SRS10781626 SAMN22711603 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087817/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781627 SAMN22711896 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087816/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781628 SAMN22711895 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087820/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781629 SAMN22711894 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087824/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 2 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781630 SAMN22712095 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087825/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 28 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781631 SAMN22711602 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087826/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781632 SAMN22712094 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087828/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 20 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781633 SAMN22711893 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087831/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781634 SAMN22712093 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087834/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 2 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781635 SAMN22711892 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087833/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781636 SAMN22711891 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087836/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781637 SAMN22711601 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087837/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 11.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781638 SAMN22711890 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087838/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781639 SAMN22711889 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087842/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 30.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781640 SAMN22711887 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087848/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781641 SAMN22711888 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087844/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 30.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781642 SAMN22711886 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087849/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781643 SAMN22711885 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087850/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781644 SAMN22712092 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087851/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 22 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781645 SAMN22711884 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087852/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781646 SAMN22711897 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087806/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781647 SAMN22711604 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087809/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781648 SAMN22711880 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087860/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781649 SAMN22711879 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087861/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 58 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781650 SAMN22711878 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087862/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 6 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781651 SAMN22711877 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087865/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781652 SAMN22711876 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087866/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781653 SAMN22711875 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087867/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781654 SAMN22711874 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087869/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781655 SAMN22711873 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087870/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781656 SAMN22712091 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087871/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 2 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781657 SAMN22712069 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088220/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 10 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781658 SAMN22711872 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087872/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781659 SAMN22711662 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088221/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 72 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781660 SAMN22711661 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088222/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781661 SAMN22712068 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088223/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 31 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781662 SAMN22712067 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088227/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 51 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781663 SAMN22711660 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088230/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781664 SAMN22711659 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088231/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 62 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781665 SAMN22711658 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088232/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781666 SAMN22711657 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088235/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781667 SAMN22711670 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088208/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 30.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781668 SAMN22712071 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088209/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 31 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 11.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781669 SAMN22711669 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088210/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781670 SAMN22712011 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088241/2021 collected_by Fulgent Genetics collection_date 2021-08-10 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781671 SAMN22712065 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088244/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 56 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781672 SAMN22712064 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088246/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 52 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781673 SAMN22712003 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-088248/2021 collected_by Fulgent Genetics collection_date 2021-08-12 isolation_source nasopharyngeal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race UNK collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781674 SAMN22712010 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088252/2021 collected_by Fulgent Genetics collection_date 2021-08-10 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781675 SAMN22711655 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088253/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781676 SAMN22711588 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-088257/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781677 SAMN22711997 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/RI-CDC-FG-088259/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Rhode Island host Homo sapiens host_disease COVID-19 host_sex male host_age 58 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781678 SAMN22711654 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088260/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781679 SAMN22711653 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088268/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.628 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781680 SAMN22711652 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088270/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781681 SAMN22711651 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088273/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781682 SAMN22711650 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088274/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781683 SAMN22711649 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088275/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781684 SAMN22712063 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088276/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 61 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781685 SAMN22711587 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-088280/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781686 SAMN22711996 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/SC-CDC-FG-088282/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasopharyngeal swab geo_loc_name USA: South Carolina host Homo sapiens host_disease COVID-19 host_sex male host_age 64 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781687 SAMN22712062 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088286/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 27 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781688 SAMN22711648 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088287/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781689 SAMN22712012 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088237/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 68 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 10.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781690 SAMN22711616 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/VA-CDC-FG-088288/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 87 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781691 SAMN22712066 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088239/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 35 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781692 SAMN22711656 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088240/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781693 SAMN22712061 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088296/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 90+ host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781694 SAMN22711645 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088297/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 76 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781695 SAMN22712117 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-088299/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 90+ host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781696 SAMN22712060 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088300/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 38 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781697 SAMN22711586 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-088305/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 11.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781698 SAMN22712059 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088307/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 7 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781699 SAMN22711644 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088309/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781700 SAMN22711643 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088311/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781701 SAMN22711642 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088317/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781702 SAMN22711641 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088320/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 70 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781703 SAMN22712009 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088322/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781704 SAMN22712058 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088327/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 60 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781705 SAMN22711640 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088336/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781706 SAMN22712002 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-088337/2021 collected_by Fulgent Genetics collection_date 2021-08-12 isolation_source nasal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 11.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781707 SAMN22712057 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088340/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 57 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781708 SAMN22711639 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088342/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781709 SAMN22711585 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-088344/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781710 SAMN22711638 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088349/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781711 SAMN22711647 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088293/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781712 SAMN22711646 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088294/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781713 SAMN22711634 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088380/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781714 SAMN22711633 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088385/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781715 SAMN22711631 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088388/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781716 SAMN22711632 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088387/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.628 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781717 SAMN22711630 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088389/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 81 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781718 SAMN22711629 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088394/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781719 SAMN22711628 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088398/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781720 SAMN22711627 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088407/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781721 SAMN22712001 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-088411/2021 collected_by Fulgent Genetics collection_date 2021-08-12 isolation_source nasal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 79 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 10.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781722 SAMN22712008 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088417/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781724 SAMN22711625 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088421/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781725 SAMN22711584 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-088427/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781726 SAMN22711623 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088453/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781723 SAMN22711626 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088420/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781727 SAMN22711624 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088432/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 10.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781728 SAMN22712007 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088456/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 54 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781729 SAMN22711622 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088460/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781730 SAMN22711637 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088351/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781731 SAMN22711636 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088362/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781732 SAMN22711635 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088365/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781733 SAMN22712056 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088376/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 27 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781734 SAMN22712055 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088379/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 56 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781735 SAMN22711582 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-088480/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781736 SAMN22712053 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088504/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 17 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781737 SAMN22712052 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088519/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 22 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781738 SAMN22711620 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088488/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781739 SAMN22711619 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088532/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781740 SAMN22711618 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088603/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781741 SAMN22711617 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088662/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781742 SAMN22711621 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088471/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781743 SAMN22711583 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-088474/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781744 SAMN22712054 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088475/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 27 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781745 SAMN22711871 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087874/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781746 SAMN22711870 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087875/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781747 SAMN22711869 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087876/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 37 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781748 SAMN22711868 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087877/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781749 SAMN22711867 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087878/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781750 SAMN22711866 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087880/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 9 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781751 SAMN22711865 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087881/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781752 SAMN22711883 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087856/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 72 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781753 SAMN22711881 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087859/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 64 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781754 SAMN22711882 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087857/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781755 SAMN22711860 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087888/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781756 SAMN22711859 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087889/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781757 SAMN22711858 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087890/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781758 SAMN22711857 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087892/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 7 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781759 SAMN22711856 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087894/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781760 SAMN22711855 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087895/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781761 SAMN22711854 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087897/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 13 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781762 SAMN22711853 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087898/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781763 SAMN22712051 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-087899/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781764 SAMN22711852 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087900/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781765 SAMN22711851 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087901/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781766 SAMN22711850 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087903/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781767 SAMN22711849 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087905/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781768 SAMN22711848 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087907/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781769 SAMN22711847 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087908/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781770 SAMN22711846 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087909/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781771 SAMN22711845 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087910/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781772 SAMN22711864 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087883/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781773 SAMN22711863 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087884/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781774 SAMN22711862 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087885/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 66 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781775 SAMN22711844 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087911/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781776 SAMN22711861 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087886/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781777 SAMN22712090 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087887/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 58 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781778 SAMN22711600 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087915/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781779 SAMN22711841 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087916/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781780 SAMN22711840 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087918/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781781 SAMN22711839 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087919/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781782 SAMN22711838 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087920/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781783 SAMN22711837 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087921/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781784 SAMN22712005 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-087922/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781785 SAMN22711599 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087924/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781786 SAMN22712050 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-087925/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781787 SAMN22711598 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087928/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 10.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781788 SAMN22711836 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087929/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 30.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781789 SAMN22711835 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087931/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781790 SAMN22711834 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087934/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 29.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781791 SAMN22711833 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087935/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781792 SAMN22711832 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087936/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781793 SAMN22711831 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087938/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781794 SAMN22711830 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087939/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781795 SAMN22711829 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087940/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781796 SAMN22711828 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087941/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781797 SAMN22711827 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087942/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781798 SAMN22711843 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087912/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781799 SAMN22711824 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087947/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781800 SAMN22711823 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087948/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781801 SAMN22711842 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087913/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781802 SAMN22711822 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087949/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781803 SAMN22711821 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087950/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781804 SAMN22711820 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087951/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781805 SAMN22711819 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087952/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781806 SAMN22711818 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087954/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781807 SAMN22711817 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087955/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781808 SAMN22711816 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087957/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781809 SAMN22711815 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087958/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781810 SAMN22711814 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087960/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781811 SAMN22712049 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-087961/2021 collected_by Fulgent Genetics collection_date 2021-08-11 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781812 SAMN22711813 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087962/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781813 SAMN22711812 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087963/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781814 SAMN22711597 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087964/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781815 SAMN22711811 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087965/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781816 SAMN22711810 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087966/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781817 SAMN22712048 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-087968/2021 collected_by Fulgent Genetics collection_date 2021-08-12 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781818 SAMN22711809 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087967/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781819 SAMN22711826 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087943/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781820 SAMN22711808 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087969/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 70 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781821 SAMN22712089 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087944/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 12 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781822 SAMN22711806 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087972/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781823 SAMN22711825 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087946/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 29.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781824 SAMN22711805 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087975/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 29.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name C.37 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781825 SAMN22712087 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087973/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 20 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781826 SAMN22711804 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087976/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781827 SAMN22712047 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-087978/2021 collected_by Fulgent Genetics collection_date 2021-08-12 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781828 SAMN22711803 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087979/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781829 SAMN22711802 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087980/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 59 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781830 SAMN22711801 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087981/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781831 SAMN22711800 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087982/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781832 SAMN22711799 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087983/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 11.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781833 SAMN22711798 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087985/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781834 SAMN22711797 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087986/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781835 SAMN22712046 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-087987/2021 collected_by Fulgent Genetics collection_date 2021-08-10 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781836 SAMN22711796 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087988/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 63 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781837 SAMN22711795 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087991/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781838 SAMN22712044 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-087993/2021 collected_by Fulgent Genetics collection_date 2021-08-11 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781839 SAMN22712045 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-087992/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781840 SAMN22711794 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087994/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 30.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781841 SAMN22712043 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-087995/2021 collected_by Fulgent Genetics collection_date 2021-08-10 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781842 SAMN22711793 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087996/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781843 SAMN22711807 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087970/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781844 SAMN22711790 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088002/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781845 SAMN22712088 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087971/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 49 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781846 SAMN22711789 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088003/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781847 SAMN22711788 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088004/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781848 SAMN22711787 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088005/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781849 SAMN22711786 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088007/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781850 SAMN22712041 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088008/2021 collected_by Fulgent Genetics collection_date 2021-08-10 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 54 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781851 SAMN22711785 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088009/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 61 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781852 SAMN22711784 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088010/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781853 SAMN22711782 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088012/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781854 SAMN22711783 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088011/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781855 SAMN22711781 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088013/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race WHI collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781856 SAMN22711780 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088015/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781857 SAMN22711778 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088017/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 9 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781858 SAMN22711779 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088016/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 64 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781859 SAMN22711777 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088018/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 84 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781860 SAMN22711596 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-088020/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781861 SAMN22711595 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-088021/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781862 SAMN22711775 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088023/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781863 SAMN22711776 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088022/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 74 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781864 SAMN22711774 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088024/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781865 SAMN22711792 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087998/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781866 SAMN22711791 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087999/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 77 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781867 SAMN22712042 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088000/2021 collected_by Fulgent Genetics collection_date 2021-08-10 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781868 SAMN22711772 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088029/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781869 SAMN22711771 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088032/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781870 SAMN22711770 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088033/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781871 SAMN22711769 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088035/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781872 SAMN22711768 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088036/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 10 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781873 SAMN22711767 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088037/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781874 SAMN22712086 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088038/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 28 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781875 SAMN22711766 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088039/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781876 SAMN22711765 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088040/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781877 SAMN22711764 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088042/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781878 SAMN22712085 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088044/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 34 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781879 SAMN22711763 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088045/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781880 SAMN22711762 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088046/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781881 SAMN22711761 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088047/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781882 SAMN22711594 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-088049/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 6 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781883 SAMN22711760 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088050/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781884 SAMN22711759 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088051/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 11.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781885 SAMN22711758 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088053/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781886 SAMN22711757 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088055/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781887 SAMN22712084 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088057/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 45 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781888 SAMN22711773 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088025/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 64 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781889 SAMN22712040 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088027/2021 collected_by Fulgent Genetics collection_date 2021-08-12 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781890 SAMN22711754 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088061/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781891 SAMN22711752 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088063/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781892 SAMN22711753 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088062/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781893 SAMN22712038 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088064/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781894 SAMN22712000 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/PR-CDC-FG-088065/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Puerto Rico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 27 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781895 SAMN22711750 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088067/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781896 SAMN22711751 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088066/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781897 SAMN22712037 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088068/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781898 SAMN22711749 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088069/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781899 SAMN22712036 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088072/2021 collected_by Fulgent Genetics collection_date 2021-08-12 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781900 SAMN22712035 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088074/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781901 SAMN22712120 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/AZ-CDC-FG-088073/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 54 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781902 SAMN22711748 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088076/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781903 SAMN22712034 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088077/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 59 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781904 SAMN22711593 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-088079/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 2 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781905 SAMN22712033 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088078/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781906 SAMN22711747 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088080/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasopharyngeal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781907 SAMN22712032 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088081/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781908 SAMN22711746 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088082/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781909 SAMN22711745 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088083/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781910 SAMN22711756 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088058/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781911 SAMN22712039 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088059/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781912 SAMN22711755 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088060/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781913 SAMN22712030 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088086/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781914 SAMN22712029 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088087/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781915 SAMN22712028 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088089/2021 collected_by Fulgent Genetics collection_date 2021-08-12 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781916 SAMN22712083 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088090/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 66 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781917 SAMN22712027 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088091/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781918 SAMN22711744 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088093/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781919 SAMN22711743 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088094/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781920 SAMN22711742 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088095/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781921 SAMN22712026 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088096/2021 collected_by Fulgent Genetics collection_date 2021-08-10 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781922 SAMN22711741 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088097/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781923 SAMN22711740 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088099/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781924 SAMN22711739 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088100/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 2 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781925 SAMN22711737 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088103/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 68 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781926 SAMN22711738 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088101/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781927 SAMN22711736 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088104/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 71 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781928 SAMN22712025 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088105/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781929 SAMN22711591 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-088106/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781930 SAMN22712082 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088107/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 21 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781931 SAMN22711735 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088108/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781932 SAMN22712081 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088109/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 11 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781933 SAMN22712031 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088084/2021 collected_by Fulgent Genetics collection_date 2021-08-10 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781934 SAMN22711592 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-088085/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781935 SAMN22712080 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088113/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 37 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781936 SAMN22711731 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088115/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781937 SAMN22712024 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088117/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781938 SAMN22711998 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/RI-CDC-FG-088114/2021 collected_by Fulgent Genetics collection_date 2021-08-12 isolation_source nasal swab geo_loc_name USA: Rhode Island host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781939 SAMN22711730 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088119/2021 collected_by Fulgent Genetics collection_date 2021-08-12 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race WHI collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781940 SAMN22712079 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088118/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 11 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781941 SAMN22711729 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088120/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781942 SAMN22712078 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088121/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 37 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781943 SAMN22712023 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088122/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781944 SAMN22711728 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088123/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781945 SAMN22711726 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088125/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781946 SAMN22711727 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088124/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781947 SAMN22712022 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088126/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781948 SAMN22711725 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088127/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781949 SAMN22711724 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088128/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781950 SAMN22711590 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-088129/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781951 SAMN22711723 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088130/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781952 SAMN22711722 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088131/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 11.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781953 SAMN22712077 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088132/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 22 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781954 SAMN22711721 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088133/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781955 SAMN22711734 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088110/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781956 SAMN22711733 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088111/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781957 SAMN22711732 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088112/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781958 SAMN22711717 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088138/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781959 SAMN22711718 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088136/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781960 SAMN22711716 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088139/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781961 SAMN22711715 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088140/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781962 SAMN22712021 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088143/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781963 SAMN22711714 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088142/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781964 SAMN22711713 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088144/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 29.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781965 SAMN22711712 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088145/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781966 SAMN22712076 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088147/2021 collected_by Fulgent Genetics collection_date 2021-08-12 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 19 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781967 SAMN22711589 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-088146/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781968 SAMN22711711 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088148/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781969 SAMN22711995 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087634/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781970 SAMN22711994 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087635/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781971 SAMN22711992 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087638/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781972 SAMN22711993 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087637/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781973 SAMN22711991 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087641/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781974 SAMN22711990 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087642/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781975 SAMN22711988 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087644/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781976 SAMN22711989 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087643/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781977 SAMN22711986 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087646/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781978 SAMN22711987 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087645/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781979 SAMN22711985 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087647/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781980 SAMN22711984 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087648/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781981 SAMN22711982 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087651/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781982 SAMN22711983 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087650/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781983 SAMN22711977 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087656/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781984 SAMN22711978 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087655/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781985 SAMN22711979 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087654/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 29.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781986 SAMN22711980 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087653/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781987 SAMN22711981 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087652/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781988 SAMN22711960 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087678/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781989 SAMN22711961 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087677/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781990 SAMN22711962 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087675/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781991 SAMN22711614 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087673/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781992 SAMN22711963 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087674/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781993 SAMN22711964 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087672/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781994 SAMN22711965 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087671/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 69 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781995 SAMN22712116 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087670/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 29 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781996 SAMN22711615 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087668/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781997 SAMN22711966 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087669/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781998 SAMN22711967 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087666/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 13 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10781999 SAMN22711968 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087665/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782000 SAMN22711969 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087664/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 63 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782001 SAMN22711971 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087662/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782002 SAMN22711970 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087663/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 29.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782003 SAMN22711972 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087661/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782004 SAMN22711973 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087660/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782005 SAMN22711975 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087658/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782006 SAMN22711976 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087657/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782007 SAMN22711974 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087659/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782008 SAMN22711959 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087679/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782009 SAMN22711958 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087680/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782010 SAMN22711957 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087682/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782011 SAMN22712119 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-087686/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782012 SAMN22712115 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087685/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 6 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782013 SAMN22711954 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087687/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782014 SAMN22711953 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087688/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782015 SAMN22711952 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087689/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782016 SAMN22711951 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087690/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782017 SAMN22711949 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087692/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782018 SAMN22711947 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087694/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782019 SAMN22711948 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087693/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782020 SAMN22711950 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087691/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782021 SAMN22711944 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087697/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782022 SAMN22711943 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087698/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782023 SAMN22711946 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087695/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782024 SAMN22711945 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087696/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782025 SAMN22711942 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087699/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782026 SAMN22711613 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087700/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782027 SAMN22711941 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087701/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782028 SAMN22712114 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087703/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 29 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782029 SAMN22711612 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087704/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 15 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782030 SAMN22711955 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087684/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782031 SAMN22711956 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087683/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782032 SAMN22712113 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087705/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 28 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782033 SAMN22711937 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087709/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 54 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782034 SAMN22711936 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087711/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782035 SAMN22711611 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087712/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 67 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782036 SAMN22712112 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087710/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 28 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782037 SAMN22712075 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088149/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 67 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782038 SAMN22711710 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088150/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782039 SAMN22712020 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088152/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782040 SAMN22712004 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-088151/2021 collected_by Fulgent Genetics collection_date 2021-08-12 isolation_source nasopharyngeal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race UNK collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782041 SAMN22711709 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088153/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782042 SAMN22712019 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088154/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782043 SAMN22711708 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088155/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782044 SAMN22711706 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088157/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782045 SAMN22711720 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088134/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782046 SAMN22711707 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088156/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782047 SAMN22711719 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088135/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 54 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782048 SAMN22711702 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088161/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 30.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782049 SAMN22711701 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088163/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782050 SAMN22711700 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088164/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782051 SAMN22711699 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088166/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782052 SAMN22712074 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088165/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 27 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782053 SAMN22711697 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088168/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782054 SAMN22711698 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088167/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782055 SAMN22712018 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088169/2021 collected_by Fulgent Genetics collection_date 2021-08-10 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782056 SAMN22712006 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NM-CDC-FG-088170/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 18 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782057 SAMN22711695 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088172/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782058 SAMN22711696 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088171/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782059 SAMN22711694 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088173/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782060 SAMN22712017 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088174/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782061 SAMN22711693 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088175/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782062 SAMN22711692 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088176/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 68 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 29.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782063 SAMN22712073 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088177/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 24 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782064 SAMN22711691 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088178/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 31.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782065 SAMN22711690 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088180/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782066 SAMN22711689 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088181/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782067 SAMN22711688 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088182/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 1 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782068 SAMN22711705 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088158/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782069 SAMN22712111 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087714/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 10 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782070 SAMN22711935 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087713/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 23 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 30.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782071 SAMN22711933 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087716/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782072 SAMN22711934 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087715/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782073 SAMN22711932 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087717/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782074 SAMN22711931 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087718/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 68 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782075 SAMN22711930 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087719/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 58 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782076 SAMN22712110 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087721/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 49 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782077 SAMN22711929 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087722/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782078 SAMN22711610 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087720/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782079 SAMN22711928 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087723/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782080 SAMN22711927 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087724/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782081 SAMN22711926 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087725/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782082 SAMN22712109 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087726/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 79 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782083 SAMN22712108 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087727/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 37 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782084 SAMN22711925 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087728/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782085 SAMN22711940 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087706/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782086 SAMN22711939 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087707/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782087 SAMN22711938 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087708/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782088 SAMN22711922 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087731/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782089 SAMN22712107 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087732/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 62 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782090 SAMN22711999 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/RI-CDC-FG-087733/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Rhode Island host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 64 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782091 SAMN22711609 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087734/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782092 SAMN22711608 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087735/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782093 SAMN22711921 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087736/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782094 SAMN22711920 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087737/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782095 SAMN22711919 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087738/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782096 SAMN22711918 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087739/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 12 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782097 SAMN22711917 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087740/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782098 SAMN22712106 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087741/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 34 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782099 SAMN22711916 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087743/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782100 SAMN22712105 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087744/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782101 SAMN22711607 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087746/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782102 SAMN22712104 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087747/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 34 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782103 SAMN22711915 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087748/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782104 SAMN22711914 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087749/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782105 SAMN22711913 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087752/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 66 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782106 SAMN22711912 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087754/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782107 SAMN22712103 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087755/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782108 SAMN22711924 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087729/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 61 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782109 SAMN22711923 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087730/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782110 SAMN22711909 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087761/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782111 SAMN22711908 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087762/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782112 SAMN22711907 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087767/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782113 SAMN22711906 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087769/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782114 SAMN22712101 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087771/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 21 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782115 SAMN22711905 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087778/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 6 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782116 SAMN22711606 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087775/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782117 SAMN22712100 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087779/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 48 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782118 SAMN22711904 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087781/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782119 SAMN22712099 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087783/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 13 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782120 SAMN22712098 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087784/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 33 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782121 SAMN22711903 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087788/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782122 SAMN22711902 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087789/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 13 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782123 SAMN22711901 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087792/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782124 SAMN22712097 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087793/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 63 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782125 SAMN22711605 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-087797/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782126 SAMN22712096 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087802/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 56 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782127 SAMN22711900 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087801/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 11 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782128 SAMN22711899 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087803/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782129 SAMN22711898 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087805/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782130 SAMN22711911 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087757/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 4 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782131 SAMN22711910 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-087759/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782132 SAMN22712102 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-087760/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 33 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782133 SAMN22711704 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088159/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 67 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782134 SAMN22711703 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088160/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782135 SAMN22712015 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088185/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782136 SAMN22712014 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088192/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782137 SAMN22711686 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088187/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782138 SAMN22712072 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088186/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 8 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782139 SAMN22711684 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088191/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 29.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782140 SAMN22711683 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088193/2021 collected_by Fulgent Genetics collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782141 SAMN22711681 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088195/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782142 SAMN22711682 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088194/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782143 SAMN22711680 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088197/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782144 SAMN22711679 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088198/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 31.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782145 SAMN22711678 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088199/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782146 SAMN22711677 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088200/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 58 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782147 SAMN22711676 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088202/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782148 SAMN22711675 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088203/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782149 SAMN22711672 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088206/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782150 SAMN22711674 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088204/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782151 SAMN22711673 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088205/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782152 SAMN22711671 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088207/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782153 SAMN22711687 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088183/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782154 SAMN22712016 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088184/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782155 SAMN22711668 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088211/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782156 SAMN22711666 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088214/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782157 SAMN22711667 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088212/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782158 SAMN22712118 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-088188/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 55 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782159 SAMN22711685 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088190/2021 collected_by Fulgent Genetics collection_date 2021-08-17 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782160 SAMN22712070 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-088215/2021 collected_by Fulgent Genetics collection_date 2021-08-16 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 9 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782161 SAMN22712013 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-088216/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782162 SAMN22711665 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088217/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782163 SAMN22711663 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088219/2021 collected_by Fulgent Genetics collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10782164 SAMN22711664 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-088218/2021 collected_by Fulgent Genetics collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated