<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT accession="SRX13790804" alias="GSM5819638_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX13790804</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM5819638_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM5819638: wild-type rep A; Bacteroides thetaiotaomicron; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP355111">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP355111</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA797434</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS11673346">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS11673346</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5819638</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM5819638</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>QIAzol lysis reagent and miRNeasy Mini Kit (Qiagen) rRNA was removed with the Bacterial RiboMinus Transcriptome Isolation Kit (Invitrogen) and the library prepared with the TruSeq Stranded Total RNA Library Kit (Illumina)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 3000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX13790805" alias="GSM5819639_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX13790805</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM5819639_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM5819639: wild-type rep B; Bacteroides thetaiotaomicron; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP355111">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP355111</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA797434</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS11673347">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS11673347</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5819639</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM5819639</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>QIAzol lysis reagent and miRNeasy Mini Kit (Qiagen) rRNA was removed with the Bacterial RiboMinus Transcriptome Isolation Kit (Invitrogen) and the library prepared with the TruSeq Stranded Total RNA Library Kit (Illumina)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 3000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX13790806" alias="GSM5819640_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX13790806</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM5819640_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM5819640: ΔBT_1522 rep A; Bacteroides thetaiotaomicron; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP355111">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP355111</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA797434</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS11673348">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS11673348</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5819640</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM5819640</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>QIAzol lysis reagent and miRNeasy Mini Kit (Qiagen) rRNA was removed with the Bacterial RiboMinus Transcriptome Isolation Kit (Invitrogen) and the library prepared with the TruSeq Stranded Total RNA Library Kit (Illumina)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 3000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX13790807" alias="GSM5819641_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX13790807</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM5819641_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM5819641: ΔBT_1522 rep B; Bacteroides thetaiotaomicron; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP355111">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP355111</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA797434</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS11673349">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS11673349</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5819641</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM5819641</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>QIAzol lysis reagent and miRNeasy Mini Kit (Qiagen) rRNA was removed with the Bacterial RiboMinus Transcriptome Isolation Kit (Invitrogen) and the library prepared with the TruSeq Stranded Total RNA Library Kit (Illumina)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 3000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX13790808" alias="GSM5819642_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX13790808</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM5819642_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM5819642: iSPT rep A; Bacteroides thetaiotaomicron; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP355111">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP355111</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA797434</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS11673350">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS11673350</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5819642</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM5819642</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>QIAzol lysis reagent and miRNeasy Mini Kit (Qiagen) rRNA was removed with the Bacterial RiboMinus Transcriptome Isolation Kit (Invitrogen) and the library prepared with the TruSeq Stranded Total RNA Library Kit (Illumina)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 3000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX13790809" alias="GSM5819643_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX13790809</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM5819643_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM5819643: iSPT rep B; Bacteroides thetaiotaomicron; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP355111">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP355111</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA797434</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS11673351">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS11673351</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5819643</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM5819643</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>QIAzol lysis reagent and miRNeasy Mini Kit (Qiagen) rRNA was removed with the Bacterial RiboMinus Transcriptome Isolation Kit (Invitrogen) and the library prepared with the TruSeq Stranded Total RNA Library Kit (Illumina)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 3000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX13790810" alias="GSM5819644_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX13790810</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM5819644_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM5819644: iSPTΔBT_1526 rep A; Bacteroides thetaiotaomicron; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP355111">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP355111</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA797434</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS11673352">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS11673352</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5819644</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM5819644</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>QIAzol lysis reagent and miRNeasy Mini Kit (Qiagen) rRNA was removed with the Bacterial RiboMinus Transcriptome Isolation Kit (Invitrogen) and the library prepared with the TruSeq Stranded Total RNA Library Kit (Illumina)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 3000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX13790811" alias="GSM5819645_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX13790811</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM5819645_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM5819645: iSPTΔBT_1526 rep B; Bacteroides thetaiotaomicron; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP355111">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP355111</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA797434</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS11673353">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS11673353</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5819645</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM5819645</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>QIAzol lysis reagent and miRNeasy Mini Kit (Qiagen) rRNA was removed with the Bacterial RiboMinus Transcriptome Isolation Kit (Invitrogen) and the library prepared with the TruSeq Stranded Total RNA Library Kit (Illumina)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 3000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
