SRX15003346 SM-3VHYX SRP262312 phs001473 Libraries were generated following standard Broad protocols and pooled prior to hybridization. Hybridization and capture were performed. All library construction, hybridization, and capture steps were automated on a liquid handling system. SRS12752250 MDAC-0008-N-08 SM-3VHYX WXS GENOMIC Hybrid Selection Illumina HiSeq 2500 alignment_software bwamem_0.7.15-r1140 SRX15003347 SM-3VIE2 SRP262312 phs001473 Libraries were generated following standard Broad protocols and pooled prior to hybridization. Hybridization and capture were performed. All library construction, hybridization, and capture steps were automated on a liquid handling system. SRS12292549 MDAC-0008-T-01 SM-3VIE2 WXS GENOMIC Hybrid Selection Illumina HiSeq 2500 alignment_software bwamem_0.7.15-r1140 SRX15003348 SM-3VIED SRP262312 phs001473 Libraries were generated following standard Broad protocols and pooled prior to hybridization. Hybridization and capture were performed. All library construction, hybridization, and capture steps were automated on a liquid handling system. SRS12292551 MDAC-0012-T-01 SM-3VIED WXS GENOMIC Hybrid Selection Illumina HiSeq 2500 alignment_software bwamem_0.7.15-r1140 SRX15003349 SM-4B1VK SRP262312 phs001473 Libraries were generated following standard Broad protocols and pooled prior to hybridization. Hybridization and capture were performed. All library construction, hybridization, and capture steps were automated on a liquid handling system. SRS6686199 NHLBI-0015-T-01 SM-4B1VK WXS GENOMIC Hybrid Selection Illumina HiSeq 2500 alignment_software bwamem_0.7.15-r1140 SRX15003350 SM-4B1VQ SRP262312 phs001473 Libraries were generated following standard Broad protocols and pooled prior to hybridization. Hybridization and capture were performed. All library construction, hybridization, and capture steps were automated on a liquid handling system. SRS6686218 NHLBI-0017-T-01 SM-4B1VQ WXS GENOMIC Hybrid Selection Illumina HiSeq 2500 alignment_software bwamem_0.7.15-r1140 SRX15003351 SM-4B1WC SRP262312 phs001473 Libraries were generated following standard Broad protocols and pooled prior to hybridization. Hybridization and capture were performed. All library construction, hybridization, and capture steps were automated on a liquid handling system. SRS6689270 NHLBI-0024-T-01 SM-4B1WC WXS GENOMIC Hybrid Selection Illumina HiSeq 2500 alignment_software bwamem_0.7.15-r1140 SRX15003352 SM-4AZRL SRP262312 phs001473 Libraries were generated following standard Broad protocols and pooled prior to hybridization. Hybridization and capture were performed. All library construction, hybridization, and capture steps were automated on a liquid handling system. SRS6686197 NHLBI-0030-T-01 SM-4AZRL WXS GENOMIC Hybrid Selection Illumina HiSeq 2500 alignment_software bwamem_0.7.15-r1140 SRX15003353 SM-585YW SRP262312 phs001473 Libraries were generated following standard Broad protocols and pooled prior to hybridization. Hybridization and capture were performed. All library construction, hybridization, and capture steps were automated on a liquid handling system. SRS12752251 NHLBI-0050-L-01 SM-585YW WXS GENOMIC Hybrid Selection Illumina HiSeq 2500 alignment_software bwamem_0.7.15-r1140 SRX15003354 SM-4RTXS SRP262312 phs001473 Libraries were generated following standard Broad protocols and pooled prior to hybridization. Hybridization and capture were performed. All library construction, hybridization, and capture steps were automated on a liquid handling system. SRS12752252 NHLBI-0050-N-01 SM-4RTXS WXS GENOMIC Hybrid Selection Illumina HiSeq 2500 alignment_software bwamem_0.7.15-r1140 SRX15003355 SM-4MCWC SRP262312 phs001473 Libraries were generated following standard Broad protocols and pooled prior to hybridization. Hybridization and capture were performed. All library construction, hybridization, and capture steps were automated on a liquid handling system. SRS6686119 NHLBI-0051-T-01 SM-4MCWC WXS GENOMIC Hybrid Selection Illumina HiSeq 2500 alignment_software bwamem_0.7.15-r1140 SRX15003356 SM-49IOL SRP262312 phs001473 Libraries were generated from total RNA using an automated variant of the Illumina TruSeq™ Stranded mRNA Sample Preparation Kit. This was followed by heat fragmentation and cDNA synthesis from the RNA template. The resultant cDNA went through library preparation (end repair, base 'A' addition, adapter ligation, and enrichment) using Broad designed indexed adapters substituted in for multiplexing. After enrichment the libraries were quantified and then pooled equimolarly. All library construction steps were automated on a liquid handling system. SRS12752253 NHLBI-0052-T-01 SM-49IOL RNA-Seq TRANSCRIPTOMIC PolyA Illumina HiSeq 2000 alignment_software STAR_2.6.1d SRX15003357 SM-49IOM SRP262312 phs001473 Libraries were generated from total RNA using an automated variant of the Illumina TruSeq™ Stranded mRNA Sample Preparation Kit. This was followed by heat fragmentation and cDNA synthesis from the RNA template. The resultant cDNA went through library preparation (end repair, base 'A' addition, adapter ligation, and enrichment) using Broad designed indexed adapters substituted in for multiplexing. After enrichment the libraries were quantified and then pooled equimolarly. All library construction steps were automated on a liquid handling system. SRS12752254 NHLBI-0053-T-01 SM-49IOM RNA-Seq TRANSCRIPTOMIC PolyA Illumina HiSeq 2000 alignment_software STAR_2.6.1d