenome ['Small intestine sample of "A3" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.14.2 cohousing_set-up Cohousing set-up "A3", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745888 SAMN22605164 1441287 mouse metagenome ['Spleen/lymph node sample of "A3" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.14.8 cohousing_set-up Cohousing set-up "A3", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745889 SAMN22605165 1441287 mouse metagenome ['Liver sample of "A3" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.11.3 cohousing_set-up Cohousing set-up "A3", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Liver collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745890 SAMN22605168 1441287 mouse metagenome ['Spleen/lymph node sample of "A3" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.11.1 cohousing_set-up Cohousing set-up "A3", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745891 SAMN22605166 1441287 mouse metagenome ['Small intestine sample of "A3" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.11.2 cohousing_set-up Cohousing set-up "A3", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745892 SAMN22605167 1441287 mouse metagenome ['Small intestine content sample of "A3" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.11.8 cohousing_set-up Cohousing set-up "A3", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine content collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745893 SAMN22605169 1441287 mouse metagenome ['Liver sample of "A3" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.9.3 cohousing_set-up Cohousing set-up "A3", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Liver collection_date 2019-01-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745894 SAMN22605170 1441287 mouse metagenome ['Small intestine sample of "A3" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.9.2 cohousing_set-up Cohousing set-up "A3", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine collection_date 2019-01-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745895 SAMN22605172 1441287 mouse metagenome ['Spleen/lymph node sample of "A3" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.9.1 cohousing_set-up Cohousing set-up "A3", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Pooled spleen and lymph nodes collection_date 2019-01-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745896 SAMN22605173 1441287 mouse metagenome ['Liver sample of "A3" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.5.3 cohousing_set-up Cohousing set-up "A3", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Liver collection_date 2018-12-27 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745897 SAMN22605174 1441287 mouse metagenome ['Small intestine sample of "A3" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.5.2 cohousing_set-up Cohousing set-up "A3", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine collection_date 2018-12-27 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745898 SAMN22605176 1441287 mouse metagenome ['Spleen/lymph node sample of "A3" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.5.1 cohousing_set-up Cohousing set-up "A3", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-12-27 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745899 SAMN22605177 1441287 mouse metagenome ['Liver sample of "A4" cohousing set-up, animal 1 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.1.3 cohousing_set-up Cohousing set-up "A4" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745900 SAMN22605180 1441287 mouse metagenome ['Spleen/lymph node sample of "A4" cohousing set-up, animal 1 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.1.1 cohousing_set-up Cohousing set-up "A4" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745901 SAMN22605178 1441287 mouse metagenome ['Small intestine sample of "A4" cohousing set-up, animal 1 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.1.2 cohousing_set-up Cohousing set-up "A4" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745902 SAMN22605181 1441287 mouse metagenome ['Liver sample of "A4" cohousing set-up, animal 2 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.2.3 cohousing_set-up Cohousing set-up "A4" animal_number 2 host_genotype Ifnar1-/- x Foxp3-GFP host_tissue_sampled Liver collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745903 SAMN22605171 1441287 mouse metagenome ['Small intestine content sample of "A3" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.9.8 cohousing_set-up Cohousing set-up "A3", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine content collection_date 2019-01-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745904 SAMN22605182 1441287 mouse metagenome ['Small intestine sample of "A4" cohousing set-up, animal 2 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.2.2 cohousing_set-up Cohousing set-up "A4" animal_number 2 host_genotype Ifnar1-/- x Foxp3-GFP host_tissue_sampled Small intestine collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745905 SAMN22605184 1441287 mouse metagenome ['Spleen/lymph node sample of "A4" cohousing set-up, animal 2 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.2.1 cohousing_set-up Cohousing set-up "A4" animal_number 2 host_genotype Ifnar1-/- x Foxp3-GFP host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745906 SAMN22605185 1441287 mouse metagenome ['Liver sample of "A4" cohousing set-up, animal 3 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.3.3 cohousing_set-up Cohousing set-up "A4" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Liver collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745907 SAMN22605186 1441287 mouse metagenome ['Small intestine sample of "A4" cohousing set-up, animal 3 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.3.2 cohousing_set-up Cohousing set-up "A4" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745908 SAMN22605188 1441287 mouse metagenome ['Spleen/lymph node sample of "A4" cohousing set-up, animal 3 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.3.1 cohousing_set-up Cohousing set-up "A4" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745909 SAMN22605189 1441287 mouse metagenome ['Liver sample of "A4" cohousing set-up, animal 4 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.4.3 cohousing_set-up Cohousing set-up "A4" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Liver collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745910 SAMN22605193 1441287 mouse metagenome ['Liver sample of "A4" cohousing set-up, animal 5 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.5.3 cohousing_set-up Cohousing set-up "A4" animal_number 5 host_genotype Outbred mouse from pet store B host_tissue_sampled Liver collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745911 SAMN22605190 1441287 mouse metagenome ['Small intestine sample of "A4" cohousing set-up, animal 4 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.4.2 cohousing_set-up Cohousing set-up "A4" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745912 SAMN22605192 1441287 mouse metagenome ['Spleen/lymph node sample of "A4" cohousing set-up, animal 4 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.4.1 cohousing_set-up Cohousing set-up "A4" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745913 SAMN22605194 1441287 mouse metagenome ['Small intestine sample of "A4" cohousing set-up, animal 5 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.5.2 cohousing_set-up Cohousing set-up "A4" animal_number 5 host_genotype Outbred mouse from pet store B host_tissue_sampled Small intestine collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745914 SAMN22605175 1441287 mouse metagenome ['Small intestine content sample of "A3" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.5.8 cohousing_set-up Cohousing set-up "A3", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine content collection_date 2018-12-27 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745915 SAMN22605196 1441287 mouse metagenome ['Spleen/lymph node sample of "A4" cohousing set-up, animal 5 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.5.1 cohousing_set-up Cohousing set-up "A4" animal_number 5 host_genotype Outbred mouse from pet store B host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745916 SAMN22605197 1441287 mouse metagenome ['Liver sample of "A4" cohousing set-up, animal 6 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.6.3 cohousing_set-up Cohousing set-up "A4" animal_number 6 host_genotype Outbred mouse from pet store C host_tissue_sampled Liver collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745917 SAMN22605198 1441287 mouse metagenome ['Small intestine sample of "A4" cohousing set-up, animal 6 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.6.2 cohousing_set-up Cohousing set-up "A4" animal_number 6 host_genotype Outbred mouse from pet store C host_tissue_sampled Small intestine collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745918 SAMN22605201 1441287 mouse metagenome ['Liver sample of "A4" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AG07c.7.3 cohousing_set-up Cohousing set-up "A4", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2020-05-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745919 SAMN22605200 1441287 mouse metagenome ['Spleen/lymph node sample of "A4" cohousing set-up, animal 6 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.6.1 cohousing_set-up Cohousing set-up "A4" animal_number 6 host_genotype Outbred mouse from pet store C host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745920 SAMN22605202 1441287 mouse metagenome ['Small intestine sample of "A4" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AG07c.7.2 cohousing_set-up Cohousing set-up "A4", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2020-05-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745921 SAMN22605204 1441287 mouse metagenome ['Spleen/lymph node sample of "A4" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AG07c.7.1 cohousing_set-up Cohousing set-up "A4", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-05-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745922 SAMN22605205 1441287 mouse metagenome ['Liver sample of "A4" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AG07c.8.3 cohousing_set-up Cohousing set-up "A4", SPF control animal_number 2 host_genotype Ifnar1-/- x Foxp3-GFP host_tissue_sampled Liver collection_date 2020-05-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745923 SAMN22605206 1441287 mouse metagenome ['Small intestine sample of "A4" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AG07c.8.2 cohousing_set-up Cohousing set-up "A4", SPF control animal_number 2 host_genotype Ifnar1-/- x Foxp3-GFP host_tissue_sampled Small intestine collection_date 2020-05-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745924 SAMN22605208 1441287 mouse metagenome ['Spleen/lymph node sample of "A4" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AG07c.8.1 cohousing_set-up Cohousing set-up "A4", SPF control animal_number 2 host_genotype Ifnar1-/- x Foxp3-GFP host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-05-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745925 SAMN22605071 1441287 mouse metagenome ['Small intestine content sample of "A1" cohousing set-up, animal 4 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.5.8 cohousing_set-up Cohousing set-up "A1" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine content collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745926 SAMN22605179 1441287 mouse metagenome ['Small intestine content sample of "A4" cohousing set-up, animal 1 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.1.8 cohousing_set-up Cohousing set-up "A4" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine content collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745927 SAMN22605209 1441287 mouse metagenome ['Liver sample of "A4" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AG07c.9.3 cohousing_set-up Cohousing set-up "A4", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Liver collection_date 2020-05-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745928 SAMN22605210 1441287 mouse metagenome ['Small intestine sample of "A4" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AG07c.9.2 cohousing_set-up Cohousing set-up "A4", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine collection_date 2020-05-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745929 SAMN22605213 1441287 mouse metagenome ['Liver sample of "A4" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AG07c.10.3 cohousing_set-up Cohousing set-up "A4", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Liver collection_date 2020-05-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745930 SAMN22605212 1441287 mouse metagenome ['Spleen/lymph node sample of "A4" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AG07c.9.1 cohousing_set-up Cohousing set-up "A4", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-05-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745931 SAMN22605214 1441287 mouse metagenome ['Small intestine sample of "A4" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AG07c.10.2 cohousing_set-up Cohousing set-up "A4", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine collection_date 2020-05-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745932 SAMN22605216 1441287 mouse metagenome ['Spleen/lymph node sample of "A4" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AG07c.10.1 cohousing_set-up Cohousing set-up "A4", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-05-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745933 SAMN22605220 1441287 mouse metagenome ['Spleen/lymph node sample of "B1" cohousing set-up, animal 1 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.1.1 cohousing_set-up Cohousing set-up "B1" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745934 SAMN22605183 1441287 mouse metagenome ['Small intestine content sample of "A4" cohousing set-up, animal 2 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.2.8 cohousing_set-up Cohousing set-up "A4" animal_number 2 host_genotype Ifnar1-/- x Foxp3-GFP host_tissue_sampled Small intestine content collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745935 SAMN22605221 1441287 mouse metagenome ['Liver sample of "B1" cohousing set-up, animal 2 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.2.3 cohousing_set-up Cohousing set-up "B1" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Liver collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745936 SAMN22605224 1441287 mouse metagenome ['Spleen/lymph node sample of "B1" cohousing set-up, animal 2 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.2.1 cohousing_set-up Cohousing set-up "B1" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745937 SAMN22605225 1441287 mouse metagenome ['Liver sample of "B1" cohousing set-up, animal 3 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.3.3 cohousing_set-up Cohousing set-up "B1" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Liver collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745938 SAMN22605228 1441287 mouse metagenome ['Spleen/lymph node sample of "B1" cohousing set-up, animal 3 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.3.1 cohousing_set-up Cohousing set-up "B1" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745939 SAMN22605229 1441287 mouse metagenome ['Liver sample of "B1" cohousing set-up, animal 4 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.4.3 cohousing_set-up Cohousing set-up "B1" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Liver collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745940 SAMN22605232 1441287 mouse metagenome ['Spleen/lymph node sample of "B1" cohousing set-up, animal 4 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.4.1 cohousing_set-up Cohousing set-up "B1" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745941 SAMN22605187 1441287 mouse metagenome ['Small intestine content sample of "A4" cohousing set-up, animal 3 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.3.8 cohousing_set-up Cohousing set-up "A4" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine content collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745942 SAMN22605233 1441287 mouse metagenome ['Liver sample of "B1" cohousing set-up, animal 5 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.5.3 cohousing_set-up Cohousing set-up "B1" animal_number 5 host_genotype Outbred mouse from pet store C host_tissue_sampled Liver collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745943 SAMN22605236 1441287 mouse metagenome ['Spleen/lymph node sample of "B1" cohousing set-up, animal 5 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.5.1 cohousing_set-up Cohousing set-up "B1" animal_number 5 host_genotype Outbred mouse from pet store C host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745944 SAMN22605237 1441287 mouse metagenome ['Liver sample of "B1" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04c.11.3 cohousing_set-up Cohousing set-up "B1", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2020-09-04 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745945 SAMN22605240 1441287 mouse metagenome ['Spleen/lymph node sample of "B1" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04c.11.1 cohousing_set-up Cohousing set-up "B1", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-09-04 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745946 SAMN22605241 1441287 mouse metagenome ['Liver sample of "B1" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04c.12.3 cohousing_set-up Cohousing set-up "B1", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Liver collection_date 2020-09-04 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745947 SAMN22605238 1441287 mouse metagenome ['Small intestine sample of "B1" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04c.11.2 cohousing_set-up Cohousing set-up "B1", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2020-09-04 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745948 SAMN22605244 1441287 mouse metagenome ['Spleen/lymph node sample of "B1" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04c.12.1 cohousing_set-up Cohousing set-up "B1", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-09-04 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745949 SAMN22605245 1441287 mouse metagenome ['Liver sample of "B1" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04c.13.3 cohousing_set-up Cohousing set-up "B1", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Liver collection_date 2020-09-04 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745950 SAMN22605242 1441287 mouse metagenome ['Small intestine sample of "B1" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04c.12.2 cohousing_set-up Cohousing set-up "B1", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2020-09-04 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745951 SAMN22605246 1441287 mouse metagenome ['Small intestine sample of "B1" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04c.13.2 cohousing_set-up Cohousing set-up "B1", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine collection_date 2020-09-04 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745952 SAMN22605248 1441287 mouse metagenome ['Spleen/lymph node sample of "B1" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04c.13.1 cohousing_set-up Cohousing set-up "B1", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-09-04 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745953 SAMN22605191 1441287 mouse metagenome ['Small intestine content sample of "A4" cohousing set-up, animal 4 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.4.8 cohousing_set-up Cohousing set-up "A4" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine content collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745954 SAMN22605249 1441287 mouse metagenome ['Liver sample of "B1" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04c.14.3 cohousing_set-up Cohousing set-up "B1", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Liver collection_date 2020-09-04 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745955 SAMN22605250 1441287 mouse metagenome ['Small intestine sample of "B1" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04c.14.2 cohousing_set-up Cohousing set-up "B1", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine collection_date 2020-09-04 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745956 SAMN22605252 1441287 mouse metagenome ['Spleen/lymph node sample of "B1" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04c.14.1 cohousing_set-up Cohousing set-up "B1", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-09-04 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745957 SAMN22605253 1441287 mouse metagenome ['Liver sample of "B2" cohousing set-up, animal 1 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.6.3 cohousing_set-up Cohousing set-up "B2" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745958 SAMN22605256 1441287 mouse metagenome ['Spleen/lymph node sample of "B2" cohousing set-up, animal 1 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.6.1 cohousing_set-up Cohousing set-up "B2" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745959 SAMN22605254 1441287 mouse metagenome ['Small intestine sample of "B2" cohousing set-up, animal 1 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.6.2 cohousing_set-up Cohousing set-up "B2" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745960 SAMN22605257 1441287 mouse metagenome ['Liver sample of "B2" cohousing set-up, animal 2 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.7.3 cohousing_set-up Cohousing set-up "B2" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Liver collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745961 SAMN22605260 1441287 mouse metagenome ['Spleen/lymph node sample of "B2" cohousing set-up, animal 2 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.7.1 cohousing_set-up Cohousing set-up "B2" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745962 SAMN22605261 1441287 mouse metagenome ['Liver sample of "B2" cohousing set-up, animal 3 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.8.3 cohousing_set-up Cohousing set-up "B2" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Liver collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745963 SAMN22605195 1441287 mouse metagenome ['Small intestine content sample of "A4" cohousing set-up, animal 5 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.5.8 cohousing_set-up Cohousing set-up "A4" animal_number 5 host_genotype Outbred mouse from pet store B host_tissue_sampled Small intestine content collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745964 SAMN22605264 1441287 mouse metagenome ['Spleen/lymph node sample of "B2" cohousing set-up, animal 3 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.8.1 cohousing_set-up Cohousing set-up "B2" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745965 SAMN22605265 1441287 mouse metagenome ['Liver sample of "B2" cohousing set-up, animal 4 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.9.3 cohousing_set-up Cohousing set-up "B2" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Liver collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745966 SAMN22605268 1441287 mouse metagenome ['Spleen/lymph node sample of "B2" cohousing set-up, animal 4 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.9.1 cohousing_set-up Cohousing set-up "B2" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745967 SAMN22605269 1441287 mouse metagenome ['Liver sample of "B2" cohousing set-up, animal 5 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.10.3 cohousing_set-up Cohousing set-up "B2" animal_number 5 host_genotype Outbred mouse from pet store B host_tissue_sampled Liver collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745968 SAMN22605199 1441287 mouse metagenome ['Small intestine content sample of "A4" cohousing set-up, animal 6 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AG07.6.8 cohousing_set-up Cohousing set-up "A4" animal_number 6 host_genotype Outbred mouse from pet store C host_tissue_sampled Small intestine content collection_date 2020-05-16 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745969 SAMN22605272 1441287 mouse metagenome ['Spleen/lymph node sample of "B2" cohousing set-up, animal 5 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.10.1 cohousing_set-up Cohousing set-up "B2" animal_number 5 host_genotype Outbred mouse from pet store B host_tissue_sampled Pooled spleen and lymph nodes collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745970 SAMN22605273 1441287 mouse metagenome ['Liver sample of "C1" cohousing set-up, animal 1 of 3', ''] bioproject 775628 PRJNA775628 Sample_ID AK02.1.3 cohousing_set-up Cohousing set-up "C1" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2018-10-17 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745971 SAMN22605275 1441287 mouse metagenome ['Spleen/lymph node sample of "C1" cohousing set-up, animal 1 of 3', ''] bioproject 775628 PRJNA775628 Sample_ID AK02.1.1 cohousing_set-up Cohousing set-up "C1" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-10-17 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745972 SAMN22605276 1441287 mouse metagenome ['Liver sample of "C1" cohousing set-up, animal 2 of 3', ''] bioproject 775628 PRJNA775628 Sample_ID AK02.3.3 cohousing_set-up Cohousing set-up "C1" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Liver collection_date 2018-10-17 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745973 SAMN22605278 1441287 mouse metagenome ['Spleen/lymph node sample of "C1" cohousing set-up, animal 2 of 3', ''] bioproject 775628 PRJNA775628 Sample_ID AK02.3.1 cohousing_set-up Cohousing set-up "C1" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-10-17 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745974 SAMN22605279 1441287 mouse metagenome ['Liver sample of "C1" cohousing set-up, animal 3 of 3', ''] bioproject 775628 PRJNA775628 Sample_ID AK02.4.3 cohousing_set-up Cohousing set-up "C1" animal_number 3 host_genotype Outbred mouse from pet store A host_tissue_sampled Liver collection_date 2018-10-17 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745975 SAMN22605281 1441287 mouse metagenome ['Spleen/lymph node sample of "C1" cohousing set-up, animal 3 of 3', ''] bioproject 775628 PRJNA775628 Sample_ID AK02.4.1 cohousing_set-up Cohousing set-up "C1" animal_number 3 host_genotype Outbred mouse from pet store A host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-10-17 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745976 SAMN22605282 1441287 mouse metagenome ['Liver sample of "C1" cohousing set-up matched controls, animal 1 of 2', ''] bioproject 775628 PRJNA775628 Sample_ID AK02c.1.3 cohousing_set-up Cohousing set-up "C1", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2018-10-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745977 SAMN22605283 1441287 mouse metagenome ['Small intestine sample of "C1" cohousing set-up matched controls, animal 1 of 2', ''] bioproject 775628 PRJNA775628 Sample_ID AK02c.1.2 cohousing_set-up Cohousing set-up "C1", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2018-10-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745978 SAMN22605203 1441287 mouse metagenome ['Small intestine content sample of "A4" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AG07c.7.8 cohousing_set-up Cohousing set-up "A4", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine content collection_date 2020-05-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745979 SAMN22605284 1441287 mouse metagenome ['Spleen/lymph node sample of "C1" cohousing set-up matched controls, animal 1 of 2', ''] bioproject 775628 PRJNA775628 Sample_ID AK02c.1.1 cohousing_set-up Cohousing set-up "C1", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-10-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745980 SAMN22605285 1441287 mouse metagenome ['Liver sample of "C1" cohousing set-up matched controls, animal 2 of 2', ''] bioproject 775628 PRJNA775628 Sample_ID AK02c.4.3 cohousing_set-up Cohousing set-up "C1", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Liver collection_date 2018-10-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745981 SAMN22605286 1441287 mouse metagenome ['Small intestine sample of "C1" cohousing set-up matched controls, animal 2 of 2', ''] bioproject 775628 PRJNA775628 Sample_ID AK02c.4.2 cohousing_set-up Cohousing set-up "C1", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2018-10-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745982 SAMN22605288 1441287 mouse metagenome ['Liver sample of "C2" cohousing set-up, animal 1 of 3', ''] bioproject 775628 PRJNA775628 Sample_ID AK02.5.3 cohousing_set-up Cohousing set-up "C2" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2018-10-17 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745983 SAMN22605287 1441287 mouse metagenome ['Spleen/lymph node sample of "C1" cohousing set-up matched controls, animal 2 of 2', ''] bioproject 775628 PRJNA775628 Sample_ID AK02c.4.1 cohousing_set-up Cohousing set-up "C1", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-10-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745984 SAMN22605289 1441287 mouse metagenome ['Small intestine sample of "C2" cohousing set-up, animal 1 of 3', ''] bioproject 775628 PRJNA775628 Sample_ID AK02.5.2 cohousing_set-up Cohousing set-up "C2" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2018-10-17 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745985 SAMN22605290 1441287 mouse metagenome ['Spleen/lymph node sample of "C2" cohousing set-up, animal 1 of 3', ''] bioproject 775628 PRJNA775628 Sample_ID AK02.5.1 cohousing_set-up Cohousing set-up "C2" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-10-17 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745986 SAMN22605292 1441287 mouse metagenome ['Small intestine sample of "C2" cohousing set-up, animal 2 of 3', ''] bioproject 775628 PRJNA775628 Sample_ID AK02.7.2 cohousing_set-up Cohousing set-up "C2" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2018-10-17 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745987 SAMN22605291 1441287 mouse metagenome ['Liver sample of "C2" cohousing set-up, animal 2 of 3', ''] bioproject 775628 PRJNA775628 Sample_ID AK02.7.3 cohousing_set-up Cohousing set-up "C2" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Liver collection_date 2018-10-17 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745988 SAMN22605207 1441287 mouse metagenome ['Small intestine content sample of "A4" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AG07c.8.8 cohousing_set-up Cohousing set-up "A4", SPF control animal_number 2 host_genotype Ifnar1-/- x Foxp3-GFP host_tissue_sampled Small intestine content collection_date 2020-05-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745989 SAMN22605295 1441287 mouse metagenome ['Small intestine sample of "C2" cohousing set-up, animal 3 of 3', ''] bioproject 775628 PRJNA775628 Sample_ID AK02.8.2 cohousing_set-up Cohousing set-up "C2" animal_number 3 host_genotype Outbred mouse from pet store A host_tissue_sampled Small intestine collection_date 2018-10-17 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745990 SAMN22605294 1441287 mouse metagenome ['Liver sample of "C2" cohousing set-up, animal 3 of 3', ''] bioproject 775628 PRJNA775628 Sample_ID AK02.8.3 cohousing_set-up Cohousing set-up "C2" animal_number 3 host_genotype Outbred mouse from pet store A host_tissue_sampled Liver collection_date 2018-10-17 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745991 SAMN22605293 1441287 mouse metagenome ['Spleen/lymph node sample of "C2" cohousing set-up, animal 2 of 3', ''] bioproject 775628 PRJNA775628 Sample_ID AK02.7.1 cohousing_set-up Cohousing set-up "C2" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-10-17 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745992 SAMN22605296 1441287 mouse metagenome ['Spleen/lymph node sample of "C2" cohousing set-up, animal 3 of 3', ''] bioproject 775628 PRJNA775628 Sample_ID AK02.8.1 cohousing_set-up Cohousing set-up "C2" animal_number 3 host_genotype Outbred mouse from pet store A host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-10-17 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745993 SAMN22605297 1441287 mouse metagenome ['Liver sample of "C2" cohousing set-up matched controls, animal 1 of 2', ''] bioproject 775628 PRJNA775628 Sample_ID AK02c.2.3 cohousing_set-up Cohousing set up "C2", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2018-10-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745994 SAMN22605298 1441287 mouse metagenome ['Small intestine sample of "C2" cohousing set-up matched controls, animal 1 of 2', ''] bioproject 775628 PRJNA775628 Sample_ID AK02c.2.2 cohousing_set-up Cohousing set up "C2", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2018-10-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745995 SAMN22605299 1441287 mouse metagenome ['Spleen/lymph node sample of "C2" cohousing set-up matched controls, animal 1 of 2', ''] bioproject 775628 PRJNA775628 Sample_ID AK02c.2.1 cohousing_set-up Cohousing set up "C2", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-10-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745996 SAMN22605300 1441287 mouse metagenome ['Liver sample of "C2" cohousing set-up matched controls, animal 2 of 2', ''] bioproject 775628 PRJNA775628 Sample_ID AK02c.5.3 cohousing_set-up Cohousing set up "C2", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Liver collection_date 2018-10-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745997 SAMN22605211 1441287 mouse metagenome ['Small intestine content sample of "A4" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AG07c.9.8 cohousing_set-up Cohousing set-up "A4", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine content collection_date 2020-05-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745998 SAMN22605301 1441287 mouse metagenome ['Small intestine sample of "C2" cohousing set-up matched controls, animal 2 of 2', ''] bioproject 775628 PRJNA775628 Sample_ID AK02c.5.2 cohousing_set-up Cohousing set up "C2", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2018-10-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10745999 SAMN22605302 1441287 mouse metagenome ['Spleen/lymph node sample of "C2" cohousing set-up matched controls, animal 2 of 2', ''] bioproject 775628 PRJNA775628 Sample_ID AK02c.5.1 cohousing_set-up Cohousing set up "C2", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-10-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746000 SAMN22605303 1441287 mouse metagenome ['Liver sample of "D1" cohousing set-up, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.1.3 cohousing_set-up Cohousing set up "D1" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746001 SAMN22605304 1441287 mouse metagenome ['Small intestine sample of "D1" cohousing set-up, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.1.2 cohousing_set-up Cohousing set up "D1" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746002 SAMN22605305 1441287 mouse metagenome ['Spleen/lymph node sample of "D1" cohousing set-up, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.1.1 cohousing_set-up Cohousing set up "D1" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746003 SAMN22605306 1441287 mouse metagenome ['Liver sample of "D1" cohousing set-up, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.3.3 cohousing_set-up Cohousing set up "D1" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Liver collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746004 SAMN22605307 1441287 mouse metagenome ['Small intestine sample of "D1" cohousing set-up, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.3.2 cohousing_set-up Cohousing set up "D1" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746005 SAMN22605308 1441287 mouse metagenome ['Spleen/lymph node sample of "D1" cohousing set-up, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.3.1 cohousing_set-up Cohousing set up "D1" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746006 SAMN22605309 1441287 mouse metagenome ['Liver sample of "D1" cohousing set-up, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.4.3 cohousing_set-up Cohousing set up "D1" animal_number 3 host_genotype Outbred mouse from pet store A host_tissue_sampled Liver collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746007 SAMN22605215 1441287 mouse metagenome ['Small intestine content sample of "A4" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AG07c.10.8 cohousing_set-up Cohousing set-up "A4", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine content collection_date 2020-05-20 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746008 SAMN22605310 1441287 mouse metagenome ['Small intestine sample of "D1" cohousing set-up, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.4.2 cohousing_set-up Cohousing set up "D1" animal_number 3 host_genotype Outbred mouse from pet store A host_tissue_sampled Small intestine collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746009 SAMN22605311 1441287 mouse metagenome ['Spleen/lymph node sample of "D1" cohousing set-up, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.4.1 cohousing_set-up Cohousing set up "D1" animal_number 3 host_genotype Outbred mouse from pet store A host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746010 SAMN22605312 1441287 mouse metagenome ['Liver sample of "D1" cohousing set-up, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.5.3 cohousing_set-up Cohousing set up "D1" animal_number 4 host_genotype Outbred mouse from pet store A host_tissue_sampled Liver collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746011 SAMN22605313 1441287 mouse metagenome ['Small intestine sample of "D1" cohousing set-up, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.5.2 cohousing_set-up Cohousing set up "D1" animal_number 4 host_genotype Outbred mouse from pet store A host_tissue_sampled Small intestine collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746012 SAMN22605314 1441287 mouse metagenome ['Spleen/lymph node sample of "D1" cohousing set-up, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.5.1 cohousing_set-up Cohousing set up "D1" animal_number 4 host_genotype Outbred mouse from pet store A host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746013 SAMN22605315 1441287 mouse metagenome ['Liver sample of "D2" cohousing set-up, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.6.3 cohousing_set-up Cohousing set up "D2" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746014 SAMN22605316 1441287 mouse metagenome ['Small intestine sample of "D2" cohousing set-up, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.6.2 cohousing_set-up Cohousing set up "D2" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746015 SAMN22605317 1441287 mouse metagenome ['Spleen/lymph node sample of "D2" cohousing set-up, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.6.1 cohousing_set-up Cohousing set up "D2" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746016 SAMN22605318 1441287 mouse metagenome ['Liver sample of "D2" cohousing set-up, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.8.3 cohousing_set-up Cohousing set up "D2" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Liver collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746017 SAMN22605319 1441287 mouse metagenome ['Small intestine sample of "D2" cohousing set-up, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.8.2 cohousing_set-up Cohousing set up "D2" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746018 SAMN22605075 1441287 mouse metagenome ['Small intestine content sample of "A1" cohousing set-up, animal 5 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.6.8 cohousing_set-up Cohousing set-up "A1" animal_number 5 host_genotype Outbred mouse from pet store A host_tissue_sampled Small intestine content collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746019 SAMN22605219 1441287 mouse metagenome ['Small intestine content sample of "B1" cohousing set-up, animal 1 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.1.8 cohousing_set-up Cohousing set-up "B1" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine content collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746020 SAMN22605320 1441287 mouse metagenome ['Spleen/lymph node sample of "D2" cohousing set-up, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.8.1 cohousing_set-up Cohousing set up "D2" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746021 SAMN22605321 1441287 mouse metagenome ['Liver sample of "D2" cohousing set-up, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.9.3 cohousing_set-up Cohousing set up "D2" animal_number 3 host_genotype Outbred mouse from pet store A host_tissue_sampled Liver collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746022 SAMN22605322 1441287 mouse metagenome ['Small intestine sample of "D2" cohousing set-up, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.9.2 cohousing_set-up Cohousing set up "D2" animal_number 3 host_genotype Outbred mouse from pet store A host_tissue_sampled Small intestine collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746023 SAMN22605323 1441287 mouse metagenome ['Spleen/lymph node sample of "D2" cohousing set-up, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.9.1 cohousing_set-up Cohousing set up "D2" animal_number 3 host_genotype Outbred mouse from pet store A host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746024 SAMN22605324 1441287 mouse metagenome ['Liver sample of "D2" cohousing set-up, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.10.3 cohousing_set-up Cohousing set up "D2" animal_number 4 host_genotype Outbred mouse from pet store A host_tissue_sampled Liver collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746025 SAMN22605325 1441287 mouse metagenome ['Small intestine sample of "D2" cohousing set-up, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.10.2 cohousing_set-up Cohousing set up "D2" animal_number 4 host_genotype Outbred mouse from pet store A host_tissue_sampled Small intestine collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746026 SAMN22605326 1441287 mouse metagenome ['Spleen/lymph node sample of "D2" cohousing set-up, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK01.10.1 cohousing_set-up Cohousing set up "D2" animal_number 4 host_genotype Outbred mouse from pet store A host_tissue_sampled Pooled spleen and lymph nodes collection_date 2018-10-15 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746027 SAMN22605327 1441287 mouse metagenome ['Small intestine sample of "E1" cohousing set-up, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK03.1.2 cohousing_set-up Cohousing set up "E1" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2019-01-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746028 SAMN22605328 1441287 mouse metagenome ['Small intestine sample of "E1" cohousing set-up, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK03.3.2 cohousing_set-up Cohousing set up "E1" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2019-01-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746029 SAMN22605329 1441287 mouse metagenome ['Small intestine sample of "E1" cohousing set-up, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK03.4.2 cohousing_set-up Cohousing set up "E1" animal_number 3 host_genotype Outbred mouse from pet store A host_tissue_sampled Small intestine collection_date 2019-01-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746030 SAMN22605223 1441287 mouse metagenome ['Small intestine content sample of "B1" cohousing set-up, animal 2 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.2.8 cohousing_set-up Cohousing set-up "B1" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine content collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746031 SAMN22605330 1441287 mouse metagenome ['Small intestine sample of "E1" cohousing set-up, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK03.5.2 cohousing_set-up Cohousing set up "E1" animal_number 4 host_genotype Outbred mouse from pet store B host_tissue_sampled Small intestine collection_date 2019-01-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746032 SAMN22605332 1441287 mouse metagenome ['Small intestine sample of "E2" cohousing set-up, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK03.13.2 cohousing_set-up Cohousing set up "E2" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2019-01-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746033 SAMN22605331 1441287 mouse metagenome ['Small intestine sample of "E2" cohousing set-up, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK03.11.2 cohousing_set-up Cohousing set up "E2" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2019-01-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746034 SAMN22605333 1441287 mouse metagenome ['Small intestine sample of "E2" cohousing set-up, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK03.14.2 cohousing_set-up Cohousing set up "E2" animal_number 3 host_genotype Outbred mouse from pet store A host_tissue_sampled Small intestine collection_date 2019-01-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746035 SAMN22605334 1441287 mouse metagenome ['Small intestine sample of "E2" cohousing set-up, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK03.15.2 cohousing_set-up Cohousing set up "E2" animal_number 4 host_genotype Outbred mouse from pet store B host_tissue_sampled Small intestine collection_date 2019-01-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746036 SAMN22605335 1441287 mouse metagenome ['Small intestine sample of "F1" cohousing set-up, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK03.6.2 cohousing_set-up Cohousing set up "F1" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2019-01-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746037 SAMN22605337 1441287 mouse metagenome ['Small intestine sample of "F1" cohousing set-up, animal 3 of 4 (ABX-treated pet store mouse)', ''] bioproject 775628 PRJNA775628 Sample_ID AK03.9.2 cohousing_set-up Cohousing set up "F1" animal_number 3 host_genotype Outbred mouse from pet store A + ABX host_tissue_sampled Small intestine collection_date 2019-01-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746038 SAMN22605336 1441287 mouse metagenome ['Small intestine sample of "F1" cohousing set-up, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK03.8.2 cohousing_set-up Cohousing set up "F1" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2019-01-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746039 SAMN22605339 1441287 mouse metagenome ['Small intestine sample of "F2" cohousing set-up, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK03.16.2 cohousing_set-up Cohousing set up "F2" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine collection_date 2019-01-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746040 SAMN22605338 1441287 mouse metagenome ['Small intestine sample of "F1" cohousing set-up, animal 4 of 4 (ABX-treated pet store mouse)', ''] bioproject 775628 PRJNA775628 Sample_ID AK03.10.2 cohousing_set-up Cohousing set up "F1" animal_number 4 host_genotype Outbred mouse from pet store B + ABX host_tissue_sampled Small intestine collection_date 2019-01-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746041 SAMN22605227 1441287 mouse metagenome ['Small intestine content sample of "B1" cohousing set-up, animal 3 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.3.8 cohousing_set-up Cohousing set-up "B1" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine content collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746042 SAMN22605340 1441287 mouse metagenome ['Small intestine sample of "F2" cohousing set-up, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK03.18.2 cohousing_set-up Cohousing set up "F2" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine collection_date 2019-01-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746043 SAMN22605341 1441287 mouse metagenome ['Small intestine sample of "F2" cohousing set-up, animal 3 of 4 (ABX-treated pet store mouse)', ''] bioproject 775628 PRJNA775628 Sample_ID AK03.19.2 cohousing_set-up Cohousing set up "F2" animal_number 3 host_genotype Outbred mouse from pet store A + ABX host_tissue_sampled Small intestine collection_date 2019-01-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746044 SAMN22605344 1427740 rat metagenome ['Liver sample of rat fomite transmission experiment, animal 1 of 8', ''] bioproject 775628 PRJNA775628 Sample_ID AK22.1.3 cohousing_set-up Rat fomite experiment animal_number 1 host_genotype Outbred rat from pet store A host_tissue_sampled Liver collection_date 2020-01-31 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Rattus norvegicus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746045 SAMN22605342 1441287 mouse metagenome ['Small intestine sample of "F2" cohousing set-up, animal 4 of 4 (ABX-treated pet store mouse)', ''] bioproject 775628 PRJNA775628 Sample_ID AK03.20.2 cohousing_set-up Cohousing set up "F2" animal_number 4 host_genotype Outbred mouse from pet store B + ABX host_tissue_sampled Small intestine collection_date 2019-01-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746046 SAMN22605346 1427740 rat metagenome ['Liver sample of rat fomite transmission experiment, animal 2 of 8', ''] bioproject 775628 PRJNA775628 Sample_ID AK22.2.3 cohousing_set-up Rat fomite experiment animal_number 2 host_genotype Outbred rat from pet store A host_tissue_sampled Liver collection_date 2020-01-31 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Rattus norvegicus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746047 SAMN22605350 1441287 mouse metagenome ['Liver sample of rat fomite transmission experiment, animal 4 of 8', ''] bioproject 775628 PRJNA775628 Sample_ID AK22.4.3 cohousing_set-up Rat fomite experiment animal_number 4 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2020-01-31 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746048 SAMN22605348 1441287 mouse metagenome ['Liver sample of rat fomite transmission experiment, animal 3 of 8', ''] bioproject 775628 PRJNA775628 Sample_ID AK22.3.3 cohousing_set-up Rat fomite experiment animal_number 3 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2020-01-31 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746049 SAMN22605231 1441287 mouse metagenome ['Small intestine content sample of "B1" cohousing set-up, animal 4 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.4.8 cohousing_set-up Cohousing set-up "B1" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine content collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746050 SAMN22605352 1441287 mouse metagenome ['Liver sample of rat fomite transmission experiment, animal 5 of 8', ''] bioproject 775628 PRJNA775628 Sample_ID AK22.5.3 cohousing_set-up Rat fomite experiment animal_number 5 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2020-01-31 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746051 SAMN22605354 1441287 mouse metagenome ['Liver sample of rat fomite transmission experiment, animal 6 of 8', ''] bioproject 775628 PRJNA775628 Sample_ID AK22.6.3 cohousing_set-up Rat fomite experiment animal_number 6 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Liver collection_date 2020-01-31 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746052 SAMN22605353 1441287 mouse metagenome ['Small instestine sample of rat fomite transmission experiment, animal 6 of 8', ''] bioproject 775628 PRJNA775628 Sample_ID AK22.6.2 cohousing_set-up Rat fomite experiment animal_number 6 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine collection_date 2020-01-31 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746053 SAMN22605355 1441287 mouse metagenome ['Small instestine sample of rat fomite transmission experiment, animal 7 of 8', ''] bioproject 775628 PRJNA775628 Sample_ID AK22.7.2 cohousing_set-up Rat fomite experiment animal_number 7 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine collection_date 2020-01-31 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746054 SAMN22605356 1441287 mouse metagenome ['Liver sample of rat fomite transmission experiment, animal 7 of 8', ''] bioproject 775628 PRJNA775628 Sample_ID AK22.7.3 cohousing_set-up Rat fomite experiment animal_number 7 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Liver collection_date 2020-01-31 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746055 SAMN22605358 1441287 mouse metagenome ['Liver sample of rat fomite transmission experiment, animal 8 of 8', ''] bioproject 775628 PRJNA775628 Sample_ID AK22.8.3 cohousing_set-up Rat fomite experiment animal_number 8 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Liver collection_date 2020-01-31 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746056 SAMN22605235 1441287 mouse metagenome ['Small intestine content sample of "B1" cohousing set-up, animal 5 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.5.8 cohousing_set-up Cohousing set-up "B1" animal_number 5 host_genotype Outbred mouse from pet store C host_tissue_sampled Small intestine content collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746057 SAMN22605357 1441287 mouse metagenome ['Small instestine sample of rat fomite transmission experiment, animal 8 of 8', ''] bioproject 775628 PRJNA775628 Sample_ID AK22.8.2 cohousing_set-up Rat fomite experiment animal_number 8 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine collection_date 2020-01-31 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746058 SAMN22605239 1441287 mouse metagenome ['Small intestine content sample of "B1" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04c.11.8 cohousing_set-up Cohousing set-up "B1", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine content collection_date 2020-09-04 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746059 SAMN22605243 1441287 mouse metagenome ['Small intestine content sample of "B1" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04c.12.8 cohousing_set-up Cohousing set-up "B1", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine content collection_date 2020-09-04 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746060 SAMN22605247 1441287 mouse metagenome ['Small intestine content sample of "B1" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04c.13.8 cohousing_set-up Cohousing set-up "B1", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine content collection_date 2020-09-04 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746061 SAMN22605251 1441287 mouse metagenome ['Small intestine content sample of "B1" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04c.14.8 cohousing_set-up Cohousing set-up "B1", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine content collection_date 2020-09-04 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746062 SAMN22605255 1441287 mouse metagenome ['Small intestine content sample of "B2" cohousing set-up, animal 1 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.6.8 cohousing_set-up Cohousing set-up "B2" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine content collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746063 SAMN22605079 1441287 mouse metagenome ['Small intestine content sample of "A1" cohousing set-up, animal 6 of 6', ''] bioproject 775628 PRJNA775628 Sample_ID AK04.7.8 cohousing_set-up Cohousing set-up "A1" animal_number 6 host_genotype Outbred mouse from pet store B host_tissue_sampled Small intestine content collection_date 2019-02-13 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746064 SAMN22605259 1441287 mouse metagenome ['Small intestine content sample of "B2" cohousing set-up, animal 2 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.7.8 cohousing_set-up Cohousing set-up "B2" animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine content collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746065 SAMN22605263 1441287 mouse metagenome ['Small intestine content sample of "B2" cohousing set-up, animal 3 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.8.8 cohousing_set-up Cohousing set-up "B2" animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine content collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746066 SAMN22605267 1441287 mouse metagenome ['Small intestine content sample of "B2" cohousing set-up, animal 4 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.9.8 cohousing_set-up Cohousing set-up "B2" animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine content collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746067 SAMN22605271 1441287 mouse metagenome ['Small intestine content sample of "B2" cohousing set-up, animal 5 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.10.8 cohousing_set-up Cohousing set-up "B2" animal_number 5 host_genotype Outbred mouse from pet store B host_tissue_sampled Small intestine content collection_date 2020-09-01 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746068 SAMN22605083 1441287 mouse metagenome ['Small intestine content sample of "A1" cohousing set-up matched controls, animal 1 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.12.8 cohousing_set-up Cohousing set-up "A1", SPF control animal_number 1 host_genotype C57BL/6J host_tissue_sampled Small intestine content collection_date 2019-03-07 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746069 SAMN22605091 1441287 mouse metagenome ['Small intestine content sample of "A1" cohousing set-up matched controls, animal 3 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.7.8 cohousing_set-up Cohousing set-up "A1", SPF control animal_number 3 host_genotype B6.IL-28RA −/− host_tissue_sampled Small intestine content collection_date 2019-01-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746070 SAMN22605087 1441287 mouse metagenome ['Small intestine content sample of "A1" cohousing set-up matched controls, animal 2 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.2.8 cohousing_set-up Cohousing set-up "A1", SPF control animal_number 2 host_genotype B6(Cg)-Ifnar1 tm1.2Ees/J host_tissue_sampled Small intestine content collection_date 2018-12-27 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746071 SAMN22605095 1441287 mouse metagenome ['Small intestine content sample of "A1" cohousing set-up matched controls, animal 4 of 4', ''] bioproject 775628 PRJNA775628 Sample_ID AK04c.3.8 cohousing_set-up Cohousing set-up "A1", SPF control animal_number 4 host_genotype B6.IL-28RA-/- Ifnar1-/- host_tissue_sampled Small intestine content collection_date 2018-12-27 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS10746240 SAMN22605217 1441287 mouse metagenome ['Liver sample of "B1" cohousing set-up, animal 1 of 5', ''] bioproject 775628 PRJNA775628 Sample_ID AJ04.1.3 cohousing_set-up Cohousing set-up "B1" animal_number 1 host_genotype C57BL/6J host_tissue_sampled Liver collection_date 2020-08-25 env_broad_scale not applicable env_local_scale not applicable env_medium not applicable geo_loc_name USA: Minnesota host Mus musculus lat_lon not collected BioSampleModel MIMS.me BioSampleModel MIGS/MIMS/MIMARKS.host-associated