SRS10855551 SAMN22708655 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034299/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855552 SAMN22708654 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034300/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 6 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.429 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855553 SAMN22708656 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034298/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 58 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.519 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855554 SAMN22708658 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034296/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855555 SAMN22708659 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034295/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855556 SAMN22708657 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034297/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855557 SAMN22708660 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034294/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855558 SAMN22708661 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034293/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 74 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855559 SAMN22708662 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034292/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 64 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855560 SAMN22708663 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034291/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 69 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855561 SAMN22708664 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034290/2021 collected_by Fulgent Genetics collection_date 2021-05-06 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855562 SAMN22708666 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034288/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855563 SAMN22708665 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034289/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.429 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855564 SAMN22708667 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034287/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855565 SAMN22708668 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034286/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855566 SAMN22708669 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034285/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 59 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.429 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855567 SAMN22708670 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034284/2021 collected_by Fulgent Genetics collection_date 2021-05-06 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855568 SAMN22708671 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034283/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.621 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855569 SAMN22708672 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034282/2021 collected_by Fulgent Genetics collection_date 2021-05-06 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855570 SAMN22708673 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034281/2021 collected_by Fulgent Genetics collection_date 2021-05-06 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855571 SAMN22708674 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034280/2021 collected_by Fulgent Genetics collection_date 2021-05-06 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855572 SAMN22708675 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034279/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855573 SAMN22708676 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034278/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855574 SAMN22708677 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034277/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855575 SAMN22708678 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034276/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855576 SAMN22708679 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034275/2021 collected_by Fulgent Genetics collection_date 2021-05-06 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 61 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855577 SAMN22708653 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034301/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855578 SAMN22708652 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034302/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855579 SAMN22708650 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034305/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 2 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855580 SAMN22708651 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034303/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855581 SAMN22708649 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034306/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.519 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855582 SAMN22708648 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034307/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855583 SAMN22709011 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034638/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855584 SAMN22708693 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034639/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855585 SAMN22709010 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034640/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855586 SAMN22708800 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034641/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 3 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855587 SAMN22708740 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-034642/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855588 SAMN22709021 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034621/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855589 SAMN22709020 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034622/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855590 SAMN22708692 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034646/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855591 SAMN22708691 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034647/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 27 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855592 SAMN22708690 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034648/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855593 SAMN22709007 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034650/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855594 SAMN22709008 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034649/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.318 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855595 SAMN22709006 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034651/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.429 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855596 SAMN22708689 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034662/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855597 SAMN22708798 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034663/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 68 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855598 SAMN22708797 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034666/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855599 SAMN22708795 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034669/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855600 SAMN22708688 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034670/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855601 SAMN22708796 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034667/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855602 SAMN22708794 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034672/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855603 SAMN22708687 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034675/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 65 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855604 SAMN22708686 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034679/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855605 SAMN22708793 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034683/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855606 SAMN22708792 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034684/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 86 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855607 SAMN22708791 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034691/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855608 SAMN22708790 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034692/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855609 SAMN22708789 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034693/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855610 SAMN22708799 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034644/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 63 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855611 SAMN22708725 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-034643/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855612 SAMN22709009 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034645/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855613 SAMN22708685 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034696/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 5 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855614 SAMN22708739 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-034697/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855615 SAMN22708786 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034698/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 6 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855616 SAMN22708785 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034700/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855617 SAMN22708724 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-034703/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855618 SAMN22708588 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-034706/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855619 SAMN22708587 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-034708/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855621 SAMN22708591 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034711/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC COVID-19 diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC COVID-19 diagnostic_pcr_Ct_value_2 26.7 diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC COVID-19 diagnostic_pcr_Ct_value_3 27.7 lineage/clade name B.1.429 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855622 SAMN22709005 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034713/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasopharyngeal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race OTH collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855620 SAMN22708784 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034709/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855623 SAMN22708723 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-034715/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasopharyngeal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race UNK collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855624 SAMN22709004 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034717/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855625 SAMN22708783 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034719/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855626 SAMN22709003 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034721/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasopharyngeal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855627 SAMN22708782 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034722/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855628 SAMN22708590 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034725/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC COVID-19 diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC COVID-19 diagnostic_pcr_Ct_value_2 17.1 diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC COVID-19 diagnostic_pcr_Ct_value_3 17.4 lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855629 SAMN22709002 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034726/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.318 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855630 SAMN22709001 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034729/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855631 SAMN22709000 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034730/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 10 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855632 SAMN22708999 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034731/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855633 SAMN22708788 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034694/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855634 SAMN22708787 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034695/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 80 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855635 SAMN22708996 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034737/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855636 SAMN22708995 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034738/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855637 SAMN22708994 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034739/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.427 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855638 SAMN22708780 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034740/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855639 SAMN22708992 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034742/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.427 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855640 SAMN22708993 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034741/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855641 SAMN22708991 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034744/2021 collected_by Fulgent Genetics collection_date 2021-05-16 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name A.2.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855642 SAMN22708990 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034745/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855643 SAMN22708779 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034746/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855644 SAMN22708989 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034747/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855645 SAMN22708987 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034752/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855646 SAMN22708988 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034751/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasopharyngeal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race UNK collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name C.37 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855647 SAMN22708684 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034749/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855648 SAMN22708984 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034756/2021 collected_by Fulgent Genetics collection_date 2021-05-16 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855649 SAMN22708986 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034753/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855650 SAMN22708983 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034757/2021 collected_by Fulgent Genetics collection_date 2021-05-16 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855651 SAMN22708985 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034754/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 13 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855652 SAMN22708982 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034758/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855653 SAMN22708722 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-034759/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasopharyngeal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race UNK collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855654 SAMN22708981 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034761/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855655 SAMN22708998 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034733/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855656 SAMN22708997 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034734/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 64 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 29.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855657 SAMN22708980 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034767/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 39 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855658 SAMN22708777 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034768/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855659 SAMN22708776 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034769/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855660 SAMN22708781 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034736/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855661 SAMN22708979 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034771/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855662 SAMN22708978 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034772/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855663 SAMN22708977 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034773/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855664 SAMN22708721 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-034774/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasopharyngeal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race UNK collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855665 SAMN22708976 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034775/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 68 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855666 SAMN22708974 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034777/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855667 SAMN22708975 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034776/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855668 SAMN22708775 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034778/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855669 SAMN22708973 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034779/2021 collected_by Fulgent Genetics collection_date 2021-05-18 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 61 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855670 SAMN22708972 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034780/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855671 SAMN22708971 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034781/2021 collected_by Fulgent Genetics collection_date 2021-05-18 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 9 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.621 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855672 SAMN22708774 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034782/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC COVID-19 diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC COVID-19 diagnostic_pcr_Ct_value_2 23.0 diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC COVID-19 diagnostic_pcr_Ct_value_3 22.1 lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855673 SAMN22708773 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034783/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855674 SAMN22708970 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034784/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855675 SAMN22708969 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034785/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855676 SAMN22708968 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034786/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855677 SAMN22708967 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034787/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855678 SAMN22708778 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034763/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 61 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855679 SAMN22708718 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/RI-CDC-FG-034764/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Rhode Island host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 50 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855680 SAMN22708963 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034791/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855681 SAMN22708772 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034792/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 6 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855682 SAMN22708961 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034796/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 27 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855683 SAMN22708962 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034793/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855684 SAMN22708960 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034797/2021 collected_by Fulgent Genetics collection_date 2021-05-16 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855685 SAMN22708959 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034798/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855686 SAMN22708958 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034799/2021 collected_by Fulgent Genetics collection_date 2021-05-16 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855687 SAMN22708957 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034800/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855688 SAMN22708683 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034802/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855689 SAMN22708956 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034803/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855690 SAMN22708955 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034804/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 60 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855691 SAMN22708771 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034805/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855692 SAMN22708954 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034806/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855693 SAMN22708953 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034808/2021 collected_by Fulgent Genetics collection_date 2021-05-18 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855694 SAMN22708770 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034809/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855695 SAMN22708952 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034810/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855696 SAMN22708951 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034811/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855697 SAMN22708966 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034788/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855698 SAMN22708965 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034789/2021 collected_by Fulgent Genetics collection_date 2021-05-16 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855699 SAMN22708964 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034790/2021 collected_by Fulgent Genetics collection_date 2021-05-16 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855700 SAMN22708945 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034817/2021 collected_by Fulgent Genetics collection_date 2021-05-16 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 15 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855701 SAMN22708944 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034818/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855702 SAMN22708769 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034819/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855703 SAMN22708943 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034820/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855704 SAMN22708942 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034821/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age <1 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855705 SAMN22708941 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034822/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855706 SAMN22708940 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034823/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855707 SAMN22708939 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034824/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855708 SAMN22708937 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034826/2021 collected_by Fulgent Genetics collection_date 2021-05-18 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.623 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855709 SAMN22708938 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034825/2021 collected_by Fulgent Genetics collection_date 2021-05-18 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 62 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855710 SAMN22708936 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034827/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855711 SAMN22708935 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034828/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 19 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855712 SAMN22708934 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034829/2021 collected_by Fulgent Genetics collection_date 2021-05-18 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855713 SAMN22708720 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-034830/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasopharyngeal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race UNK collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855714 SAMN22708933 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034831/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 42 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855715 SAMN22708768 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034832/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855716 SAMN22708932 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034833/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855717 SAMN22708950 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034812/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.429 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855718 SAMN22708949 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034813/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855719 SAMN22708948 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034814/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855720 SAMN22708931 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034834/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855721 SAMN22708947 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034815/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855722 SAMN22708946 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034816/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 13 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855723 SAMN22708928 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034837/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.318 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855724 SAMN22708927 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034838/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.318 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855725 SAMN22708926 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034839/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855726 SAMN22708925 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034840/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 11 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855727 SAMN22708924 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034841/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855728 SAMN22708767 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034842/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855729 SAMN22708923 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034843/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855730 SAMN22708922 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034844/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855731 SAMN22708921 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034845/2021 collected_by Fulgent Genetics collection_date 2021-05-16 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855732 SAMN22708920 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034846/2021 collected_by Fulgent Genetics collection_date 2021-05-18 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855733 SAMN22708766 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034847/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855734 SAMN22708918 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034849/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855735 SAMN22708917 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034850/2021 collected_by Fulgent Genetics collection_date 2021-05-18 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855736 SAMN22708919 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034848/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855737 SAMN22708916 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034851/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855738 SAMN22708915 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034852/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855739 SAMN22708914 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034853/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855740 SAMN22708765 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034854/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855741 SAMN22708929 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034836/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855742 SAMN22708909 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034860/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855743 SAMN22708930 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034835/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 3 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855744 SAMN22708908 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034861/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855745 SAMN22708907 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034862/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855746 SAMN22708906 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034863/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855747 SAMN22708764 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034864/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855748 SAMN22708905 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034865/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855749 SAMN22708904 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034866/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855750 SAMN22708903 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034867/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855751 SAMN22708902 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034868/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 9 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855752 SAMN22708900 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034870/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855753 SAMN22708901 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034869/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855754 SAMN22708899 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034871/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855755 SAMN22708898 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034872/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 62 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855756 SAMN22708763 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034873/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855757 SAMN22708897 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034874/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 68 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855758 SAMN22708896 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034875/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855759 SAMN22708682 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034876/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855760 SAMN22708913 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034855/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.318 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855761 SAMN22708912 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034856/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855762 SAMN22708911 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034857/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855763 SAMN22708737 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/MO-CDC-FG-034859/2021 collected_by Fulgent Genetics collection_date 2021-05-16 isolation_source nasal swab geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 90+ host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC COVID-19 diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC COVID-19 diagnostic_pcr_Ct_value_2 20.4 diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC COVID-19 diagnostic_pcr_Ct_value_3 20.7 lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855764 SAMN22708910 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034858/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855765 SAMN22708680 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034881/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855766 SAMN22708893 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034880/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855767 SAMN22708892 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034882/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855768 SAMN22708891 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034883/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855769 SAMN22708889 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034886/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855770 SAMN22708890 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034884/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 30 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855771 SAMN22708762 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034885/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 10 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855772 SAMN22708888 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034887/2021 collected_by Fulgent Genetics collection_date 2021-05-18 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855773 SAMN22708887 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034888/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855774 SAMN22708761 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034889/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855775 SAMN22708647 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034308/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855776 SAMN22708646 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034310/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855777 SAMN22708645 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034311/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855778 SAMN22708644 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034312/2021 collected_by Fulgent Genetics collection_date 2021-05-06 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855779 SAMN22708643 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034313/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 67 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855780 SAMN22708640 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034317/2021 collected_by Fulgent Genetics collection_date 2021-05-06 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 13 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855781 SAMN22708642 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034315/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855782 SAMN22708641 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034316/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855783 SAMN22708639 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034318/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855784 SAMN22708636 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034321/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855785 SAMN22708637 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034320/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855786 SAMN22708638 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034319/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855787 SAMN22708635 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034322/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855788 SAMN22708634 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034323/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 9 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855789 SAMN22708633 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034325/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855790 SAMN22708632 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034326/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 13 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855791 SAMN22708627 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034332/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855792 SAMN22708628 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034331/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855793 SAMN22708626 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034333/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855794 SAMN22708625 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034334/2021 collected_by Fulgent Genetics collection_date 2021-05-06 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855795 SAMN22708624 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034335/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855796 SAMN22708623 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034336/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855797 SAMN22708622 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034337/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 6 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855798 SAMN22708621 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034338/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 4 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855799 SAMN22708620 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034339/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855800 SAMN22708619 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034340/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855801 SAMN22708618 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034341/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855802 SAMN22708617 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034342/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 12 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855803 SAMN22708616 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034343/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 6 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855804 SAMN22708615 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034344/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855805 SAMN22708614 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034345/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855806 SAMN22708613 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034346/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 13 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855807 SAMN22708886 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034890/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855808 SAMN22708885 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034891/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855809 SAMN22708884 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034892/2021 collected_by Fulgent Genetics collection_date 2021-05-18 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855810 SAMN22708883 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034893/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855811 SAMN22708882 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034894/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.429 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855812 SAMN22708881 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034895/2021 collected_by Fulgent Genetics collection_date 2021-05-18 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855813 SAMN22708880 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034896/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 9 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855814 SAMN22708681 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034877/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855815 SAMN22708760 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034897/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 10 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855816 SAMN22708878 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034900/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855817 SAMN22708879 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034898/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855818 SAMN22708895 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034878/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855819 SAMN22708894 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034879/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 37 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855820 SAMN22708875 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034903/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 11 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855821 SAMN22708874 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034904/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 67 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855822 SAMN22708873 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034905/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 50 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855823 SAMN22708872 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034906/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 73 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855824 SAMN22708870 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034908/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855825 SAMN22708871 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034907/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 58 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855826 SAMN22708869 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034909/2021 collected_by Fulgent Genetics collection_date 2021-05-18 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855827 SAMN22708868 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034910/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 22 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855828 SAMN22708867 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034912/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 13 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855829 SAMN22708865 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034914/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855830 SAMN22708866 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034913/2021 collected_by Fulgent Genetics collection_date 2021-05-18 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855831 SAMN22708864 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034915/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.621 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855832 SAMN22708759 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034917/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855833 SAMN22708863 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034918/2021 collected_by Fulgent Genetics collection_date 2021-05-15 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855834 SAMN22708862 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034919/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 21 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855835 SAMN22708861 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034920/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855836 SAMN22708860 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034921/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855837 SAMN22708859 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034922/2021 collected_by Fulgent Genetics collection_date 2021-05-18 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 13 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855838 SAMN22708612 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034347/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855839 SAMN22708858 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034923/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855840 SAMN22708631 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034327/2021 collected_by Fulgent Genetics collection_date 2021-05-06 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855841 SAMN22708630 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034328/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 74 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855842 SAMN22708629 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034329/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855843 SAMN22708606 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034354/2021 collected_by Fulgent Genetics collection_date 2021-05-06 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855844 SAMN22708605 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034355/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855845 SAMN22708604 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034356/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855846 SAMN22708603 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034357/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855847 SAMN22708602 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034358/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855848 SAMN22708601 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034359/2021 collected_by Fulgent Genetics collection_date 2021-05-06 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855849 SAMN22708600 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034360/2021 collected_by Fulgent Genetics collection_date 2021-05-06 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855850 SAMN22708599 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034361/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.429 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855851 SAMN22708598 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034362/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855852 SAMN22708597 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034364/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855853 SAMN22708596 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034365/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.429 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855854 SAMN22708595 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034366/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age <1 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855855 SAMN22708593 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034368/2021 collected_by Fulgent Genetics collection_date 2021-05-06 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855856 SAMN22708594 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034367/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 7 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855857 SAMN22708716 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034391/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855858 SAMN22708715 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034392/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855859 SAMN22708847 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034397/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855860 SAMN22708611 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034348/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855861 SAMN22708610 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034349/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855862 SAMN22708609 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034351/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855863 SAMN22708608 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034352/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855864 SAMN22708607 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034353/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source RNA geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Unknown collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 TaqPath diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 TaqPath diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855865 SAMN22708846 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034398/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 64 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855866 SAMN22708756 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-034406/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855867 SAMN22708843 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034408/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855868 SAMN22708755 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-034409/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855869 SAMN22708842 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034410/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855870 SAMN22708714 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034411/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855871 SAMN22708733 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-034412/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855872 SAMN22708732 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-034415/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855873 SAMN22708840 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034417/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855874 SAMN22708841 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034416/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855875 SAMN22708713 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034418/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 3 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855876 SAMN22708839 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034421/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855877 SAMN22708838 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034426/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855878 SAMN22708712 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034423/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855879 SAMN22708711 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034431/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855880 SAMN22708754 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-034428/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855881 SAMN22708753 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-034433/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855882 SAMN22708710 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034434/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855883 SAMN22708837 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034435/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855884 SAMN22708836 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034436/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855885 SAMN22708845 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034400/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855886 SAMN22708844 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034404/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 4 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855887 SAMN22708835 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034437/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855888 SAMN22708585 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WV-CDC-FG-034445/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: West Virginia host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 48 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855889 SAMN22708833 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034446/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855890 SAMN22708832 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034450/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855891 SAMN22708831 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034453/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855892 SAMN22708708 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034455/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855893 SAMN22708751 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-034458/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855894 SAMN22708830 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034459/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855895 SAMN22708750 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-034464/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855896 SAMN22708829 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034466/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 72 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855897 SAMN22708828 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034467/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855898 SAMN22708827 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034469/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 4 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855899 SAMN22708826 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034470/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855900 SAMN22708749 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-034474/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855901 SAMN22708825 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034472/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855902 SAMN22708857 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034924/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855903 SAMN22708748 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-034478/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855904 SAMN22708876 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034902/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855905 SAMN22708853 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034928/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855906 SAMN22708877 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034901/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 26 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855907 SAMN22708852 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034929/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 6 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855908 SAMN22708851 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034930/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855909 SAMN22708850 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034931/2021 collected_by Fulgent Genetics collection_date 2021-05-16 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 11.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855910 SAMN22708849 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034932/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855911 SAMN22708758 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034934/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855912 SAMN22708848 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034933/2021 collected_by Fulgent Genetics collection_date 2021-05-16 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855913 SAMN22708586 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-034935/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855914 SAMN22708757 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034937/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 59 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855915 SAMN22708856 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034925/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasopharyngeal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 65 host_race UNK collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855916 SAMN22708855 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034926/2021 collected_by Fulgent Genetics collection_date 2021-05-18 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855917 SAMN22708854 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034927/2021 collected_by Fulgent Genetics collection_date 2021-05-17 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 72 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855918 SAMN22708824 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034479/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 58 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855919 SAMN22708823 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034482/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855920 SAMN22708747 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-034480/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855921 SAMN22708731 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-034483/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source nasal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 23 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855922 SAMN22708834 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034438/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855923 SAMN22708707 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034487/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 6 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855924 SAMN22708752 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-034440/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855925 SAMN22708709 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034442/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855926 SAMN22709079 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034491/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855927 SAMN22708822 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034492/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855928 SAMN22708705 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034494/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855929 SAMN22708704 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034496/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855930 SAMN22708738 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/MI-CDC-FG-034497/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Michigan host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 29.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855931 SAMN22708717 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TN-CDC-FG-034502/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Tennessee host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC COVID-19 diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC COVID-19 diagnostic_pcr_Ct_value_2 22.8 diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC COVID-19 diagnostic_pcr_Ct_value_3 23.5 lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855932 SAMN22708821 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034499/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855933 SAMN22708820 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034503/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 12 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855934 SAMN22708818 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034507/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 76 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855935 SAMN22708819 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034506/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855936 SAMN22708703 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034509/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855937 SAMN22708589 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WI-CDC-FG-034510/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855938 SAMN22709078 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034515/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855939 SAMN22708702 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034517/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 1 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855940 SAMN22709077 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034519/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855941 SAMN22708817 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034520/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855942 SAMN22709076 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034522/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855943 SAMN22708701 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034523/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855944 SAMN22708745 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-034524/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855945 SAMN22708730 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-034526/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 23 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855946 SAMN22708706 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034488/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855947 SAMN22708746 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-034490/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855948 SAMN22708816 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034533/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855949 SAMN22709073 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034534/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855950 SAMN22708815 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034537/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855951 SAMN22708719 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/PR-CDC-FG-034539/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Puerto Rico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 37 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855952 SAMN22709072 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034542/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855953 SAMN22709071 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034543/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855954 SAMN22708700 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034544/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 3 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855955 SAMN22709070 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034545/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.621 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855956 SAMN22709069 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034547/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855957 SAMN22708736 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NE-CDC-FG-034546/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Nebraska host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855958 SAMN22709068 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034548/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855959 SAMN22708814 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034549/2021 collected_by Fulgent Genetics collection_date 2021-05-08 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855960 SAMN22708728 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-034550/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855961 SAMN22709067 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034551/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855962 SAMN22709066 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034553/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855963 SAMN22708813 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034555/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855964 SAMN22709065 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034554/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 61 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855965 SAMN22709064 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034557/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855966 SAMN22709063 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034558/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855967 SAMN22709062 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034559/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855968 SAMN22709075 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034528/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855969 SAMN22709074 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034530/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 63 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855970 SAMN22708729 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-034531/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855971 SAMN22709059 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034563/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855972 SAMN22709058 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034564/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 7 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855973 SAMN22709057 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034566/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855974 SAMN22708812 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034565/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855975 SAMN22709056 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034567/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855976 SAMN22709055 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034568/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855977 SAMN22709054 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034570/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855978 SAMN22708699 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034569/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855979 SAMN22709053 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034571/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 4 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855980 SAMN22709052 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034572/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855981 SAMN22708727 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-034573/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855982 SAMN22708698 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034574/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855983 SAMN22709051 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034575/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 11 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855984 SAMN22709061 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034560/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855985 SAMN22709042 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034586/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855986 SAMN22709060 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034561/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855987 SAMN22709041 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034587/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855988 SAMN22709040 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034588/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855989 SAMN22709037 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034591/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855990 SAMN22709039 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034589/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855991 SAMN22709038 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034590/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855992 SAMN22709036 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034592/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855993 SAMN22708811 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034593/2021 collected_by Fulgent Genetics collection_date 2021-05-07 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855994 SAMN22708735 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NV-CDC-FG-034594/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855995 SAMN22709035 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034595/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855996 SAMN22708734 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NV-CDC-FG-034596/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855997 SAMN22709034 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034597/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855998 SAMN22709050 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034576/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10855999 SAMN22709049 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034577/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856000 SAMN22709048 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034578/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856001 SAMN22709046 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034580/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 70 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856002 SAMN22709045 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034581/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856003 SAMN22709047 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034579/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856004 SAMN22708697 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034583/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856005 SAMN22709044 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034584/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856006 SAMN22708726 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/OH-CDC-FG-034582/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasopharyngeal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race UNK collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856007 SAMN22709043 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034585/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 13 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856008 SAMN22708695 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034602/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856009 SAMN22708696 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034601/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856010 SAMN22709031 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034604/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856011 SAMN22709032 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034603/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856012 SAMN22709030 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034605/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856013 SAMN22709029 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034606/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856014 SAMN22708808 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034607/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856015 SAMN22708807 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034608/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856016 SAMN22708806 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034609/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856017 SAMN22709028 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034610/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856018 SAMN22709027 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034611/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 3 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856019 SAMN22709026 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034612/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856020 SAMN22708810 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034598/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 69 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856021 SAMN22709025 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034613/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.36.21 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856022 SAMN22709024 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034614/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856023 SAMN22708743 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-034616/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.526 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856024 SAMN22708744 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-034615/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856025 SAMN22708805 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034617/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856026 SAMN22709023 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034618/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856027 SAMN22708694 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-034619/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856028 SAMN22709022 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034620/2021 collected_by Fulgent Genetics collection_date 2021-05-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name C.37 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856029 SAMN22709033 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034599/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856030 SAMN22708809 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034600/2021 collected_by Fulgent Genetics collection_date 2021-05-11 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856031 SAMN22708592 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/WA-CDC-FG-034623/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC COVID-19 diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC COVID-19 diagnostic_pcr_Ct_value_2 15.7 diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC COVID-19 diagnostic_pcr_Ct_value_3 16.1 lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856032 SAMN22709019 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034624/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856033 SAMN22708804 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034625/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 82 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856034 SAMN22709018 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034626/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856035 SAMN22709016 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034628/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856036 SAMN22709017 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034627/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856037 SAMN22708803 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034629/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856038 SAMN22709015 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034630/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856039 SAMN22709014 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034631/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856040 SAMN22709013 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034633/2021 collected_by Fulgent Genetics collection_date 2021-05-14 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856041 SAMN22708802 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034632/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856042 SAMN22708801 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CO-CDC-FG-034634/2021 collected_by Fulgent Genetics collection_date 2021-05-10 isolation_source nasal swab geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856043 SAMN22708742 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-034635/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856044 SAMN22708741 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/FL-CDC-FG-034636/2021 collected_by Fulgent Genetics collection_date 2021-05-09 isolation_source nasal swab geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10856045 SAMN22709012 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-034637/2021 collected_by Fulgent Genetics collection_date 2021-05-13 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 12 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated