SRS12149636 SAMN26348470 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907757 isolation_source patient isolate gisaid_accession EPI_ISL_10257258 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907757/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149637 SAMN26348471 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907920 isolation_source patient isolate gisaid_accession EPI_ISL_10257259 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907920/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149638 SAMN26348472 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-29 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906402 isolation_source patient isolate gisaid_accession EPI_ISL_10257260 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906402/2021 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149639 SAMN26348473 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907564 isolation_source patient isolate gisaid_accession EPI_ISL_10257261 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907564/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149640 SAMN26348474 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-12 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102646739 isolation_source patient isolate gisaid_accession EPI_ISL_10257262 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102646739/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149642 SAMN26348475 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916613 isolation_source patient isolate gisaid_accession EPI_ISL_10257263 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916613/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149643 SAMN26348477 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102827379 isolation_source patient isolate gisaid_accession EPI_ISL_10257265 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102827379/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149644 SAMN26347875 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915435 isolation_source patient isolate gisaid_accession EPI_ISL_10256662 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915435/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149645 SAMN26348478 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906912 isolation_source patient isolate gisaid_accession EPI_ISL_10257266 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906912/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149646 SAMN26348480 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916939 isolation_source patient isolate gisaid_accession EPI_ISL_10257268 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916939/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149647 SAMN26348479 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102665260 isolation_source patient isolate gisaid_accession EPI_ISL_10257267 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102665260/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149648 SAMN26348481 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-29 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906492 isolation_source patient isolate gisaid_accession EPI_ISL_10257269 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906492/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149649 SAMN26348482 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102889088 isolation_source patient isolate gisaid_accession EPI_ISL_10257270 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102889088/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149650 SAMN26348484 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916991 isolation_source patient isolate gisaid_accession EPI_ISL_10257272 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916991/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149651 SAMN26348483 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907766 isolation_source patient isolate gisaid_accession EPI_ISL_10257271 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907766/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149652 SAMN26348485 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-28 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900639 isolation_source patient isolate gisaid_accession EPI_ISL_10257273 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900639/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149653 SAMN26348486 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-17 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102779685 isolation_source patient isolate gisaid_accession EPI_ISL_10257274 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102779685/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149654 SAMN26347876 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915440 isolation_source patient isolate gisaid_accession EPI_ISL_10256663 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915440/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149655 SAMN26348487 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-28 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102526824 isolation_source patient isolate gisaid_accession EPI_ISL_10257275 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102526824/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149656 SAMN26348488 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102902413 isolation_source patient isolate gisaid_accession EPI_ISL_10257276 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102902413/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149657 SAMN26348489 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916978 isolation_source patient isolate gisaid_accession EPI_ISL_10257277 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916978/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149658 SAMN26348101 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916000 isolation_source patient isolate gisaid_accession EPI_ISL_10256890 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916000/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149659 SAMN26348102 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907728 isolation_source patient isolate gisaid_accession EPI_ISL_10256891 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907728/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149660 SAMN26348103 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907925 isolation_source patient isolate gisaid_accession EPI_ISL_10256892 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907925/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149661 SAMN26348104 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916158 isolation_source patient isolate gisaid_accession EPI_ISL_10256893 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916158/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149662 SAMN26348105 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907608 isolation_source patient isolate gisaid_accession EPI_ISL_10256894 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907608/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149663 SAMN26348106 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907637 isolation_source patient isolate gisaid_accession EPI_ISL_10256895 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907637/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149664 SAMN26348107 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102921556 isolation_source patient isolate gisaid_accession EPI_ISL_10256896 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102921556/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149665 SAMN26347811 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906605 isolation_source patient isolate gisaid_accession EPI_ISL_10256598 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906605/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149666 SAMN26347838 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916002 isolation_source patient isolate gisaid_accession EPI_ISL_10256625 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916002/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149667 SAMN26348109 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906680 isolation_source patient isolate gisaid_accession EPI_ISL_10256898 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906680/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149668 SAMN26348108 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916691 isolation_source patient isolate gisaid_accession EPI_ISL_10256897 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916691/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149669 SAMN26348110 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916199 isolation_source patient isolate gisaid_accession EPI_ISL_10256899 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916199/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149670 SAMN26348111 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907744 isolation_source patient isolate gisaid_accession EPI_ISL_10256900 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907744/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149671 SAMN26348112 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916726 isolation_source patient isolate gisaid_accession EPI_ISL_10256901 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916726/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149672 SAMN26348113 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102665437 isolation_source patient isolate gisaid_accession EPI_ISL_10256902 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102665437/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149673 SAMN26348114 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906529 isolation_source patient isolate gisaid_accession EPI_ISL_10256903 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906529/2021 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149679 SAMN26348120 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102921566 isolation_source patient isolate gisaid_accession EPI_ISL_10256909 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102921566/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149693 SAMN26348132 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102888897 isolation_source patient isolate gisaid_accession EPI_ISL_10256921 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102888897/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149695 SAMN26347813 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102657100 isolation_source patient isolate gisaid_accession EPI_ISL_10256600 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102657100/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149697 SAMN26347858 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906558 isolation_source patient isolate gisaid_accession EPI_ISL_10256645 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906558/2021 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149699 SAMN26348310 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916584 isolation_source patient isolate gisaid_accession EPI_ISL_10257099 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916584/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149701 SAMN26348312 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102853229 isolation_source patient isolate gisaid_accession EPI_ISL_10257101 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102853229/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149703 SAMN26348314 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-17 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102779683 isolation_source patient isolate gisaid_accession EPI_ISL_10257103 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102779683/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149641 SAMN26348476 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916081 isolation_source patient isolate gisaid_accession EPI_ISL_10257264 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916081/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149674 SAMN26348115 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-25 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102889447 isolation_source patient isolate gisaid_accession EPI_ISL_10256904 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102889447/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149675 SAMN26348116 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916070 isolation_source patient isolate gisaid_accession EPI_ISL_10256905 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916070/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149676 SAMN26348117 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906747 isolation_source patient isolate gisaid_accession EPI_ISL_10256906 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906747/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149677 SAMN26347839 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906663 isolation_source patient isolate gisaid_accession EPI_ISL_10256626 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906663/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149678 SAMN26348118 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916678 isolation_source patient isolate gisaid_accession EPI_ISL_10256907 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916678/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149680 SAMN26348119 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907121 isolation_source patient isolate gisaid_accession EPI_ISL_10256908 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907121/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149681 SAMN26348121 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915764 isolation_source patient isolate gisaid_accession EPI_ISL_10256910 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915764/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149682 SAMN26348122 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917202 isolation_source patient isolate gisaid_accession EPI_ISL_10256911 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917202/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149683 SAMN26348123 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917013 isolation_source patient isolate gisaid_accession EPI_ISL_10256912 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917013/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149684 SAMN26348124 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916210 isolation_source patient isolate gisaid_accession EPI_ISL_10256913 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916210/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149685 SAMN26348125 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916845 isolation_source patient isolate gisaid_accession EPI_ISL_10256914 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916845/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149686 SAMN26348126 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916198 isolation_source patient isolate gisaid_accession EPI_ISL_10256915 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916198/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149687 SAMN26347840 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906384 isolation_source patient isolate gisaid_accession EPI_ISL_10256627 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906384/2021 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149688 SAMN26348127 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102656896 isolation_source patient isolate gisaid_accession EPI_ISL_10256916 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102656896/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149689 SAMN26348128 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906655 isolation_source patient isolate gisaid_accession EPI_ISL_10256917 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906655/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149690 SAMN26348129 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915972 isolation_source patient isolate gisaid_accession EPI_ISL_10256918 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915972/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149691 SAMN26348130 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916957 isolation_source patient isolate gisaid_accession EPI_ISL_10256919 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916957/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149692 SAMN26348131 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102828033 isolation_source patient isolate gisaid_accession EPI_ISL_10256920 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102828033/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149694 SAMN26348307 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102828106 isolation_source patient isolate gisaid_accession EPI_ISL_10257096 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102828106/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149696 SAMN26348308 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916874 isolation_source patient isolate gisaid_accession EPI_ISL_10257097 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916874/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149698 SAMN26348309 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-28 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102529675 isolation_source patient isolate gisaid_accession EPI_ISL_10257098 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102529675/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149700 SAMN26348311 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916623 isolation_source patient isolate gisaid_accession EPI_ISL_10257100 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916623/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149702 SAMN26348313 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102901482 isolation_source patient isolate gisaid_accession EPI_ISL_10257102 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102901482/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149704 SAMN26348316 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916017 isolation_source patient isolate gisaid_accession EPI_ISL_10257105 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916017/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149705 SAMN26348315 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907930 isolation_source patient isolate gisaid_accession EPI_ISL_10257104 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907930/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149706 SAMN26348317 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916689 isolation_source patient isolate gisaid_accession EPI_ISL_10257106 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916689/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149707 SAMN26347859 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906889 isolation_source patient isolate gisaid_accession EPI_ISL_10256646 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906889/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149708 SAMN26348318 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916901 isolation_source patient isolate gisaid_accession EPI_ISL_10257107 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916901/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149709 SAMN26348319 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906416 isolation_source patient isolate gisaid_accession EPI_ISL_10257108 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906416/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149710 SAMN26348321 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916801 isolation_source patient isolate gisaid_accession EPI_ISL_10497422 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916801/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149711 SAMN26348320 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102522318 isolation_source patient isolate gisaid_accession EPI_ISL_10257109 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102522318/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149712 SAMN26348322 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907741 isolation_source patient isolate gisaid_accession EPI_ISL_10257110 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907741/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149713 SAMN26348323 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916062 isolation_source patient isolate gisaid_accession EPI_ISL_10257111 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916062/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149714 SAMN26348324 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102661767 isolation_source patient isolate gisaid_accession EPI_ISL_10257112 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102661767/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149715 SAMN26348325 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916852 isolation_source patient isolate gisaid_accession EPI_ISL_10257113 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916852/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149716 SAMN26348327 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907097 isolation_source patient isolate gisaid_accession EPI_ISL_10257115 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907097/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149717 SAMN26348326 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906441 isolation_source patient isolate gisaid_accession EPI_ISL_10257114 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906441/2021 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149718 SAMN26347938 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906481 isolation_source patient isolate gisaid_accession EPI_ISL_10256727 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906481/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149719 SAMN26347939 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102646311 isolation_source patient isolate gisaid_accession EPI_ISL_10256728 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102646311/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149720 SAMN26347941 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915462 isolation_source patient isolate gisaid_accession EPI_ISL_10256730 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915462/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149721 SAMN26347940 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915679 isolation_source patient isolate gisaid_accession EPI_ISL_10256729 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915679/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149722 SAMN26347942 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917179 isolation_source patient isolate gisaid_accession EPI_ISL_10256731 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917179/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149723 SAMN26347943 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907682 isolation_source patient isolate gisaid_accession EPI_ISL_10256732 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907682/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149724 SAMN26347944 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907699 isolation_source patient isolate gisaid_accession EPI_ISL_10256733 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907699/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149725 SAMN26347946 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916676 isolation_source patient isolate gisaid_accession EPI_ISL_10256735 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916676/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149726 SAMN26347945 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907095 isolation_source patient isolate gisaid_accession EPI_ISL_10256734 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907095/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149727 SAMN26347947 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102662311 isolation_source patient isolate gisaid_accession EPI_ISL_10256736 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102662311/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149728 SAMN26347822 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916614 isolation_source patient isolate gisaid_accession EPI_ISL_10256609 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916614/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149729 SAMN26347949 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906273 isolation_source patient isolate gisaid_accession EPI_ISL_10256738 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906273/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149730 SAMN26347948 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907706 isolation_source patient isolate gisaid_accession EPI_ISL_10256737 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907706/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149731 SAMN26347950 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907123 isolation_source patient isolate gisaid_accession EPI_ISL_10256739 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907123/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149732 SAMN26347951 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916638 isolation_source patient isolate gisaid_accession EPI_ISL_10256740 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916638/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149733 SAMN26347952 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916640 isolation_source patient isolate gisaid_accession EPI_ISL_10297120 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916640/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149734 SAMN26347954 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916625 isolation_source patient isolate gisaid_accession EPI_ISL_10256742 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916625/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149735 SAMN26347953 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915993 isolation_source patient isolate gisaid_accession EPI_ISL_10256741 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915993/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149736 SAMN26347955 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-20 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906935 isolation_source patient isolate gisaid_accession EPI_ISL_10256743 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906935/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149737 SAMN26347957 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907748 isolation_source patient isolate gisaid_accession EPI_ISL_10256745 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907748/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149738 SAMN26347956 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917184 isolation_source patient isolate gisaid_accession EPI_ISL_10256744 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917184/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149739 SAMN26347823 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916897 isolation_source patient isolate gisaid_accession EPI_ISL_10256610 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916897/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149740 SAMN26347958 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916054 isolation_source patient isolate gisaid_accession EPI_ISL_10256746 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916054/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149741 SAMN26347959 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916633 isolation_source patient isolate gisaid_accession EPI_ISL_10256747 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916633/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149742 SAMN26347960 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915943 isolation_source patient isolate gisaid_accession EPI_ISL_10256748 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915943/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149743 SAMN26347962 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907703 isolation_source patient isolate gisaid_accession EPI_ISL_10256750 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907703/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149744 SAMN26347961 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916637 isolation_source patient isolate gisaid_accession EPI_ISL_10256749 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916637/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149745 SAMN26347963 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102522226 isolation_source patient isolate gisaid_accession EPI_ISL_10256751 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102522226/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149746 SAMN26347964 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916621 isolation_source patient isolate gisaid_accession EPI_ISL_10256752 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916621/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149747 SAMN26347966 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916064 isolation_source patient isolate gisaid_accession EPI_ISL_10256754 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916064/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149748 SAMN26347965 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915507 isolation_source patient isolate gisaid_accession EPI_ISL_10256753 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915507/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149749 SAMN26347967 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916612 isolation_source patient isolate gisaid_accession EPI_ISL_10256755 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916612/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149750 SAMN26347824 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-14 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906865 isolation_source patient isolate gisaid_accession EPI_ISL_10256611 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906865/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149751 SAMN26347968 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915467 isolation_source patient isolate gisaid_accession EPI_ISL_10256756 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915467/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149752 SAMN26347970 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906540 isolation_source patient isolate gisaid_accession EPI_ISL_10256758 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906540/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149753 SAMN26347969 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906426 isolation_source patient isolate gisaid_accession EPI_ISL_10256757 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906426/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149754 SAMN26348393 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915981 isolation_source patient isolate gisaid_accession EPI_ISL_10257181 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915981/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149755 SAMN26348394 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102646293 isolation_source patient isolate gisaid_accession EPI_ISL_10257182 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102646293/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149756 SAMN26348396 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906564 isolation_source patient isolate gisaid_accession EPI_ISL_10257184 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906564/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149757 SAMN26348395 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917170 isolation_source patient isolate gisaid_accession EPI_ISL_10257183 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917170/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149758 SAMN26347867 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102635798 isolation_source patient isolate gisaid_accession EPI_ISL_10256654 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102635798/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149759 SAMN26348397 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102902587 isolation_source patient isolate gisaid_accession EPI_ISL_10257185 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102902587/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149760 SAMN26348398 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102858632 isolation_source patient isolate gisaid_accession EPI_ISL_10257186 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102858632/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149761 SAMN26348399 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906344 isolation_source patient isolate gisaid_accession EPI_ISL_10257187 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906344/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149762 SAMN26348400 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907764 isolation_source patient isolate gisaid_accession EPI_ISL_10257188 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907764/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149763 SAMN26348401 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907848 isolation_source patient isolate gisaid_accession EPI_ISL_10257189 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907848/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149764 SAMN26348402 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102924052 isolation_source patient isolate gisaid_accession EPI_ISL_10257190 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102924052/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149765 SAMN26348404 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102850504 isolation_source patient isolate gisaid_accession EPI_ISL_10257192 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102850504/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149766 SAMN26348403 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906974 isolation_source patient isolate gisaid_accession EPI_ISL_10257191 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906974/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149767 SAMN26348405 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916750 isolation_source patient isolate gisaid_accession EPI_ISL_10257193 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916750/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149768 SAMN26348406 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916744 isolation_source patient isolate gisaid_accession EPI_ISL_10257194 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916744/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149769 SAMN26348407 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907069 isolation_source patient isolate gisaid_accession EPI_ISL_10257195 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907069/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149770 SAMN26347814 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906660 isolation_source patient isolate gisaid_accession EPI_ISL_10256601 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906660/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149771 SAMN26347868 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102637159 isolation_source patient isolate gisaid_accession EPI_ISL_10256655 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102637159/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149772 SAMN26348408 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907903 isolation_source patient isolate gisaid_accession EPI_ISL_10257196 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907903/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149773 SAMN26348409 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916707 isolation_source patient isolate gisaid_accession EPI_ISL_10257197 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916707/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149774 SAMN26348410 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900886 isolation_source patient isolate gisaid_accession EPI_ISL_10257198 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900886/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149775 SAMN26348411 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102901255 isolation_source patient isolate gisaid_accession EPI_ISL_10257199 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102901255/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149776 SAMN26348412 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906541 isolation_source patient isolate gisaid_accession EPI_ISL_10257200 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906541/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149777 SAMN26348413 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916563 isolation_source patient isolate gisaid_accession EPI_ISL_10257201 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916563/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149778 SAMN26348414 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916789 isolation_source patient isolate gisaid_accession EPI_ISL_10257202 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916789/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149779 SAMN26348415 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916981 isolation_source patient isolate gisaid_accession EPI_ISL_10257203 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916981/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149780 SAMN26348417 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917175 isolation_source patient isolate gisaid_accession EPI_ISL_10257205 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917175/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149781 SAMN26348416 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907917 isolation_source patient isolate gisaid_accession EPI_ISL_10257204 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907917/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149782 SAMN26348418 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916790 isolation_source patient isolate gisaid_accession EPI_ISL_10257206 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916790/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149783 SAMN26347869 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906653 isolation_source patient isolate gisaid_accession EPI_ISL_10256656 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906653/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149784 SAMN26348419 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915559 isolation_source patient isolate gisaid_accession EPI_ISL_10257207 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915559/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149785 SAMN26348420 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906619 isolation_source patient isolate gisaid_accession EPI_ISL_10257208 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906619/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149786 SAMN26348421 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916797 isolation_source patient isolate gisaid_accession EPI_ISL_10257209 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916797/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149787 SAMN26348422 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102889069 isolation_source patient isolate gisaid_accession EPI_ISL_10257210 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102889069/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149788 SAMN26348423 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916641 isolation_source patient isolate gisaid_accession EPI_ISL_10257211 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916641/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149789 SAMN26348424 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907034 isolation_source patient isolate gisaid_accession EPI_ISL_10257212 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907034/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149790 SAMN26348036 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907652 isolation_source patient isolate gisaid_accession EPI_ISL_10256825 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907652/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149791 SAMN26348037 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907596 isolation_source patient isolate gisaid_accession EPI_ISL_10256826 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907596/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149792 SAMN26347831 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916736 isolation_source patient isolate gisaid_accession EPI_ISL_10256618 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916736/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149793 SAMN26348038 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915967 isolation_source patient isolate gisaid_accession EPI_ISL_10256827 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915967/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149794 SAMN26348039 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917166 isolation_source patient isolate gisaid_accession EPI_ISL_10256828 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917166/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149795 SAMN26348040 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916049 isolation_source patient isolate gisaid_accession EPI_ISL_10256829 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916049/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149796 SAMN26348041 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102664821 isolation_source patient isolate gisaid_accession EPI_ISL_10256830 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102664821/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149797 SAMN26348042 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907665 isolation_source patient isolate gisaid_accession EPI_ISL_10256831 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907665/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149798 SAMN26348043 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-29 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916016 isolation_source patient isolate gisaid_accession EPI_ISL_10256832 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916016/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149799 SAMN26348045 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916714 isolation_source patient isolate gisaid_accession EPI_ISL_10256834 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916714/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149800 SAMN26348044 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916752 isolation_source patient isolate gisaid_accession EPI_ISL_10256833 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916752/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149801 SAMN26348046 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915987 isolation_source patient isolate gisaid_accession EPI_ISL_10256835 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915987/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149802 SAMN26348047 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102853030 isolation_source patient isolate gisaid_accession EPI_ISL_10256836 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102853030/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149803 SAMN26347832 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906283 isolation_source patient isolate gisaid_accession EPI_ISL_10256619 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906283/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149804 SAMN26348048 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915564 isolation_source patient isolate gisaid_accession EPI_ISL_10256837 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915564/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149805 SAMN26348049 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916053 isolation_source patient isolate gisaid_accession EPI_ISL_10256838 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916053/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149806 SAMN26348050 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916021 isolation_source patient isolate gisaid_accession EPI_ISL_10256839 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916021/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149807 SAMN26348051 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907723 isolation_source patient isolate gisaid_accession EPI_ISL_10256840 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907723/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149808 SAMN26348052 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102646505 isolation_source patient isolate gisaid_accession EPI_ISL_10256841 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102646505/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149809 SAMN26348053 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916164 isolation_source patient isolate gisaid_accession EPI_ISL_10256842 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916164/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149810 SAMN26348054 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916013 isolation_source patient isolate gisaid_accession EPI_ISL_10256843 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916013/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149811 SAMN26348055 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-12 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102646800 isolation_source patient isolate gisaid_accession EPI_ISL_10256845 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102646800/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149812 SAMN26348056 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-15 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906849 isolation_source patient isolate gisaid_accession EPI_ISL_10256846 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906849/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149813 SAMN26348057 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916949 isolation_source patient isolate gisaid_accession EPI_ISL_10256847 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916949/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149814 SAMN26347833 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102924051 isolation_source patient isolate gisaid_accession EPI_ISL_10256620 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102924051/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149815 SAMN26348058 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916086 isolation_source patient isolate gisaid_accession EPI_ISL_10256848 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916086/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149816 SAMN26348059 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916007 isolation_source patient isolate gisaid_accession EPI_ISL_10256849 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916007/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149817 SAMN26348060 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907558 isolation_source patient isolate gisaid_accession EPI_ISL_10256850 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907558/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149818 SAMN26348061 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-18 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102697595 isolation_source patient isolate gisaid_accession EPI_ISL_10256851 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102697595/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149819 SAMN26348062 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916999 isolation_source patient isolate gisaid_accession EPI_ISL_10297122 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916999/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149820 SAMN26348063 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916761 isolation_source patient isolate gisaid_accession EPI_ISL_10256852 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916761/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149821 SAMN26348065 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-26 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102889083 isolation_source patient isolate gisaid_accession EPI_ISL_10256854 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102889083/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149822 SAMN26348064 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917158 isolation_source patient isolate gisaid_accession EPI_ISL_10256853 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917158/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149823 SAMN26348066 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102520762 isolation_source patient isolate gisaid_accession EPI_ISL_10256855 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102520762/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149824 SAMN26348067 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916065 isolation_source patient isolate gisaid_accession EPI_ISL_10256856 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916065/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149825 SAMN26347834 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-28 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906597 isolation_source patient isolate gisaid_accession EPI_ISL_10256621 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906597/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149826 SAMN26348198 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102889053 isolation_source patient isolate gisaid_accession EPI_ISL_10256987 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102889053/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149827 SAMN26348199 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907136 isolation_source patient isolate gisaid_accession EPI_ISL_10256988 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907136/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149828 SAMN26348200 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-29 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102880226 isolation_source patient isolate gisaid_accession EPI_ISL_10256989 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102880226/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149829 SAMN26348201 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907742 isolation_source patient isolate gisaid_accession EPI_ISL_10256990 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907742/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149830 SAMN26348202 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915991 isolation_source patient isolate gisaid_accession EPI_ISL_10256991 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915991/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149831 SAMN26348203 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907553 isolation_source patient isolate gisaid_accession EPI_ISL_10256992 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907553/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149832 SAMN26348204 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906550 isolation_source patient isolate gisaid_accession EPI_ISL_10256993 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906550/2021 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149833 SAMN26348205 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907889 isolation_source patient isolate gisaid_accession EPI_ISL_10256994 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907889/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149834 SAMN26348206 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907892 isolation_source patient isolate gisaid_accession EPI_ISL_10256995 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907892/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149835 SAMN26348207 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916191 isolation_source patient isolate gisaid_accession EPI_ISL_10256996 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916191/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149836 SAMN26347812 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907735 isolation_source patient isolate gisaid_accession EPI_ISL_10256599 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907735/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149837 SAMN26348208 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-20 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900364 isolation_source patient isolate gisaid_accession EPI_ISL_10256997 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900364/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149838 SAMN26347848 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915995 isolation_source patient isolate gisaid_accession EPI_ISL_10256635 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915995/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149839 SAMN26348209 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906437 isolation_source patient isolate gisaid_accession EPI_ISL_10256998 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906437/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149840 SAMN26348210 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102521844 isolation_source patient isolate gisaid_accession EPI_ISL_10256999 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102521844/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149841 SAMN26348211 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917171 isolation_source patient isolate gisaid_accession EPI_ISL_10257000 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917171/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149842 SAMN26348212 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-20 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102718628 isolation_source patient isolate gisaid_accession EPI_ISL_10257001 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102718628/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149843 SAMN26348213 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916146 isolation_source patient isolate gisaid_accession EPI_ISL_10257002 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916146/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149844 SAMN26348214 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102901483 isolation_source patient isolate gisaid_accession EPI_ISL_10257003 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102901483/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149845 SAMN26348215 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102901895 isolation_source patient isolate gisaid_accession EPI_ISL_10257004 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102901895/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149846 SAMN26348216 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916946 isolation_source patient isolate gisaid_accession EPI_ISL_10257005 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916946/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149847 SAMN26347849 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907715 isolation_source patient isolate gisaid_accession EPI_ISL_10256636 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907715/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149848 SAMN26348217 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102645512 isolation_source patient isolate gisaid_accession EPI_ISL_10257006 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102645512/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149849 SAMN26348219 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907049 isolation_source patient isolate gisaid_accession EPI_ISL_10257008 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907049/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149850 SAMN26348218 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915774 isolation_source patient isolate gisaid_accession EPI_ISL_10257007 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915774/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149851 SAMN26348220 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-25 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102888924 isolation_source patient isolate gisaid_accession EPI_ISL_10257009 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102888924/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149852 SAMN26348221 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907568 isolation_source patient isolate gisaid_accession EPI_ISL_10257010 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907568/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149853 SAMN26348222 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916580 isolation_source patient isolate gisaid_accession EPI_ISL_10257011 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916580/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149854 SAMN26348223 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-18 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102697687 isolation_source patient isolate gisaid_accession EPI_ISL_10257012 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102697687/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149855 SAMN26348224 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102848951 isolation_source patient isolate gisaid_accession EPI_ISL_10257013 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102848951/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149856 SAMN26348226 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907141 isolation_source patient isolate gisaid_accession EPI_ISL_10257015 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907141/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149857 SAMN26348225 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916961 isolation_source patient isolate gisaid_accession EPI_ISL_10257014 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916961/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149858 SAMN26348227 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102645383 isolation_source patient isolate gisaid_accession EPI_ISL_10257016 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102645383/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149859 SAMN26347850 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-12 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102646665 isolation_source patient isolate gisaid_accession EPI_ISL_10256637 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102646665/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149860 SAMN26348228 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907753 isolation_source patient isolate gisaid_accession EPI_ISL_10257017 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907753/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149861 SAMN26348229 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102635604 isolation_source patient isolate gisaid_accession EPI_ISL_10257018 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102635604/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149862 SAMN26348231 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915696 isolation_source patient isolate gisaid_accession EPI_ISL_10257020 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915696/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149863 SAMN26348230 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102659613 isolation_source patient isolate gisaid_accession EPI_ISL_10257019 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102659613/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149864 SAMN26348232 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916161 isolation_source patient isolate gisaid_accession EPI_ISL_10257021 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916161/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149865 SAMN26348233 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907696 isolation_source patient isolate gisaid_accession EPI_ISL_10257022 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907696/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149866 SAMN26348235 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906592 isolation_source patient isolate gisaid_accession EPI_ISL_10257024 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906592/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149867 SAMN26348234 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-17 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102779731 isolation_source patient isolate gisaid_accession EPI_ISL_10257023 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102779731/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149868 SAMN26348236 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102522281 isolation_source patient isolate gisaid_accession EPI_ISL_10257025 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102522281/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149869 SAMN26348237 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916184 isolation_source patient isolate gisaid_accession EPI_ISL_10257026 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916184/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149870 SAMN26347851 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916028 isolation_source patient isolate gisaid_accession EPI_ISL_10256638 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916028/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149871 SAMN26348238 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916907 isolation_source patient isolate gisaid_accession EPI_ISL_10257027 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916907/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149872 SAMN26348239 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916974 isolation_source patient isolate gisaid_accession EPI_ISL_10257028 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916974/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149873 SAMN26348240 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102924966 isolation_source patient isolate gisaid_accession EPI_ISL_10257029 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102924966/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149874 SAMN26348241 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907761 isolation_source patient isolate gisaid_accession EPI_ISL_10257030 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907761/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149875 SAMN26348242 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917151 isolation_source patient isolate gisaid_accession EPI_ISL_10257031 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917151/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149876 SAMN26348243 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916080 isolation_source patient isolate gisaid_accession EPI_ISL_10257032 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916080/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149877 SAMN26348245 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102646097 isolation_source patient isolate gisaid_accession EPI_ISL_10257034 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102646097/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149878 SAMN26348244 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917029 isolation_source patient isolate gisaid_accession EPI_ISL_10257033 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917029/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149879 SAMN26348246 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916679 isolation_source patient isolate gisaid_accession EPI_ISL_10257035 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916679/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149880 SAMN26347852 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102522089 isolation_source patient isolate gisaid_accession EPI_ISL_10256639 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102522089/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149881 SAMN26348247 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102888885 isolation_source patient isolate gisaid_accession EPI_ISL_10257036 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102888885/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149882 SAMN26348248 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916077 isolation_source patient isolate gisaid_accession EPI_ISL_10257037 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916077/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149883 SAMN26348249 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916143 isolation_source patient isolate gisaid_accession EPI_ISL_10257038 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916143/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149884 SAMN26348250 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102523264 isolation_source patient isolate gisaid_accession EPI_ISL_10257039 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102523264/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149885 SAMN26348251 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-28 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900624 isolation_source patient isolate gisaid_accession EPI_ISL_10257040 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900624/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149886 SAMN26348253 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916067 isolation_source patient isolate gisaid_accession EPI_ISL_10257042 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916067/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149887 SAMN26348252 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-28 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900554 isolation_source patient isolate gisaid_accession EPI_ISL_10257041 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900554/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149888 SAMN26348254 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907733 isolation_source patient isolate gisaid_accession EPI_ISL_10257043 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907733/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149889 SAMN26348255 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916956 isolation_source patient isolate gisaid_accession EPI_ISL_10257044 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916956/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149890 SAMN26348256 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907756 isolation_source patient isolate gisaid_accession EPI_ISL_10257045 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907756/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149891 SAMN26348257 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907086 isolation_source patient isolate gisaid_accession EPI_ISL_10257046 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907086/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149892 SAMN26347853 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102924056 isolation_source patient isolate gisaid_accession EPI_ISL_10256640 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102924056/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149893 SAMN26348258 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-17 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102779669 isolation_source patient isolate gisaid_accession EPI_ISL_10257047 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102779669/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149894 SAMN26348260 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915990 isolation_source patient isolate gisaid_accession EPI_ISL_10257049 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915990/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149895 SAMN26348259 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916886 isolation_source patient isolate gisaid_accession EPI_ISL_10257048 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916886/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149896 SAMN26348261 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907906 isolation_source patient isolate gisaid_accession EPI_ISL_10257050 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907906/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149897 SAMN26348262 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906269 isolation_source patient isolate gisaid_accession EPI_ISL_10257051 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906269/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149898 SAMN26348522 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907033 isolation_source patient isolate gisaid_accession EPI_ISL_10257310 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907033/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149899 SAMN26348524 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102849139 isolation_source patient isolate gisaid_accession EPI_ISL_10257312 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102849139/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149900 SAMN26348523 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102849172 isolation_source patient isolate gisaid_accession EPI_ISL_10257311 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102849172/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149901 SAMN26348525 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907107 isolation_source patient isolate gisaid_accession EPI_ISL_10257313 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907107/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149902 SAMN26348526 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917167 isolation_source patient isolate gisaid_accession EPI_ISL_10257314 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917167/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149903 SAMN26348527 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900746 isolation_source patient isolate gisaid_accession EPI_ISL_10257315 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900746/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149904 SAMN26347880 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916913 isolation_source patient isolate gisaid_accession EPI_ISL_10256667 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916913/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149905 SAMN26348529 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916910 isolation_source patient isolate gisaid_accession EPI_ISL_10257317 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916910/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149906 SAMN26348528 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900454 isolation_source patient isolate gisaid_accession EPI_ISL_10257316 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900454/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149907 SAMN26348530 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102901271 isolation_source patient isolate gisaid_accession EPI_ISL_10257318 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102901271/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149908 SAMN26348531 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907149 isolation_source patient isolate gisaid_accession EPI_ISL_10257319 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907149/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149909 SAMN26348532 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916624 isolation_source patient isolate gisaid_accession EPI_ISL_10257320 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916624/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149910 SAMN26348534 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917003 isolation_source patient isolate gisaid_accession EPI_ISL_10257322 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917003/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149911 SAMN26348533 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102901266 isolation_source patient isolate gisaid_accession EPI_ISL_10257321 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102901266/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149912 SAMN26348535 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102901855 isolation_source patient isolate gisaid_accession EPI_ISL_10297123 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102901855/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149913 SAMN26348536 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900780 isolation_source patient isolate gisaid_accession EPI_ISL_10257323 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900780/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149914 SAMN26347881 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916043 isolation_source patient isolate gisaid_accession EPI_ISL_10256669 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916043/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149915 SAMN26348537 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102901039 isolation_source patient isolate gisaid_accession EPI_ISL_10257324 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102901039/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149916 SAMN26347882 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907888 isolation_source patient isolate gisaid_accession EPI_ISL_10256670 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907888/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149917 SAMN26347883 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916847 isolation_source patient isolate gisaid_accession EPI_ISL_10256671 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916847/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149918 SAMN26347884 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917178 isolation_source patient isolate gisaid_accession EPI_ISL_10256672 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917178/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149919 SAMN26347886 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917141 isolation_source patient isolate gisaid_accession EPI_ISL_10256674 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917141/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149920 SAMN26347885 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916812 isolation_source patient isolate gisaid_accession EPI_ISL_10256673 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916812/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149921 SAMN26347887 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916622 isolation_source patient isolate gisaid_accession EPI_ISL_10256675 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916622/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149922 SAMN26347816 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907075 isolation_source patient isolate gisaid_accession EPI_ISL_10256603 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907075/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149923 SAMN26347889 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915577 isolation_source patient isolate gisaid_accession EPI_ISL_10256678 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915577/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149924 SAMN26347888 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916148 isolation_source patient isolate gisaid_accession EPI_ISL_10256677 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916148/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149925 SAMN26347890 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916026 isolation_source patient isolate gisaid_accession EPI_ISL_10256679 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916026/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149926 SAMN26347891 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916192 isolation_source patient isolate gisaid_accession EPI_ISL_10256680 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916192/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149927 SAMN26347892 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916050 isolation_source patient isolate gisaid_accession EPI_ISL_10256681 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916050/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149928 SAMN26347893 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916052 isolation_source patient isolate gisaid_accession EPI_ISL_10256682 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916052/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149929 SAMN26347894 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-29 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916060 isolation_source patient isolate gisaid_accession EPI_ISL_10256683 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916060/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149930 SAMN26347895 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916094 isolation_source patient isolate gisaid_accession EPI_ISL_10256684 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916094/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149931 SAMN26347896 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916089 isolation_source patient isolate gisaid_accession EPI_ISL_10256685 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916089/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149932 SAMN26347897 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916035 isolation_source patient isolate gisaid_accession EPI_ISL_10256686 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916035/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149933 SAMN26347817 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907102 isolation_source patient isolate gisaid_accession EPI_ISL_10256604 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907102/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149934 SAMN26347898 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916008 isolation_source patient isolate gisaid_accession EPI_ISL_10256687 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916008/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149935 SAMN26347899 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916015 isolation_source patient isolate gisaid_accession EPI_ISL_10256688 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916015/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149936 SAMN26347900 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916717 isolation_source patient isolate gisaid_accession EPI_ISL_10256689 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916717/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149937 SAMN26347901 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907730 isolation_source patient isolate gisaid_accession EPI_ISL_10256690 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907730/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149938 SAMN26347902 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102889108 isolation_source patient isolate gisaid_accession EPI_ISL_10256691 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102889108/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149939 SAMN26347903 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906658 isolation_source patient isolate gisaid_accession EPI_ISL_10256692 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906658/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149940 SAMN26347904 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-15 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906861 isolation_source patient isolate gisaid_accession EPI_ISL_10256693 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906861/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149941 SAMN26347905 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916673 isolation_source patient isolate gisaid_accession EPI_ISL_10256694 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916673/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149942 SAMN26347906 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907147 isolation_source patient isolate gisaid_accession EPI_ISL_10256695 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907147/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149943 SAMN26347907 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907743 isolation_source patient isolate gisaid_accession EPI_ISL_10256696 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907743/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149944 SAMN26347971 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-17 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102779567 isolation_source patient isolate gisaid_accession EPI_ISL_10256759 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102779567/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149945 SAMN26347973 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916727 isolation_source patient isolate gisaid_accession EPI_ISL_10256761 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916727/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149946 SAMN26347972 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915979 isolation_source patient isolate gisaid_accession EPI_ISL_10256760 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915979/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149947 SAMN26347974 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906577 isolation_source patient isolate gisaid_accession EPI_ISL_10256762 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906577/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149948 SAMN26347975 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906522 isolation_source patient isolate gisaid_accession EPI_ISL_10256764 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906522/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149949 SAMN26347977 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907062 isolation_source patient isolate gisaid_accession EPI_ISL_10256766 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907062/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149950 SAMN26347976 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916770 isolation_source patient isolate gisaid_accession EPI_ISL_10256765 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916770/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149951 SAMN26347825 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-29 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906424 isolation_source patient isolate gisaid_accession EPI_ISL_10256612 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906424/2021 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149952 SAMN26347978 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-19 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102706088 isolation_source patient isolate gisaid_accession EPI_ISL_10256767 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102706088/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149953 SAMN26347979 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-14 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102439375 isolation_source patient isolate gisaid_accession EPI_ISL_10256768 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102439375/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149954 SAMN26347980 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906679 isolation_source patient isolate gisaid_accession EPI_ISL_10256769 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906679/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149955 SAMN26347982 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-29 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916095 isolation_source patient isolate gisaid_accession EPI_ISL_10256771 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916095/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149956 SAMN26347983 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916669 isolation_source patient isolate gisaid_accession EPI_ISL_10256772 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916669/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149957 SAMN26347981 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916036 isolation_source patient isolate gisaid_accession EPI_ISL_10256770 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916036/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149958 SAMN26347984 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907751 isolation_source patient isolate gisaid_accession EPI_ISL_10256773 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907751/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149959 SAMN26347985 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915956 isolation_source patient isolate gisaid_accession EPI_ISL_10256774 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915956/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149960 SAMN26347986 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102924054 isolation_source patient isolate gisaid_accession EPI_ISL_10256775 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102924054/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149961 SAMN26347826 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916186 isolation_source patient isolate gisaid_accession EPI_ISL_10256613 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916186/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149962 SAMN26347987 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916738 isolation_source patient isolate gisaid_accession EPI_ISL_10297121 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916738/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149963 SAMN26347989 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102924058 isolation_source patient isolate gisaid_accession EPI_ISL_10256777 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102924058/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149964 SAMN26347988 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916740 isolation_source patient isolate gisaid_accession EPI_ISL_10256776 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916740/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149965 SAMN26347990 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917154 isolation_source patient isolate gisaid_accession EPI_ISL_10256778 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917154/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149966 SAMN26347993 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-14 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102662977 isolation_source patient isolate gisaid_accession EPI_ISL_10256782 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102662977/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149967 SAMN26347992 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915759 isolation_source patient isolate gisaid_accession EPI_ISL_10256780 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915759/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149968 SAMN26347991 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915422 isolation_source patient isolate gisaid_accession EPI_ISL_10256779 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915422/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149969 SAMN26347994 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916743 isolation_source patient isolate gisaid_accession EPI_ISL_10256783 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916743/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149970 SAMN26347996 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907117 isolation_source patient isolate gisaid_accession EPI_ISL_10256785 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907117/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149971 SAMN26347995 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907752 isolation_source patient isolate gisaid_accession EPI_ISL_10256784 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907752/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149972 SAMN26347997 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917185 isolation_source patient isolate gisaid_accession EPI_ISL_10256786 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917185/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149973 SAMN26347999 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917160 isolation_source patient isolate gisaid_accession EPI_ISL_10256788 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917160/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149974 SAMN26347827 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915437 isolation_source patient isolate gisaid_accession EPI_ISL_10256614 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915437/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149975 SAMN26347998 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907116 isolation_source patient isolate gisaid_accession EPI_ISL_10256787 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907116/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149976 SAMN26348000 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907622 isolation_source patient isolate gisaid_accession EPI_ISL_10256789 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907622/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149977 SAMN26348001 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916046 isolation_source patient isolate gisaid_accession EPI_ISL_10256790 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916046/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149978 SAMN26348002 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102850588 isolation_source patient isolate gisaid_accession EPI_ISL_10256791 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102850588/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149979 SAMN26348004 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-28 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102524711 isolation_source patient isolate gisaid_accession EPI_ISL_10256793 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102524711/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149980 SAMN26348003 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907904 isolation_source patient isolate gisaid_accession EPI_ISL_10256792 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907904/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149981 SAMN26348005 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102524271 isolation_source patient isolate gisaid_accession EPI_ISL_10256794 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102524271/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149982 SAMN26348007 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916885 isolation_source patient isolate gisaid_accession EPI_ISL_10256796 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916885/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149983 SAMN26347810 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916055 isolation_source patient isolate gisaid_accession EPI_ISL_10256597 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916055/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149984 SAMN26347828 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915502 isolation_source patient isolate gisaid_accession EPI_ISL_10256615 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915502/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149985 SAMN26348006 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-26 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102889085 isolation_source patient isolate gisaid_accession EPI_ISL_10256795 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102889085/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149986 SAMN26348008 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906287 isolation_source patient isolate gisaid_accession EPI_ISL_10256797 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906287/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149987 SAMN26348009 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907636 isolation_source patient isolate gisaid_accession EPI_ISL_10256798 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907636/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149988 SAMN26348011 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102847177 isolation_source patient isolate gisaid_accession EPI_ISL_10256800 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102847177/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149989 SAMN26348010 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907784 isolation_source patient isolate gisaid_accession EPI_ISL_10256799 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907784/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149990 SAMN26348013 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916039 isolation_source patient isolate gisaid_accession EPI_ISL_10256802 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916039/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149991 SAMN26348014 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916175 isolation_source patient isolate gisaid_accession EPI_ISL_10256803 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916175/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149992 SAMN26348012 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917186 isolation_source patient isolate gisaid_accession EPI_ISL_10256801 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917186/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149993 SAMN26348016 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915541 isolation_source patient isolate gisaid_accession EPI_ISL_10256805 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915541/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149994 SAMN26348015 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917169 isolation_source patient isolate gisaid_accession EPI_ISL_10256804 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917169/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149995 SAMN26348017 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907666 isolation_source patient isolate gisaid_accession EPI_ISL_10256806 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907666/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149996 SAMN26348018 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916793 isolation_source patient isolate gisaid_accession EPI_ISL_10256807 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916793/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149997 SAMN26348019 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906261 isolation_source patient isolate gisaid_accession EPI_ISL_10256808 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906261/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149998 SAMN26347829 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915940 isolation_source patient isolate gisaid_accession EPI_ISL_10256616 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915940/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12149999 SAMN26348020 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102645382 isolation_source patient isolate gisaid_accession EPI_ISL_10256809 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102645382/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150000 SAMN26348022 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102662169 isolation_source patient isolate gisaid_accession EPI_ISL_10256811 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102662169/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150001 SAMN26348021 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916078 isolation_source patient isolate gisaid_accession EPI_ISL_10256810 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916078/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150002 SAMN26348023 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906449 isolation_source patient isolate gisaid_accession EPI_ISL_10256812 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906449/2021 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150003 SAMN26348024 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916071 isolation_source patient isolate gisaid_accession EPI_ISL_10256813 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916071/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150004 SAMN26348025 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917177 isolation_source patient isolate gisaid_accession EPI_ISL_10256814 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917177/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150005 SAMN26348026 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916917 isolation_source patient isolate gisaid_accession EPI_ISL_10256815 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916917/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150006 SAMN26348027 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907897 isolation_source patient isolate gisaid_accession EPI_ISL_10256816 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907897/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150007 SAMN26347830 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915536 isolation_source patient isolate gisaid_accession EPI_ISL_10256617 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915536/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150008 SAMN26348028 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916587 isolation_source patient isolate gisaid_accession EPI_ISL_10256817 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916587/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150009 SAMN26348029 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907740 isolation_source patient isolate gisaid_accession EPI_ISL_10256818 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907740/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150010 SAMN26348032 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907570 isolation_source patient isolate gisaid_accession EPI_ISL_10256821 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907570/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150011 SAMN26348030 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102646222 isolation_source patient isolate gisaid_accession EPI_ISL_10256819 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102646222/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150012 SAMN26348031 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907734 isolation_source patient isolate gisaid_accession EPI_ISL_10256820 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907734/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150013 SAMN26348033 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917153 isolation_source patient isolate gisaid_accession EPI_ISL_10256822 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917153/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150014 SAMN26348034 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916029 isolation_source patient isolate gisaid_accession EPI_ISL_10256823 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916029/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150015 SAMN26348458 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915401 isolation_source patient isolate gisaid_accession EPI_ISL_10257246 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915401/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150016 SAMN26348035 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102636620 isolation_source patient isolate gisaid_accession EPI_ISL_10256824 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102636620/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150017 SAMN26347873 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917022 isolation_source patient isolate gisaid_accession EPI_ISL_10256660 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917022/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150018 SAMN26348459 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916044 isolation_source patient isolate gisaid_accession EPI_ISL_10257247 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916044/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150019 SAMN26348460 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-17 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102779526 isolation_source patient isolate gisaid_accession EPI_ISL_10257248 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102779526/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150020 SAMN26348462 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907768 isolation_source patient isolate gisaid_accession EPI_ISL_10257250 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907768/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150021 SAMN26348461 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917159 isolation_source patient isolate gisaid_accession EPI_ISL_10257249 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917159/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150022 SAMN26348464 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-17 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102779522 isolation_source patient isolate gisaid_accession EPI_ISL_10257252 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102779522/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150023 SAMN26348463 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-17 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102779530 isolation_source patient isolate gisaid_accession EPI_ISL_10257251 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102779530/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150024 SAMN26348465 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-28 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102526749 isolation_source patient isolate gisaid_accession EPI_ISL_10257253 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102526749/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150025 SAMN26348467 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916822 isolation_source patient isolate gisaid_accession EPI_ISL_10257255 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916822/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150026 SAMN26348466 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-17 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102779580 isolation_source patient isolate gisaid_accession EPI_ISL_10257254 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102779580/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150027 SAMN26347874 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907052 isolation_source patient isolate gisaid_accession EPI_ISL_10256661 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907052/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150028 SAMN26348468 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907038 isolation_source patient isolate gisaid_accession EPI_ISL_10257256 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907038/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150029 SAMN26348469 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916066 isolation_source patient isolate gisaid_accession EPI_ISL_10257257 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916066/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150030 SAMN26347808 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907759 isolation_source patient isolate gisaid_accession EPI_ISL_10256595 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907759/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150031 SAMN26347809 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-12 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102924029 isolation_source patient isolate gisaid_accession EPI_ISL_10256596 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102924029/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150032 SAMN26347818 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906398 isolation_source patient isolate gisaid_accession EPI_ISL_10256605 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906398/2021 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150033 SAMN26347908 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906545 isolation_source patient isolate gisaid_accession EPI_ISL_10256697 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906545/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150034 SAMN26347910 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916898 isolation_source patient isolate gisaid_accession EPI_ISL_10256699 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916898/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150035 SAMN26347909 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915524 isolation_source patient isolate gisaid_accession EPI_ISL_10256698 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915524/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150036 SAMN26347911 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916831 isolation_source patient isolate gisaid_accession EPI_ISL_10256700 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916831/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150037 SAMN26347912 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906302 isolation_source patient isolate gisaid_accession EPI_ISL_10256701 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906302/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150038 SAMN26347914 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906524 isolation_source patient isolate gisaid_accession EPI_ISL_10256703 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906524/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150039 SAMN26347913 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906307 isolation_source patient isolate gisaid_accession EPI_ISL_10256702 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906307/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150040 SAMN26347915 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906535 isolation_source patient isolate gisaid_accession EPI_ISL_10256704 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906535/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150041 SAMN26347916 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906584 isolation_source patient isolate gisaid_accession EPI_ISL_10256705 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906584/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150042 SAMN26347819 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917145 isolation_source patient isolate gisaid_accession EPI_ISL_10256606 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917145/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150043 SAMN26347917 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906590 isolation_source patient isolate gisaid_accession EPI_ISL_10256706 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906590/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150044 SAMN26347918 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-29 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906448 isolation_source patient isolate gisaid_accession EPI_ISL_10256707 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906448/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150045 SAMN26347919 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102663246 isolation_source patient isolate gisaid_accession EPI_ISL_10256708 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102663246/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150046 SAMN26347920 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-28 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102527709 isolation_source patient isolate gisaid_accession EPI_ISL_10256709 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102527709/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150047 SAMN26347921 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102524537 isolation_source patient isolate gisaid_accession EPI_ISL_10256710 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102524537/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150048 SAMN26347922 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102523027 isolation_source patient isolate gisaid_accession EPI_ISL_10256711 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102523027/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150049 SAMN26347924 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102857240 isolation_source patient isolate gisaid_accession EPI_ISL_10256713 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102857240/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150050 SAMN26347923 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102889090 isolation_source patient isolate gisaid_accession EPI_ISL_10256712 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102889090/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150051 SAMN26347925 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907098 isolation_source patient isolate gisaid_accession EPI_ISL_10256714 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907098/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150052 SAMN26347926 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915957 isolation_source patient isolate gisaid_accession EPI_ISL_10256715 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915957/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150053 SAMN26347927 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916765 isolation_source patient isolate gisaid_accession EPI_ISL_10256716 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916765/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150054 SAMN26347928 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102924969 isolation_source patient isolate gisaid_accession EPI_ISL_10256717 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102924969/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150055 SAMN26347929 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102924951 isolation_source patient isolate gisaid_accession EPI_ISL_10256718 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102924951/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150056 SAMN26347820 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907567 isolation_source patient isolate gisaid_accession EPI_ISL_10256607 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907567/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150057 SAMN26347930 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102924949 isolation_source patient isolate gisaid_accession EPI_ISL_10256719 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102924949/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150058 SAMN26347931 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102924059 isolation_source patient isolate gisaid_accession EPI_ISL_10256720 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102924059/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150059 SAMN26347933 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102636491 isolation_source patient isolate gisaid_accession EPI_ISL_10256722 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102636491/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150060 SAMN26347932 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916734 isolation_source patient isolate gisaid_accession EPI_ISL_10256721 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916734/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150061 SAMN26347934 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102655552 isolation_source patient isolate gisaid_accession EPI_ISL_10256723 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102655552/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150062 SAMN26347936 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916645 isolation_source patient isolate gisaid_accession EPI_ISL_10256725 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916645/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150063 SAMN26347937 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916042 isolation_source patient isolate gisaid_accession EPI_ISL_10256726 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916042/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150064 SAMN26347935 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916696 isolation_source patient isolate gisaid_accession EPI_ISL_10256724 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916696/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150065 SAMN26348328 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915786 isolation_source patient isolate gisaid_accession EPI_ISL_10257116 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915786/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150066 SAMN26347821 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906637 isolation_source patient isolate gisaid_accession EPI_ISL_10256608 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906637/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150067 SAMN26348329 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916686 isolation_source patient isolate gisaid_accession EPI_ISL_10257117 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916686/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150068 SAMN26347860 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916779 isolation_source patient isolate gisaid_accession EPI_ISL_10256647 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916779/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150069 SAMN26348330 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102522076 isolation_source patient isolate gisaid_accession EPI_ISL_10257118 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102522076/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150070 SAMN26348332 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916860 isolation_source patient isolate gisaid_accession EPI_ISL_10257120 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916860/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150071 SAMN26348331 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916650 isolation_source patient isolate gisaid_accession EPI_ISL_10257119 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916650/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150072 SAMN26348333 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102921561 isolation_source patient isolate gisaid_accession EPI_ISL_10257121 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102921561/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150073 SAMN26348335 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916809 isolation_source patient isolate gisaid_accession EPI_ISL_10257123 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916809/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150074 SAMN26348334 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916905 isolation_source patient isolate gisaid_accession EPI_ISL_10257122 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916905/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150075 SAMN26348337 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102901276 isolation_source patient isolate gisaid_accession EPI_ISL_10257125 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102901276/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150076 SAMN26348336 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916032 isolation_source patient isolate gisaid_accession EPI_ISL_10257124 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916032/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150077 SAMN26347861 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906872 isolation_source patient isolate gisaid_accession EPI_ISL_10256648 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906872/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150078 SAMN26348339 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900793 isolation_source patient isolate gisaid_accession EPI_ISL_10257127 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900793/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150079 SAMN26348338 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917009 isolation_source patient isolate gisaid_accession EPI_ISL_10257126 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917009/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150080 SAMN26348342 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917164 isolation_source patient isolate gisaid_accession EPI_ISL_10257130 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917164/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150081 SAMN26348340 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-18 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102697711 isolation_source patient isolate gisaid_accession EPI_ISL_10257128 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102697711/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150082 SAMN26348343 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916056 isolation_source patient isolate gisaid_accession EPI_ISL_10257131 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916056/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150083 SAMN26348341 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916012 isolation_source patient isolate gisaid_accession EPI_ISL_10257129 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916012/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150084 SAMN26348344 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-17 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102779686 isolation_source patient isolate gisaid_accession EPI_ISL_10257132 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102779686/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150085 SAMN26348346 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-29 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906421 isolation_source patient isolate gisaid_accession EPI_ISL_10257134 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906421/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150086 SAMN26348345 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907066 isolation_source patient isolate gisaid_accession EPI_ISL_10257133 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907066/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150087 SAMN26348347 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907890 isolation_source patient isolate gisaid_accession EPI_ISL_10257135 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907890/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150088 SAMN26347862 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-19 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906902 isolation_source patient isolate gisaid_accession EPI_ISL_10256649 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906902/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150089 SAMN26348348 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907094 isolation_source patient isolate gisaid_accession EPI_ISL_10257136 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907094/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150090 SAMN26348350 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916599 isolation_source patient isolate gisaid_accession EPI_ISL_10257138 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916599/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150091 SAMN26348349 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916725 isolation_source patient isolate gisaid_accession EPI_ISL_10257137 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916725/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150092 SAMN26348353 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917198 isolation_source patient isolate gisaid_accession EPI_ISL_10257141 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917198/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150093 SAMN26348351 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900466 isolation_source patient isolate gisaid_accession EPI_ISL_10257139 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900466/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150094 SAMN26348354 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916969 isolation_source patient isolate gisaid_accession EPI_ISL_10257142 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916969/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150095 SAMN26348352 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916742 isolation_source patient isolate gisaid_accession EPI_ISL_10257140 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916742/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150096 SAMN26348355 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917140 isolation_source patient isolate gisaid_accession EPI_ISL_10257143 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917140/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150097 SAMN26348357 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-20 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102729351 isolation_source patient isolate gisaid_accession EPI_ISL_10257145 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102729351/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150098 SAMN26348356 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916213 isolation_source patient isolate gisaid_accession EPI_ISL_10257144 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916213/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150099 SAMN26347863 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906903 isolation_source patient isolate gisaid_accession EPI_ISL_10256650 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906903/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150100 SAMN26348359 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907068 isolation_source patient isolate gisaid_accession EPI_ISL_10257147 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907068/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150101 SAMN26348358 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102924057 isolation_source patient isolate gisaid_accession EPI_ISL_10257146 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102924057/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150102 SAMN26348361 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916606 isolation_source patient isolate gisaid_accession EPI_ISL_10257149 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916606/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150103 SAMN26348360 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917150 isolation_source patient isolate gisaid_accession EPI_ISL_10257148 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917150/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150104 SAMN26348362 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907851 isolation_source patient isolate gisaid_accession EPI_ISL_10257150 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907851/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150105 SAMN26348363 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907770 isolation_source patient isolate gisaid_accession EPI_ISL_10257151 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907770/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150106 SAMN26348364 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906576 isolation_source patient isolate gisaid_accession EPI_ISL_10257152 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906576/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150107 SAMN26348365 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907732 isolation_source patient isolate gisaid_accession EPI_ISL_10257153 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907732/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150108 SAMN26348367 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906509 isolation_source patient isolate gisaid_accession EPI_ISL_10257155 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906509/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150109 SAMN26348366 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916202 isolation_source patient isolate gisaid_accession EPI_ISL_10257154 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916202/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150110 SAMN26348368 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-17 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102779682 isolation_source patient isolate gisaid_accession EPI_ISL_10257156 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102779682/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150111 SAMN26347864 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906294 isolation_source patient isolate gisaid_accession EPI_ISL_10256651 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906294/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150112 SAMN26348369 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916807 isolation_source patient isolate gisaid_accession EPI_ISL_10257157 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916807/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150113 SAMN26348371 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907772 isolation_source patient isolate gisaid_accession EPI_ISL_10257159 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907772/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150114 SAMN26348370 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907898 isolation_source patient isolate gisaid_accession EPI_ISL_10257158 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907898/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150115 SAMN26348372 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915715 isolation_source patient isolate gisaid_accession EPI_ISL_10257160 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915715/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150116 SAMN26348374 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916682 isolation_source patient isolate gisaid_accession EPI_ISL_10257162 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916682/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150117 SAMN26348373 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907736 isolation_source patient isolate gisaid_accession EPI_ISL_10257161 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907736/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150118 SAMN26348375 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907765 isolation_source patient isolate gisaid_accession EPI_ISL_10257163 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907765/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150119 SAMN26348376 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915982 isolation_source patient isolate gisaid_accession EPI_ISL_10257164 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915982/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150120 SAMN26348377 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-19 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102779587 isolation_source patient isolate gisaid_accession EPI_ISL_10257165 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102779587/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150121 SAMN26347865 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907078 isolation_source patient isolate gisaid_accession EPI_ISL_10256652 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907078/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150122 SAMN26348378 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916867 isolation_source patient isolate gisaid_accession EPI_ISL_10257166 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916867/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150123 SAMN26348380 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907664 isolation_source patient isolate gisaid_accession EPI_ISL_10257168 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907664/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150124 SAMN26348379 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-29 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906454 isolation_source patient isolate gisaid_accession EPI_ISL_10257167 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906454/2021 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150125 SAMN26348381 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916162 isolation_source patient isolate gisaid_accession EPI_ISL_10257169 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916162/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150126 SAMN26348382 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-17 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102779528 isolation_source patient isolate gisaid_accession EPI_ISL_10257170 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102779528/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150127 SAMN26348384 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917181 isolation_source patient isolate gisaid_accession EPI_ISL_10257172 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917181/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150128 SAMN26348383 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916896 isolation_source patient isolate gisaid_accession EPI_ISL_10257171 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916896/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150129 SAMN26348385 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915941 isolation_source patient isolate gisaid_accession EPI_ISL_10257173 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915941/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150130 SAMN26348386 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906596 isolation_source patient isolate gisaid_accession EPI_ISL_10257174 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906596/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150131 SAMN26348387 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907139 isolation_source patient isolate gisaid_accession EPI_ISL_10257175 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907139/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150132 SAMN26347866 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907678 isolation_source patient isolate gisaid_accession EPI_ISL_10256653 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907678/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150133 SAMN26348389 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102857167 isolation_source patient isolate gisaid_accession EPI_ISL_10257177 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102857167/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150134 SAMN26348388 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900564 isolation_source patient isolate gisaid_accession EPI_ISL_10257176 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900564/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150135 SAMN26348391 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102858930 isolation_source patient isolate gisaid_accession EPI_ISL_10257179 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102858930/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150136 SAMN26348390 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916841 isolation_source patient isolate gisaid_accession EPI_ISL_10257178 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916841/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150137 SAMN26348392 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907907 isolation_source patient isolate gisaid_accession EPI_ISL_10257180 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907907/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150138 SAMN26348068 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-15 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906844 isolation_source patient isolate gisaid_accession EPI_ISL_10256857 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906844/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150139 SAMN26348069 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906413 isolation_source patient isolate gisaid_accession EPI_ISL_10256858 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906413/2021 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150140 SAMN26348071 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907887 isolation_source patient isolate gisaid_accession EPI_ISL_10256860 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907887/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150141 SAMN26348070 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-28 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102530089 isolation_source patient isolate gisaid_accession EPI_ISL_10256859 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102530089/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150142 SAMN26348072 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916149 isolation_source patient isolate gisaid_accession EPI_ISL_10256861 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916149/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150143 SAMN26348073 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915587 isolation_source patient isolate gisaid_accession EPI_ISL_10256862 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915587/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150144 SAMN26348075 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916825 isolation_source patient isolate gisaid_accession EPI_ISL_10256864 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916825/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150145 SAMN26348074 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907614 isolation_source patient isolate gisaid_accession EPI_ISL_10256863 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907614/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150146 SAMN26348076 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916756 isolation_source patient isolate gisaid_accession EPI_ISL_10256865 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916756/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150147 SAMN26348077 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102655841 isolation_source patient isolate gisaid_accession EPI_ISL_10256866 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102655841/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150148 SAMN26348078 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916159 isolation_source patient isolate gisaid_accession EPI_ISL_10256867 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916159/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150149 SAMN26347835 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916643 isolation_source patient isolate gisaid_accession EPI_ISL_10256622 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916643/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150150 SAMN26348079 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102858134 isolation_source patient isolate gisaid_accession EPI_ISL_10256868 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102858134/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150151 SAMN26348080 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916711 isolation_source patient isolate gisaid_accession EPI_ISL_10256869 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916711/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150152 SAMN26348082 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906429 isolation_source patient isolate gisaid_accession EPI_ISL_10256871 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906429/2021 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150153 SAMN26348083 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102646267 isolation_source patient isolate gisaid_accession EPI_ISL_10256872 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102646267/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150154 SAMN26348081 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915992 isolation_source patient isolate gisaid_accession EPI_ISL_10256870 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915992/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150155 SAMN26348084 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900308 isolation_source patient isolate gisaid_accession EPI_ISL_10256873 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900308/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150156 SAMN26348085 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915780 isolation_source patient isolate gisaid_accession EPI_ISL_10256874 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915780/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150157 SAMN26348087 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916205 isolation_source patient isolate gisaid_accession EPI_ISL_10256876 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916205/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150158 SAMN26348086 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916700 isolation_source patient isolate gisaid_accession EPI_ISL_10256875 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916700/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150159 SAMN26347836 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916893 isolation_source patient isolate gisaid_accession EPI_ISL_10256623 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916893/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150160 SAMN26348089 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102637004 isolation_source patient isolate gisaid_accession EPI_ISL_10256878 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102637004/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150161 SAMN26348088 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916754 isolation_source patient isolate gisaid_accession EPI_ISL_10256877 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916754/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150162 SAMN26348090 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102924055 isolation_source patient isolate gisaid_accession EPI_ISL_10256879 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102924055/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150163 SAMN26348092 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916837 isolation_source patient isolate gisaid_accession EPI_ISL_10256881 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916837/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150164 SAMN26348091 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102870513 isolation_source patient isolate gisaid_accession EPI_ISL_10256880 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102870513/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150165 SAMN26348094 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102902384 isolation_source patient isolate gisaid_accession EPI_ISL_10256883 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102902384/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150166 SAMN26348093 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916178 isolation_source patient isolate gisaid_accession EPI_ISL_10256882 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916178/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150167 SAMN26348095 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102521725 isolation_source patient isolate gisaid_accession EPI_ISL_10256884 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102521725/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150168 SAMN26348096 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102889066 isolation_source patient isolate gisaid_accession EPI_ISL_10256885 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102889066/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150169 SAMN26347837 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102853734 isolation_source patient isolate gisaid_accession EPI_ISL_10256624 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102853734/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150170 SAMN26348098 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102851962 isolation_source patient isolate gisaid_accession EPI_ISL_10256887 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102851962/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150171 SAMN26348097 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916087 isolation_source patient isolate gisaid_accession EPI_ISL_10256886 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916087/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150172 SAMN26348099 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907746 isolation_source patient isolate gisaid_accession EPI_ISL_10256888 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907746/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150173 SAMN26348100 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916082 isolation_source patient isolate gisaid_accession EPI_ISL_10256889 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916082/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150174 SAMN26348426 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-17 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102779593 isolation_source patient isolate gisaid_accession EPI_ISL_10257214 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102779593/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150175 SAMN26348425 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907578 isolation_source patient isolate gisaid_accession EPI_ISL_10257213 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907578/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150176 SAMN26348427 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916919 isolation_source patient isolate gisaid_accession EPI_ISL_10257215 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916919/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150177 SAMN26348428 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900910 isolation_source patient isolate gisaid_accession EPI_ISL_10257216 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900910/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150178 SAMN26347870 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906977 isolation_source patient isolate gisaid_accession EPI_ISL_10256657 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906977/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150179 SAMN26348429 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916683 isolation_source patient isolate gisaid_accession EPI_ISL_10257217 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916683/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150180 SAMN26348430 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916174 isolation_source patient isolate gisaid_accession EPI_ISL_10257218 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916174/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150181 SAMN26348432 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102524400 isolation_source patient isolate gisaid_accession EPI_ISL_10257220 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102524400/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150182 SAMN26348431 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916594 isolation_source patient isolate gisaid_accession EPI_ISL_10257219 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916594/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150183 SAMN26348434 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915444 isolation_source patient isolate gisaid_accession EPI_ISL_10257222 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915444/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150184 SAMN26348433 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907051 isolation_source patient isolate gisaid_accession EPI_ISL_10257221 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907051/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150185 SAMN26348435 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-28 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102528072 isolation_source patient isolate gisaid_accession EPI_ISL_10257223 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102528072/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150186 SAMN26348436 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907020 isolation_source patient isolate gisaid_accession EPI_ISL_10257224 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907020/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150187 SAMN26348437 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907760 isolation_source patient isolate gisaid_accession EPI_ISL_10257225 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907760/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150188 SAMN26347871 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-12 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102646641 isolation_source patient isolate gisaid_accession EPI_ISL_10256658 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102646641/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150189 SAMN26348439 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907908 isolation_source patient isolate gisaid_accession EPI_ISL_10257227 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907908/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150190 SAMN26348438 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907560 isolation_source patient isolate gisaid_accession EPI_ISL_10257226 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907560/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150191 SAMN26348440 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-17 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102779520 isolation_source patient isolate gisaid_accession EPI_ISL_10257228 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102779520/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150192 SAMN26348442 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-28 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102527968 isolation_source patient isolate gisaid_accession EPI_ISL_10257230 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102527968/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150193 SAMN26348441 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916931 isolation_source patient isolate gisaid_accession EPI_ISL_10257229 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916931/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150194 SAMN26348443 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-12 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102924027 isolation_source patient isolate gisaid_accession EPI_ISL_10257231 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102924027/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150195 SAMN26348444 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-29 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906484 isolation_source patient isolate gisaid_accession EPI_ISL_10257232 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906484/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150196 SAMN26348445 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916626 isolation_source patient isolate gisaid_accession EPI_ISL_10257233 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916626/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150197 SAMN26348446 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916799 isolation_source patient isolate gisaid_accession EPI_ISL_10257234 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916799/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150198 SAMN26348447 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916577 isolation_source patient isolate gisaid_accession EPI_ISL_10257235 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916577/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150199 SAMN26347872 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915409 isolation_source patient isolate gisaid_accession EPI_ISL_10256659 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915409/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150200 SAMN26348449 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907126 isolation_source patient isolate gisaid_accession EPI_ISL_10257237 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907126/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150201 SAMN26348448 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102522025 isolation_source patient isolate gisaid_accession EPI_ISL_10257236 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102522025/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150202 SAMN26348450 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-12 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102924031 isolation_source patient isolate gisaid_accession EPI_ISL_10257238 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102924031/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150203 SAMN26348451 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907926 isolation_source patient isolate gisaid_accession EPI_ISL_10257239 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907926/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150204 SAMN26348453 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906419 isolation_source patient isolate gisaid_accession EPI_ISL_10257241 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906419/2021 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150205 SAMN26348452 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102901031 isolation_source patient isolate gisaid_accession EPI_ISL_10257240 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102901031/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150206 SAMN26348454 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102858533 isolation_source patient isolate gisaid_accession EPI_ISL_10257242 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102858533/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150207 SAMN26348455 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900877 isolation_source patient isolate gisaid_accession EPI_ISL_10257243 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900877/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150208 SAMN26348456 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900650 isolation_source patient isolate gisaid_accession EPI_ISL_10257244 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900650/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150209 SAMN26348457 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915596 isolation_source patient isolate gisaid_accession EPI_ISL_10257245 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915596/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150210 SAMN26348134 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916844 isolation_source patient isolate gisaid_accession EPI_ISL_10256923 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916844/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150211 SAMN26348133 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102901258 isolation_source patient isolate gisaid_accession EPI_ISL_10256922 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102901258/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150212 SAMN26348135 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916653 isolation_source patient isolate gisaid_accession EPI_ISL_10256924 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916653/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150213 SAMN26348136 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906675 isolation_source patient isolate gisaid_accession EPI_ISL_10256925 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906675/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150214 SAMN26348137 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906896 isolation_source patient isolate gisaid_accession EPI_ISL_10256926 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906896/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150215 SAMN26348138 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907130 isolation_source patient isolate gisaid_accession EPI_ISL_10256927 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907130/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150216 SAMN26347841 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907085 isolation_source patient isolate gisaid_accession EPI_ISL_10256628 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907085/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150217 SAMN26348139 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907088 isolation_source patient isolate gisaid_accession EPI_ISL_10256928 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907088/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150218 SAMN26348140 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906536 isolation_source patient isolate gisaid_accession EPI_ISL_10256929 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906536/2021 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150219 SAMN26348141 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906407 isolation_source patient isolate gisaid_accession EPI_ISL_10256930 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906407/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150220 SAMN26348142 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102635432 isolation_source patient isolate gisaid_accession EPI_ISL_10256931 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102635432/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150221 SAMN26348143 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907839 isolation_source patient isolate gisaid_accession EPI_ISL_10256932 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907839/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150222 SAMN26348144 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-28 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102527094 isolation_source patient isolate gisaid_accession EPI_ISL_10256933 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102527094/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150223 SAMN26348145 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907749 isolation_source patient isolate gisaid_accession EPI_ISL_10256934 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907749/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150224 SAMN26348147 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907674 isolation_source patient isolate gisaid_accession EPI_ISL_10256936 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907674/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150225 SAMN26348146 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102522110 isolation_source patient isolate gisaid_accession EPI_ISL_10256935 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102522110/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150226 SAMN26347842 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907933 isolation_source patient isolate gisaid_accession EPI_ISL_10256629 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907933/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150227 SAMN26348148 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916628 isolation_source patient isolate gisaid_accession EPI_ISL_10256937 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916628/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150228 SAMN26348149 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916142 isolation_source patient isolate gisaid_accession EPI_ISL_10256938 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916142/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150229 SAMN26348151 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907831 isolation_source patient isolate gisaid_accession EPI_ISL_10256940 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907831/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150230 SAMN26348150 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906567 isolation_source patient isolate gisaid_accession EPI_ISL_10256939 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906567/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150231 SAMN26348152 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907758 isolation_source patient isolate gisaid_accession EPI_ISL_10256941 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907758/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150232 SAMN26348153 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102924063 isolation_source patient isolate gisaid_accession EPI_ISL_10256942 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102924063/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150233 SAMN26348155 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102521469 isolation_source patient isolate gisaid_accession EPI_ISL_10256944 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102521469/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150234 SAMN26348154 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916921 isolation_source patient isolate gisaid_accession EPI_ISL_10256943 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916921/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150235 SAMN26348156 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907061 isolation_source patient isolate gisaid_accession EPI_ISL_10256945 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907061/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150236 SAMN26348157 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916695 isolation_source patient isolate gisaid_accession EPI_ISL_10256946 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916695/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150237 SAMN26348158 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916769 isolation_source patient isolate gisaid_accession EPI_ISL_10256947 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916769/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150238 SAMN26347843 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906613 isolation_source patient isolate gisaid_accession EPI_ISL_10256630 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906613/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150239 SAMN26348159 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907113 isolation_source patient isolate gisaid_accession EPI_ISL_10256948 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907113/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150240 SAMN26348160 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907080 isolation_source patient isolate gisaid_accession EPI_ISL_10256949 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907080/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150241 SAMN26348162 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917157 isolation_source patient isolate gisaid_accession EPI_ISL_10256951 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917157/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150242 SAMN26348161 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916655 isolation_source patient isolate gisaid_accession EPI_ISL_10256950 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916655/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150243 SAMN26348163 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102902405 isolation_source patient isolate gisaid_accession EPI_ISL_10256952 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102902405/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150244 SAMN26348165 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916058 isolation_source patient isolate gisaid_accession EPI_ISL_10256954 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916058/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150245 SAMN26348164 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907885 isolation_source patient isolate gisaid_accession EPI_ISL_10256953 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907885/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150246 SAMN26348166 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102859258 isolation_source patient isolate gisaid_accession EPI_ISL_10256955 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102859258/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150247 SAMN26348167 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916005 isolation_source patient isolate gisaid_accession EPI_ISL_10256956 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916005/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150248 SAMN26348168 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900611 isolation_source patient isolate gisaid_accession EPI_ISL_10256957 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900611/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150249 SAMN26347844 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916574 isolation_source patient isolate gisaid_accession EPI_ISL_10256631 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916574/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150250 SAMN26348169 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-18 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102697719 isolation_source patient isolate gisaid_accession EPI_ISL_10256958 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102697719/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150251 SAMN26348170 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102522403 isolation_source patient isolate gisaid_accession EPI_ISL_10256959 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102522403/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150252 SAMN26348172 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916781 isolation_source patient isolate gisaid_accession EPI_ISL_10256961 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916781/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150253 SAMN26348171 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907755 isolation_source patient isolate gisaid_accession EPI_ISL_10256960 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907755/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150254 SAMN26348173 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916030 isolation_source patient isolate gisaid_accession EPI_ISL_10256962 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916030/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150255 SAMN26348175 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102521577 isolation_source patient isolate gisaid_accession EPI_ISL_10256964 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102521577/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150256 SAMN26348174 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102646546 isolation_source patient isolate gisaid_accession EPI_ISL_10256963 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102646546/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150257 SAMN26348176 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916708 isolation_source patient isolate gisaid_accession EPI_ISL_10256965 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916708/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150258 SAMN26348177 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906917 isolation_source patient isolate gisaid_accession EPI_ISL_10256966 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906917/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150259 SAMN26347845 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906589 isolation_source patient isolate gisaid_accession EPI_ISL_10256632 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906589/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150260 SAMN26348178 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916038 isolation_source patient isolate gisaid_accession EPI_ISL_10256967 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916038/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150261 SAMN26348180 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102880741 isolation_source patient isolate gisaid_accession EPI_ISL_10256969 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102880741/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150262 SAMN26348179 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102664765 isolation_source patient isolate gisaid_accession EPI_ISL_10256968 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102664765/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150263 SAMN26348181 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915947 isolation_source patient isolate gisaid_accession EPI_ISL_10256970 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915947/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150264 SAMN26348182 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-15 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102439196 isolation_source patient isolate gisaid_accession EPI_ISL_10256971 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102439196/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150265 SAMN26348183 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102856152 isolation_source patient isolate gisaid_accession EPI_ISL_10256972 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102856152/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150266 SAMN26348184 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916204 isolation_source patient isolate gisaid_accession EPI_ISL_10256973 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916204/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150267 SAMN26348186 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102924968 isolation_source patient isolate gisaid_accession EPI_ISL_10256975 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102924968/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150268 SAMN26348185 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907936 isolation_source patient isolate gisaid_accession EPI_ISL_10256974 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907936/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150269 SAMN26348187 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916190 isolation_source patient isolate gisaid_accession EPI_ISL_10256976 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916190/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150270 SAMN26347846 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907071 isolation_source patient isolate gisaid_accession EPI_ISL_10256633 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907071/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150271 SAMN26348189 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102858224 isolation_source patient isolate gisaid_accession EPI_ISL_10256978 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102858224/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150272 SAMN26348190 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907912 isolation_source patient isolate gisaid_accession EPI_ISL_10256979 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907912/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150273 SAMN26348188 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916591 isolation_source patient isolate gisaid_accession EPI_ISL_10256977 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916591/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150274 SAMN26348191 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102856479 isolation_source patient isolate gisaid_accession EPI_ISL_10256980 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102856479/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150275 SAMN26348193 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907668 isolation_source patient isolate gisaid_accession EPI_ISL_10256982 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907668/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150276 SAMN26348192 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917148 isolation_source patient isolate gisaid_accession EPI_ISL_10256981 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917148/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150277 SAMN26348195 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916658 isolation_source patient isolate gisaid_accession EPI_ISL_10256984 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916658/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150278 SAMN26348194 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-15 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906866 isolation_source patient isolate gisaid_accession EPI_ISL_10256983 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906866/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150279 SAMN26348196 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102664780 isolation_source patient isolate gisaid_accession EPI_ISL_10256985 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102664780/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150280 SAMN26347847 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915415 isolation_source patient isolate gisaid_accession EPI_ISL_10256634 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915415/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150281 SAMN26348197 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915658 isolation_source patient isolate gisaid_accession EPI_ISL_10256986 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915658/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150282 SAMN26348490 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907727 isolation_source patient isolate gisaid_accession EPI_ISL_10257278 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907727/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150283 SAMN26348491 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917161 isolation_source patient isolate gisaid_accession EPI_ISL_10257279 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917161/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150284 SAMN26348493 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102520334 isolation_source patient isolate gisaid_accession EPI_ISL_10257281 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102520334/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150285 SAMN26348492 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900535 isolation_source patient isolate gisaid_accession EPI_ISL_10257280 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900535/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150286 SAMN26348494 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102851373 isolation_source patient isolate gisaid_accession EPI_ISL_10257282 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102851373/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150287 SAMN26348495 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915988 isolation_source patient isolate gisaid_accession EPI_ISL_10257283 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915988/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150288 SAMN26348496 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102828018 isolation_source patient isolate gisaid_accession EPI_ISL_10257284 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102828018/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150289 SAMN26348497 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900927 isolation_source patient isolate gisaid_accession EPI_ISL_10257285 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900927/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150290 SAMN26347877 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907729 isolation_source patient isolate gisaid_accession EPI_ISL_10256664 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907729/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150291 SAMN26348498 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-29 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915996 isolation_source patient isolate gisaid_accession EPI_ISL_10257286 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915996/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150292 SAMN26348500 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900318 isolation_source patient isolate gisaid_accession EPI_ISL_10257288 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900318/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150293 SAMN26348499 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-17 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102458902 isolation_source patient isolate gisaid_accession EPI_ISL_10257287 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102458902/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150294 SAMN26348501 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916609 isolation_source patient isolate gisaid_accession EPI_ISL_10257289 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916609/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150295 SAMN26348502 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-17 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102779585 isolation_source patient isolate gisaid_accession EPI_ISL_10257290 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102779585/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150296 SAMN26348503 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102901119 isolation_source patient isolate gisaid_accession EPI_ISL_10257291 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102901119/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150297 SAMN26348504 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906598 isolation_source patient isolate gisaid_accession EPI_ISL_10257292 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906598/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150298 SAMN26348505 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916774 isolation_source patient isolate gisaid_accession EPI_ISL_10257293 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916774/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150299 SAMN26348507 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-29 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906446 isolation_source patient isolate gisaid_accession EPI_ISL_10257295 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906446/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150300 SAMN26348506 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-29 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906488 isolation_source patient isolate gisaid_accession EPI_ISL_10257294 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906488/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150301 SAMN26347815 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907058 isolation_source patient isolate gisaid_accession EPI_ISL_10256602 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907058/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150302 SAMN26347878 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907750 isolation_source patient isolate gisaid_accession EPI_ISL_10256665 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907750/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150303 SAMN26348508 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906908 isolation_source patient isolate gisaid_accession EPI_ISL_10257296 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906908/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150304 SAMN26348510 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916074 isolation_source patient isolate gisaid_accession EPI_ISL_10257298 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916074/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150305 SAMN26348509 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916906 isolation_source patient isolate gisaid_accession EPI_ISL_10257297 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916906/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150306 SAMN26348512 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-17 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102779732 isolation_source patient isolate gisaid_accession EPI_ISL_10257300 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102779732/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150307 SAMN26348511 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900732 isolation_source patient isolate gisaid_accession EPI_ISL_10257299 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900732/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150308 SAMN26348514 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907616 isolation_source patient isolate gisaid_accession EPI_ISL_10257302 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907616/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150309 SAMN26348513 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907028 isolation_source patient isolate gisaid_accession EPI_ISL_10257301 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907028/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150310 SAMN26348515 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916006 isolation_source patient isolate gisaid_accession EPI_ISL_10257303 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916006/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150311 SAMN26348517 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900313 isolation_source patient isolate gisaid_accession EPI_ISL_10257305 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900313/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150312 SAMN26348516 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907795 isolation_source patient isolate gisaid_accession EPI_ISL_10257304 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907795/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150313 SAMN26347879 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907884 isolation_source patient isolate gisaid_accession EPI_ISL_10256666 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907884/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150314 SAMN26348518 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102901875 isolation_source patient isolate gisaid_accession EPI_ISL_10257306 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102901875/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150315 SAMN26348519 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916994 isolation_source patient isolate gisaid_accession EPI_ISL_10257307 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916994/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150316 SAMN26348520 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916040 isolation_source patient isolate gisaid_accession EPI_ISL_10257308 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916040/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150317 SAMN26348263 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916185 isolation_source patient isolate gisaid_accession EPI_ISL_10257052 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916185/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150318 SAMN26348521 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900572 isolation_source patient isolate gisaid_accession EPI_ISL_10257309 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900572/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150319 SAMN26348264 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-20 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102718530 isolation_source patient isolate gisaid_accession EPI_ISL_10257053 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102718530/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150320 SAMN26348265 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916069 isolation_source patient isolate gisaid_accession EPI_ISL_10257054 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916069/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150321 SAMN26348266 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102522326 isolation_source patient isolate gisaid_accession EPI_ISL_10257055 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102522326/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150322 SAMN26347854 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-16 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906823 isolation_source patient isolate gisaid_accession EPI_ISL_10256641 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906823/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150323 SAMN26348267 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906611 isolation_source patient isolate gisaid_accession EPI_ISL_10257056 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906611/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150324 SAMN26348269 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906388 isolation_source patient isolate gisaid_accession EPI_ISL_10257058 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906388/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150325 SAMN26348268 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102655843 isolation_source patient isolate gisaid_accession EPI_ISL_10257057 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102655843/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150326 SAMN26348271 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916189 isolation_source patient isolate gisaid_accession EPI_ISL_10257060 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916189/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150327 SAMN26348270 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-26 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102889080 isolation_source patient isolate gisaid_accession EPI_ISL_10257059 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102889080/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150328 SAMN26348272 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916598 isolation_source patient isolate gisaid_accession EPI_ISL_10257061 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916598/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150329 SAMN26348273 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916805 isolation_source patient isolate gisaid_accession EPI_ISL_10257062 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916805/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150330 SAMN26348275 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916900 isolation_source patient isolate gisaid_accession EPI_ISL_10257064 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916900/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150331 SAMN26348274 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102656040 isolation_source patient isolate gisaid_accession EPI_ISL_10257063 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102656040/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150332 SAMN26348276 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916775 isolation_source patient isolate gisaid_accession EPI_ISL_10257065 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916775/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150333 SAMN26348277 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906530 isolation_source patient isolate gisaid_accession EPI_ISL_10257066 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906530/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150334 SAMN26347855 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102827408 isolation_source patient isolate gisaid_accession EPI_ISL_10256642 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102827408/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150335 SAMN26348278 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102522989 isolation_source patient isolate gisaid_accession EPI_ISL_10257067 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102522989/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150336 SAMN26348279 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916764 isolation_source patient isolate gisaid_accession EPI_ISL_10257068 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916764/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150337 SAMN26348280 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102889018 isolation_source patient isolate gisaid_accession EPI_ISL_10257069 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102889018/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150338 SAMN26348282 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907879 isolation_source patient isolate gisaid_accession EPI_ISL_10257071 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907879/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150339 SAMN26348281 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-29 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916084 isolation_source patient isolate gisaid_accession EPI_ISL_10257070 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916084/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150340 SAMN26348283 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907781 isolation_source patient isolate gisaid_accession EPI_ISL_10257072 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907781/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150341 SAMN26348284 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915570 isolation_source patient isolate gisaid_accession EPI_ISL_10257073 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915570/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150342 SAMN26348285 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916853 isolation_source patient isolate gisaid_accession EPI_ISL_10257074 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916853/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150343 SAMN26348287 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906434 isolation_source patient isolate gisaid_accession EPI_ISL_10257076 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906434/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150344 SAMN26348286 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916183 isolation_source patient isolate gisaid_accession EPI_ISL_10257075 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916183/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150345 SAMN26347856 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102915452 isolation_source patient isolate gisaid_accession EPI_ISL_10256643 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102915452/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150346 SAMN26348289 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906868 isolation_source patient isolate gisaid_accession EPI_ISL_10257078 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906868/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150347 SAMN26348288 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102889067 isolation_source patient isolate gisaid_accession EPI_ISL_10257077 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102889067/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150348 SAMN26348292 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102524167 isolation_source patient isolate gisaid_accession EPI_ISL_10257081 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102524167/2021 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150349 SAMN26348290 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916745 isolation_source patient isolate gisaid_accession EPI_ISL_10257079 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916745/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150350 SAMN26348291 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907745 isolation_source patient isolate gisaid_accession EPI_ISL_10257080 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907745/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150351 SAMN26348293 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916815 isolation_source patient isolate gisaid_accession EPI_ISL_10257082 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916815/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150352 SAMN26348294 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916656 isolation_source patient isolate gisaid_accession EPI_ISL_10257083 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916656/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150353 SAMN26348296 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916737 isolation_source patient isolate gisaid_accession EPI_ISL_10257085 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916737/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150354 SAMN26348295 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102917007 isolation_source patient isolate gisaid_accession EPI_ISL_10257084 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102917007/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150355 SAMN26348297 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916048 isolation_source patient isolate gisaid_accession EPI_ISL_10257086 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916048/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150356 SAMN26347857 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916214 isolation_source patient isolate gisaid_accession EPI_ISL_10256644 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916214/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150357 SAMN26348299 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916767 isolation_source patient isolate gisaid_accession EPI_ISL_10257088 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916767/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150358 SAMN26348300 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906499 isolation_source patient isolate gisaid_accession EPI_ISL_10257089 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906499/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150359 SAMN26348298 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916772 isolation_source patient isolate gisaid_accession EPI_ISL_10257087 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916772/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150360 SAMN26348301 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102906493 isolation_source patient isolate gisaid_accession EPI_ISL_10257090 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102906493/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150361 SAMN26348302 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916796 isolation_source patient isolate gisaid_accession EPI_ISL_10257091 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916796/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150362 SAMN26348303 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-28 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102900598 isolation_source patient isolate gisaid_accession EPI_ISL_10257092 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102900598/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150363 SAMN26348305 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907671 isolation_source patient isolate gisaid_accession EPI_ISL_10257094 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907671/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150364 SAMN26348304 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102916808 isolation_source patient isolate gisaid_accession EPI_ISL_10257093 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102916808/2022 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS12150365 SAMN26348306 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe accute respiratory syndrome isolate CO-CDPHE-2102907152 isolation_source patient isolate gisaid_accession EPI_ISL_10257095 gisaid_virus_name hCoV-19/USA/CO-CDPHE-2102907152/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated