SRS10772832 SAMN22711257 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037600/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772833 SAMN22711126 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037599/2021 collected_by Fulgent Genetics collection_date 2021-06-13 isolation_source nasopharyngeal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race UNK collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772834 SAMN22711256 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037602/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772835 SAMN22711255 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037605/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.621 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772836 SAMN22711125 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037603/2021 collected_by Fulgent Genetics collection_date 2021-06-13 isolation_source nasopharyngeal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race UNK collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.621 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772837 SAMN22711254 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037606/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 7 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772838 SAMN22711252 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037609/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772839 SAMN22711251 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037610/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772840 SAMN22711253 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037607/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772841 SAMN22711250 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037611/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772842 SAMN22711249 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037612/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772843 SAMN22711248 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037613/2021 collected_by Fulgent Genetics collection_date 2021-06-11 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772844 SAMN22711247 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037614/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772845 SAMN22711246 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037615/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 4 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772846 SAMN22711245 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037616/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772847 SAMN22711244 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037618/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772848 SAMN22711124 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037620/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772849 SAMN22711243 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037619/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772850 SAMN22711242 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037621/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 6 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772851 SAMN22711241 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037622/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772852 SAMN22711163 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/GA-CDC-FG-037623/2021 collected_by Fulgent Genetics collection_date 2021-05-04 isolation_source nasopharyngeal swab geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race UNK collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC COVID-19 diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC COVID-19 diagnostic_pcr_Ct_value_2 21.4 diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC COVID-19 diagnostic_pcr_Ct_value_3 21.8 lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772853 SAMN22711240 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037624/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 11 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772854 SAMN22711239 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037625/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 1 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772855 SAMN22711237 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037627/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772856 SAMN22711238 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037626/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772857 SAMN22711236 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037628/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772858 SAMN22711235 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037630/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 4 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772859 SAMN22711234 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037631/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772860 SAMN22711232 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037633/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 59 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772861 SAMN22711233 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037632/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772862 SAMN22711231 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037635/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 39 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772863 SAMN22711123 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037634/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772864 SAMN22711230 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037636/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name A.2.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772865 SAMN22711229 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037637/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 3 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772866 SAMN22711227 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037639/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772867 SAMN22711228 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037638/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772868 SAMN22711225 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037641/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772869 SAMN22711226 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037640/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772870 SAMN22711224 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037642/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772871 SAMN22711223 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037644/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772872 SAMN22711222 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037645/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772873 SAMN22711220 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037647/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 9 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772874 SAMN22711221 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037646/2021 collected_by Fulgent Genetics collection_date 2021-06-11 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772875 SAMN22711219 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037648/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772876 SAMN22711218 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037649/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772877 SAMN22711217 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037650/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 72 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772878 SAMN22711215 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037652/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772879 SAMN22711216 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037651/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772880 SAMN22711213 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037654/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 11 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772881 SAMN22711214 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037653/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.621 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772882 SAMN22711212 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037655/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 41 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772883 SAMN22711211 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037656/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772884 SAMN22711209 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037658/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772885 SAMN22711207 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037660/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772886 SAMN22711206 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037661/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772887 SAMN22711210 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037657/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 53 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.621 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772888 SAMN22711205 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037662/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772889 SAMN22711204 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037663/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 37 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772890 SAMN22711208 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037659/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772891 SAMN22711203 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037664/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772892 SAMN22711202 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037665/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 10 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772893 SAMN22711201 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037666/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772894 SAMN22711199 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037668/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772895 SAMN22711198 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037669/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772896 SAMN22711200 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037667/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772897 SAMN22711197 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037670/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772898 SAMN22711195 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037672/2021 collected_by Fulgent Genetics collection_date 2021-06-11 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772899 SAMN22711196 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037671/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772900 SAMN22711193 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037674/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 17 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772901 SAMN22711192 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037675/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 8 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772902 SAMN22711194 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037673/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772903 SAMN22711190 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037677/2021 collected_by Fulgent Genetics collection_date 2021-06-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772904 SAMN22711189 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037678/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772905 SAMN22711191 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037676/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 2 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772906 SAMN22711186 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037682/2021 collected_by Fulgent Genetics collection_date 2021-06-07 isolation_source RNA geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 63 host_race unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 ThermoFisher TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 ThermoFisher TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 ThermoFisher TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772907 SAMN22711187 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037680/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 64 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772908 SAMN22711188 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037679/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 18 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772909 SAMN22711122 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037683/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772910 SAMN22711120 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037687/2021 collected_by Fulgent Genetics collection_date 2021-06-07 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772911 SAMN22711121 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037685/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Perkin Elmer Nucleic Acid Detection Kit diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Perkin Elmer Nucleic Acid Detection Kit diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Perkin Elmer Nucleic Acid Detection Kit diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772912 SAMN22711118 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037693/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772913 SAMN22711119 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037692/2021 collected_by Fulgent Genetics collection_date 2021-06-07 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772914 SAMN22711117 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037697/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772915 SAMN22711116 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037698/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772916 SAMN22711115 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037700/2021 collected_by Fulgent Genetics collection_date 2021-06-07 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772917 SAMN22711114 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037702/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772918 SAMN22711113 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037703/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772919 SAMN22711185 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037705/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772920 SAMN22711184 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037708/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772921 SAMN22711265 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/AL-CDC-FG-037707/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: Alabama host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772922 SAMN22711183 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037709/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772923 SAMN22711112 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037710/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772924 SAMN22711182 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037711/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772925 SAMN22711111 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037713/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772926 SAMN22711110 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037714/2021 collected_by Fulgent Genetics collection_date 2021-06-07 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 74 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772927 SAMN22711109 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037720/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772928 SAMN22711154 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037715/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.241 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772929 SAMN22711181 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037721/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 44 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772930 SAMN22711108 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037726/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name A.2.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772931 SAMN22711162 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NJ-CDC-FG-037727/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772932 SAMN22711180 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037725/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772933 SAMN22711152 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037731/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.623 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772934 SAMN22711153 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037729/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772935 SAMN22711179 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037733/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772936 SAMN22711107 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037735/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772937 SAMN22711178 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037736/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772938 SAMN22711161 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NJ-CDC-FG-037734/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772939 SAMN22711176 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037739/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772940 SAMN22711177 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037738/2021 collected_by Fulgent Genetics collection_date 2021-06-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772941 SAMN22711129 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/PA-CDC-FG-037741/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.623 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772942 SAMN22711175 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037744/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 41 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772943 SAMN22711106 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037749/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772944 SAMN22711174 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037751/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772945 SAMN22711173 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037754/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 12 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 11.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772946 SAMN22711151 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037756/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.623 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772947 SAMN22711171 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037760/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 34 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772948 SAMN22711170 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037762/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772949 SAMN22711172 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037758/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 68 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772950 SAMN22711169 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037768/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 11.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772951 SAMN22711168 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-037769/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772952 SAMN22711264 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/AL-CDC-FG-037764/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: Alabama host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772953 SAMN22711105 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037770/2021 collected_by Fulgent Genetics collection_date 2021-06-07 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772954 SAMN22711087 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/VA-CDC-FG-037776/2021 collected_by Fulgent Genetics collection_date 2021-06-10 isolation_source RNA geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772955 SAMN22711263 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/AL-CDC-FG-037774/2021 collected_by Fulgent Genetics collection_date 2021-06-11 isolation_source RNA geo_loc_name USA: Alabama host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772956 SAMN22711149 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037781/2021 collected_by Fulgent Genetics collection_date 2021-06-11 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772957 SAMN22711150 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037780/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772958 SAMN22711262 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/AL-CDC-FG-037783/2021 collected_by Fulgent Genetics collection_date 2021-06-10 isolation_source RNA geo_loc_name USA: Alabama host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_3 Unknown lineage/clade name C.37 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772959 SAMN22711148 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037784/2021 collected_by Fulgent Genetics collection_date 2021-06-11 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772960 SAMN22711103 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037787/2021 collected_by Fulgent Genetics collection_date 2021-06-07 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772961 SAMN22711104 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037785/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772962 SAMN22711147 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037791/2021 collected_by Fulgent Genetics collection_date 2021-06-11 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772963 SAMN22711128 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/PA-CDC-FG-037790/2021 collected_by Fulgent Genetics collection_date 2021-06-10 isolation_source RNA geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772964 SAMN22711261 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/AL-CDC-FG-037794/2021 collected_by Fulgent Genetics collection_date 2021-06-07 isolation_source RNA geo_loc_name USA: Alabama host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772965 SAMN22711260 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/AL-CDC-FG-037797/2021 collected_by Fulgent Genetics collection_date 2021-06-07 isolation_source RNA geo_loc_name USA: Alabama host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772966 SAMN22711146 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037802/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772967 SAMN22711102 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037798/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 75 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772968 SAMN22711145 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037806/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772969 SAMN22711101 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037805/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772970 SAMN22711144 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037810/2021 collected_by Fulgent Genetics collection_date 2021-06-10 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772971 SAMN22711143 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037811/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772972 SAMN22711141 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037814/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772973 SAMN22711142 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037812/2021 collected_by Fulgent Genetics collection_date 2021-06-11 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772974 SAMN22711100 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037818/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name A.2.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772975 SAMN22711140 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037827/2021 collected_by Fulgent Genetics collection_date 2021-06-10 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772976 SAMN22711139 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037829/2021 collected_by Fulgent Genetics collection_date 2021-06-11 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772977 SAMN22711099 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037834/2021 collected_by Fulgent Genetics collection_date 2021-06-07 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772978 SAMN22711138 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037836/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772979 SAMN22711098 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037846/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772980 SAMN22711160 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NJ-CDC-FG-037840/2021 collected_by Fulgent Genetics collection_date 2021-06-10 isolation_source RNA geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772981 SAMN22711259 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/AL-CDC-FG-037851/2021 collected_by Fulgent Genetics collection_date 2021-06-13 isolation_source RNA geo_loc_name USA: Alabama host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772982 SAMN22711159 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NJ-CDC-FG-037855/2021 collected_by Fulgent Genetics collection_date 2021-06-11 isolation_source RNA geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.621 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772983 SAMN22711158 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NJ-CDC-FG-037862/2021 collected_by Fulgent Genetics collection_date 2021-06-07 isolation_source RNA geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772984 SAMN22711137 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037870/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772985 SAMN22711097 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037863/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772986 SAMN22711157 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NJ-CDC-FG-037871/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772987 SAMN22711156 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NJ-CDC-FG-037875/2021 collected_by Fulgent Genetics collection_date 2021-06-11 isolation_source RNA geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772988 SAMN22711136 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037876/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772989 SAMN22711096 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037878/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772990 SAMN22711135 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037880/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772991 SAMN22711095 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037879/2021 collected_by Fulgent Genetics collection_date 2021-06-13 isolation_source nasopharyngeal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race UNK collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 11.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772992 SAMN22711134 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037881/2021 collected_by Fulgent Genetics collection_date 2021-06-11 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772993 SAMN22711127 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/PA-CDC-FG-037884/2021 collected_by Fulgent Genetics collection_date 2021-06-10 isolation_source RNA geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772994 SAMN22711094 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037883/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772995 SAMN22711258 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/AL-CDC-FG-037888/2021 collected_by Fulgent Genetics collection_date 2021-06-10 isolation_source RNA geo_loc_name USA: Alabama host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 nCoV_N1 (CT Value) diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772996 SAMN22711167 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-037893/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 68 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772997 SAMN22711133 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037889/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.621 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772998 SAMN22711166 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-037894/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10772999 SAMN22711093 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037895/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TAQMAN diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TAQMAN diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TAQMAN diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10773000 SAMN22711164 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-037898/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10773001 SAMN22711092 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037900/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10773002 SAMN22711155 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NJ-CDC-FG-037903/2021 collected_by Fulgent Genetics collection_date 2021-06-09 isolation_source RNA geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10773003 SAMN22711131 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-037904/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10773004 SAMN22711091 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037905/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10773005 SAMN22711130 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-037911/2021 collected_by Fulgent Genetics collection_date 2021-06-14 isolation_source nasal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10773006 SAMN22711132 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NY-CDC-FG-037910/2021 collected_by Fulgent Genetics collection_date 2021-06-08 isolation_source RNA geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age Unknown host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 Covid-19-CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 Covid-19-CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 Covid-19-CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.318 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10773007 SAMN22711090 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037912/2021 collected_by Fulgent Genetics collection_date 2021-06-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 70 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10773008 SAMN22711088 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037914/2021 collected_by Fulgent Genetics collection_date 2021-06-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10773009 SAMN22711089 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-037913/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10773010 SAMN22711165 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-037915/2021 collected_by Fulgent Genetics collection_date 2021-06-15 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated