SRS12866467 SAMN28053939 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040160 strain SARS-CoV-2 isolate K040160 collected_by National Health Laboratory Service collection_date 2022-04-16 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866468 SAMN28054386 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039887 strain SARS-CoV-2 isolate K039887 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866469 SAMN28053940 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040161 strain SARS-CoV-2 isolate K040161 collected_by National Health Laboratory Service collection_date 2022-04-16 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866470 SAMN28053941 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040162 strain SARS-CoV-2 isolate K040162 collected_by National Health Laboratory Service collection_date 2022-04-14 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866471 SAMN28053943 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040164 strain SARS-CoV-2 isolate K040164 collected_by National Health Laboratory Service collection_date 2022-04-18 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866472 SAMN28053944 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040165 strain SARS-CoV-2 isolate K040165 collected_by National Health Laboratory Service collection_date 2022-04-16 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866473 SAMN28053945 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040166 strain SARS-CoV-2 isolate K040166 collected_by National Health Laboratory Service collection_date 2022-04-14 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866474 SAMN28053947 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040168 strain SARS-CoV-2 isolate K040168 collected_by National Health Laboratory Service collection_date 2022-04-18 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866475 SAMN28053948 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040169 strain SARS-CoV-2 isolate K040169 collected_by National Health Laboratory Service collection_date 2022-04-16 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866476 SAMN28053949 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040170 strain SARS-CoV-2 isolate K040170 collected_by National Health Laboratory Service collection_date 2022-04-14 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866477 SAMN28053951 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040172 strain SARS-CoV-2 isolate K040172 collected_by National Health Laboratory Service collection_date 2022-04-15 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866478 SAMN28053952 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040173 strain SARS-CoV-2 isolate K040173 collected_by National Health Laboratory Service collection_date 2022-04-14 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866479 SAMN28054369 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039870 strain SARS-CoV-2 isolate K039870 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866480 SAMN28054388 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039889 strain SARS-CoV-2 isolate K039889 collected_by National Health Laboratory Service collection_date 2022-04-09 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866481 SAMN28053955 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040176 strain SARS-CoV-2 isolate K040176 collected_by National Health Laboratory Service collection_date 2022-04-13 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866482 SAMN28053956 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040177 strain SARS-CoV-2 isolate K040177 collected_by National Health Laboratory Service collection_date 2022-04-16 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866483 SAMN28053959 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040180 strain SARS-CoV-2 isolate K040180 collected_by National Health Laboratory Service collection_date 2022-04-15 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866484 SAMN28053960 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040181 strain SARS-CoV-2 isolate K040181 collected_by National Health Laboratory Service collection_date 2022-04-14 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866485 SAMN28054553 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040198 strain SARS-CoV-2 isolate K040198 collected_by National Health Laboratory Service collection_date 2022-04-22 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866486 SAMN28054554 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040199 strain SARS-CoV-2 isolate K040199 collected_by National Health Laboratory Service collection_date 2022-04-22 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866487 SAMN28054555 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040200 strain SARS-CoV-2 isolate K040200 collected_by National Health Laboratory Service collection_date 2022-04-22 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866488 SAMN28054556 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040201 strain SARS-CoV-2 isolate K040201 collected_by National Health Laboratory Service collection_date 2022-04-23 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866489 SAMN28054557 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040202 strain SARS-CoV-2 isolate K040202 collected_by National Health Laboratory Service collection_date 2022-04-22 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866490 SAMN28054558 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040203 strain SARS-CoV-2 isolate K040203 collected_by National Health Laboratory Service collection_date 2022-04-22 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866491 SAMN28054389 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039890 strain SARS-CoV-2 isolate K039890 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866492 SAMN28054559 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040204 strain SARS-CoV-2 isolate K040204 collected_by National Health Laboratory Service collection_date 2022-04-22 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866493 SAMN28054560 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040205 strain SARS-CoV-2 isolate K040205 collected_by National Health Laboratory Service collection_date 2022-04-21 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866494 SAMN28054561 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040206 strain SARS-CoV-2 isolate K040206 collected_by National Health Laboratory Service collection_date 2022-04-22 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866495 SAMN28054367 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039868 strain SARS-CoV-2 isolate K039868 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866496 SAMN28054368 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039869 strain SARS-CoV-2 isolate K039869 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866497 SAMN28054377 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039878 strain SARS-CoV-2 isolate K039878 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866498 SAMN28054492 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039993 strain SARS-CoV-2 isolate K039993 collected_by National Health Laboratory Service collection_date 2022-04-13 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866499 SAMN28054493 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039994 strain SARS-CoV-2 isolate K039994 collected_by National Health Laboratory Service collection_date 2022-04-13 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866500 SAMN28054494 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039995 strain SARS-CoV-2 isolate K039995 collected_by National Health Laboratory Service collection_date 2022-04-13 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866501 SAMN28054495 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039996 strain SARS-CoV-2 isolate K039996 collected_by National Health Laboratory Service collection_date 2022-04-14 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866502 SAMN28054496 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039997 strain SARS-CoV-2 isolate K039997 collected_by National Health Laboratory Service collection_date 2022-04-14 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866503 SAMN28054497 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039998 strain SARS-CoV-2 isolate K039998 collected_by National Health Laboratory Service collection_date 2022-04-15 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866504 SAMN28054498 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039999 strain SARS-CoV-2 isolate K039999 collected_by National Health Laboratory Service collection_date 2022-04-15 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866505 SAMN28054499 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040000 strain SARS-CoV-2 isolate K040000 collected_by National Health Laboratory Service collection_date 2022-04-15 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866506 SAMN28054380 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039881 strain SARS-CoV-2 isolate K039881 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866507 SAMN28054500 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040001 strain SARS-CoV-2 isolate K040001 collected_by National Health Laboratory Service collection_date 2022-04-15 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866508 SAMN28054501 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040002 strain SARS-CoV-2 isolate K040002 collected_by National Health Laboratory Service collection_date 2022-04-13 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866509 SAMN28054502 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040003 strain SARS-CoV-2 isolate K040003 collected_by National Health Laboratory Service collection_date 2022-04-17 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866510 SAMN28054503 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040004 strain SARS-CoV-2 isolate K040004 collected_by National Health Laboratory Service collection_date 2022-04-19 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866511 SAMN28054504 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040005 strain SARS-CoV-2 isolate K040005 collected_by National Health Laboratory Service collection_date 2022-04-18 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866512 SAMN28054505 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040006 strain SARS-CoV-2 isolate K040006 collected_by Africa Health Research Institute collection_date 2022-03-29 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866513 SAMN28054506 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040007 strain SARS-CoV-2 isolate K040007 collected_by Africa Health Research Institute collection_date 2022-03-31 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866514 SAMN28054507 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040008 strain SARS-CoV-2 isolate K040008 collected_by Africa Health Research Institute collection_date 2022-03-31 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866515 SAMN28054508 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040009 strain SARS-CoV-2 isolate K040009 collected_by Africa Health Research Institute collection_date 2022-03-24 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866516 SAMN28054509 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040010 strain SARS-CoV-2 isolate K040010 collected_by Africa Health Research Institute collection_date 2022-04-05 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866517 SAMN28054381 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039882 strain SARS-CoV-2 isolate K039882 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866518 SAMN28054510 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040011 strain SARS-CoV-2 isolate K040011 collected_by Africa Health Research Institute collection_date 2022-04-07 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866519 SAMN28054511 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040012 strain SARS-CoV-2 isolate K040012 collected_by Africa Health Research Institute collection_date 2022-04-08 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866520 SAMN28054512 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040013 strain SARS-CoV-2 isolate K040013 collected_by Africa Health Research Institute collection_date missing geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866521 SAMN28054513 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040014 strain SARS-CoV-2 isolate K040014 collected_by Africa Health Research Institute collection_date missing geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866522 SAMN28054470 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039971 strain SARS-CoV-2 isolate K039971 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866523 SAMN28054471 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039972 strain SARS-CoV-2 isolate K039972 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866524 SAMN28054472 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039973 strain SARS-CoV-2 isolate K039973 collected_by National Health Laboratory Service collection_date 2022-04-09 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866525 SAMN28054473 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039974 strain SARS-CoV-2 isolate K039974 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866526 SAMN28054474 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039975 strain SARS-CoV-2 isolate K039975 collected_by National Health Laboratory Service collection_date 2022-04-09 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866527 SAMN28054475 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039976 strain SARS-CoV-2 isolate K039976 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866528 SAMN28054476 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039977 strain SARS-CoV-2 isolate K039977 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866529 SAMN28054477 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039978 strain SARS-CoV-2 isolate K039978 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866530 SAMN28054478 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039979 strain SARS-CoV-2 isolate K039979 collected_by National Health Laboratory Service collection_date 2022-04-09 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866531 SAMN28054479 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039980 strain SARS-CoV-2 isolate K039980 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866532 SAMN28054378 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039879 strain SARS-CoV-2 isolate K039879 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866533 SAMN28054480 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039981 strain SARS-CoV-2 isolate K039981 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866534 SAMN28054481 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039982 strain SARS-CoV-2 isolate K039982 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866535 SAMN28054482 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039983 strain SARS-CoV-2 isolate K039983 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866536 SAMN28054483 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039984 strain SARS-CoV-2 isolate K039984 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866537 SAMN28054484 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039985 strain SARS-CoV-2 isolate K039985 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866538 SAMN28054485 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039986 strain SARS-CoV-2 isolate K039986 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866539 SAMN28054486 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039987 strain SARS-CoV-2 isolate K039987 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866540 SAMN28054487 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039988 strain SARS-CoV-2 isolate K039988 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866541 SAMN28054488 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039989 strain SARS-CoV-2 isolate K039989 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866542 SAMN28054489 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039990 strain SARS-CoV-2 isolate K039990 collected_by National Health Laboratory Service collection_date 2022-04-13 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866543 SAMN28054379 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039880 strain SARS-CoV-2 isolate K039880 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866544 SAMN28054490 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039991 strain SARS-CoV-2 isolate K039991 collected_by National Health Laboratory Service collection_date 2022-04-13 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866545 SAMN28054491 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039992 strain SARS-CoV-2 isolate K039992 collected_by National Health Laboratory Service collection_date 2022-04-13 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866546 SAMN28054588 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040233 strain SARS-CoV-2 isolate K040233 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866547 SAMN28054392 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039893 strain SARS-CoV-2 isolate K039893 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866548 SAMN28054589 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040234 strain SARS-CoV-2 isolate K040234 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866549 SAMN28054590 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040235 strain SARS-CoV-2 isolate K040235 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866550 SAMN28054591 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040236 strain SARS-CoV-2 isolate K040236 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866551 SAMN28054592 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040237 strain SARS-CoV-2 isolate K040237 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866552 SAMN28054593 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040238 strain SARS-CoV-2 isolate K040238 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866553 SAMN28054594 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040239 strain SARS-CoV-2 isolate K040239 collected_by National Health Laboratory Service collection_date 2022-04-21 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866554 SAMN28054595 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040240 strain SARS-CoV-2 isolate K040240 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866555 SAMN28054596 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040241 strain SARS-CoV-2 isolate K040241 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866556 SAMN28054597 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040242 strain SARS-CoV-2 isolate K040242 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866557 SAMN28054598 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040243 strain SARS-CoV-2 isolate K040243 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866558 SAMN28054393 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039894 strain SARS-CoV-2 isolate K039894 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866559 SAMN28054599 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040244 strain SARS-CoV-2 isolate K040244 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866560 SAMN28054600 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040245 strain SARS-CoV-2 isolate K040245 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866561 SAMN28054601 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040246 strain SARS-CoV-2 isolate K040246 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866562 SAMN28054602 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040247 strain SARS-CoV-2 isolate K040247 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866563 SAMN28054603 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040248 strain SARS-CoV-2 isolate K040248 collected_by missing collection_date 2022-04-22 geo_loc_name missing host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866564 SAMN28054394 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039895 strain SARS-CoV-2 isolate K039895 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866565 SAMN28054395 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039896 strain SARS-CoV-2 isolate K039896 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866566 SAMN28054396 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039897 strain SARS-CoV-2 isolate K039897 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866567 SAMN28054397 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039898 strain SARS-CoV-2 isolate K039898 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866568 SAMN28054370 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039871 strain SARS-CoV-2 isolate K039871 collected_by National Health Laboratory Service collection_date 2022-04-09 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866569 SAMN28054398 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039899 strain SARS-CoV-2 isolate K039899 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866570 SAMN28054399 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039900 strain SARS-CoV-2 isolate K039900 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866571 SAMN28054400 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039901 strain SARS-CoV-2 isolate K039901 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866572 SAMN28054401 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039902 strain SARS-CoV-2 isolate K039902 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866573 SAMN28054425 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039926 strain SARS-CoV-2 isolate K039926 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866574 SAMN28054426 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039927 strain SARS-CoV-2 isolate K039927 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866575 SAMN28054428 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039929 strain SARS-CoV-2 isolate K039929 collected_by National Health Laboratory Service collection_date 2022-04-09 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866576 SAMN28054429 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039930 strain SARS-CoV-2 isolate K039930 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866577 SAMN28054373 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039874 strain SARS-CoV-2 isolate K039874 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866578 SAMN28054430 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039931 strain SARS-CoV-2 isolate K039931 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866579 SAMN28054431 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039932 strain SARS-CoV-2 isolate K039932 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866580 SAMN28054432 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039933 strain SARS-CoV-2 isolate K039933 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866581 SAMN28054433 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039934 strain SARS-CoV-2 isolate K039934 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866582 SAMN28054434 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039935 strain SARS-CoV-2 isolate K039935 collected_by National Health Laboratory Service collection_date 2022-04-09 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866583 SAMN28054435 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039936 strain SARS-CoV-2 isolate K039936 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866584 SAMN28054436 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039937 strain SARS-CoV-2 isolate K039937 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866585 SAMN28054437 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039938 strain SARS-CoV-2 isolate K039938 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866586 SAMN28054438 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039939 strain SARS-CoV-2 isolate K039939 collected_by National Health Laboratory Service collection_date 2022-04-09 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866587 SAMN28054439 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039940 strain SARS-CoV-2 isolate K039940 collected_by National Health Laboratory Service collection_date 2022-04-09 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866588 SAMN28054374 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039875 strain SARS-CoV-2 isolate K039875 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866589 SAMN28054440 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039941 strain SARS-CoV-2 isolate K039941 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866590 SAMN28054441 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039942 strain SARS-CoV-2 isolate K039942 collected_by National Health Laboratory Service collection_date 2022-04-09 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866591 SAMN28054442 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039943 strain SARS-CoV-2 isolate K039943 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866592 SAMN28054443 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039944 strain SARS-CoV-2 isolate K039944 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866593 SAMN28054444 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039945 strain SARS-CoV-2 isolate K039945 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866594 SAMN28054445 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039946 strain SARS-CoV-2 isolate K039946 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866595 SAMN28054446 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039947 strain SARS-CoV-2 isolate K039947 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866596 SAMN28054447 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039948 strain SARS-CoV-2 isolate K039948 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866597 SAMN28054514 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040015 strain SARS-CoV-2 isolate K040015 collected_by Africa Health Research Institute collection_date missing geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866598 SAMN28054515 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040016 strain SARS-CoV-2 isolate K040016 collected_by National Health Laboratory Service collection_date 2022-04-06 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866599 SAMN28054516 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040017 strain SARS-CoV-2 isolate K040017 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866600 SAMN28054517 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040018 strain SARS-CoV-2 isolate K040018 collected_by National Health Laboratory Service collection_date 2022-04-09 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866601 SAMN28054518 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040019 strain SARS-CoV-2 isolate K040019 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866602 SAMN28054519 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040020 strain SARS-CoV-2 isolate K040020 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866603 SAMN28054382 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039883 strain SARS-CoV-2 isolate K039883 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866604 SAMN28054520 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040021 strain SARS-CoV-2 isolate K040021 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866605 SAMN28054521 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040022 strain SARS-CoV-2 isolate K040022 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866606 SAMN28054522 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040023 strain SARS-CoV-2 isolate K040023 collected_by National Health Laboratory Service collection_date 2022-04-06 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866607 SAMN28054523 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040024 strain SARS-CoV-2 isolate K040024 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866608 SAMN28054524 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040025 strain SARS-CoV-2 isolate K040025 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866609 SAMN28054525 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040026 strain SARS-CoV-2 isolate K040026 collected_by National Health Laboratory Service collection_date 2022-04-07 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866610 SAMN28054526 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040027 strain SARS-CoV-2 isolate K040027 collected_by National Health Laboratory Service collection_date 2022-04-07 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866611 SAMN28054527 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040028 strain SARS-CoV-2 isolate K040028 collected_by National Health Laboratory Service collection_date 2022-04-06 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866612 SAMN28054528 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040029 strain SARS-CoV-2 isolate K040029 collected_by National Health Laboratory Service collection_date 2022-04-06 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866613 SAMN28054529 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040030 strain SARS-CoV-2 isolate K040030 collected_by National Health Laboratory Service collection_date 2022-04-06 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866614 SAMN28054383 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039884 strain SARS-CoV-2 isolate K039884 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866615 SAMN28054530 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040031 strain SARS-CoV-2 isolate K040031 collected_by National Health Laboratory Service collection_date 2022-04-06 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866616 SAMN28054532 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040033 strain SARS-CoV-2 isolate K040033 collected_by National Health Laboratory Service collection_date 2022-04-06 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866617 SAMN28054533 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040034 strain SARS-CoV-2 isolate K040034 collected_by National Health Laboratory Service collection_date 2022-04-06 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866618 SAMN28054534 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040035 strain SARS-CoV-2 isolate K040035 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866619 SAMN28054535 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040036 strain SARS-CoV-2 isolate K040036 collected_by National Health Laboratory Service collection_date 2022-04-07 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866620 SAMN28054531 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040032 strain SARS-CoV-2 isolate K040032 collected_by National Health Laboratory Service collection_date 2022-04-07 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866621 SAMN28054448 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039949 strain SARS-CoV-2 isolate K039949 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866622 SAMN28054449 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039950 strain SARS-CoV-2 isolate K039950 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866623 SAMN28054375 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039876 strain SARS-CoV-2 isolate K039876 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866624 SAMN28054450 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039951 strain SARS-CoV-2 isolate K039951 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866625 SAMN28054451 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039952 strain SARS-CoV-2 isolate K039952 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866626 SAMN28054452 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039953 strain SARS-CoV-2 isolate K039953 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866627 SAMN28054453 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039954 strain SARS-CoV-2 isolate K039954 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866628 SAMN28054454 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039955 strain SARS-CoV-2 isolate K039955 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866629 SAMN28054455 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039956 strain SARS-CoV-2 isolate K039956 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866630 SAMN28054456 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039957 strain SARS-CoV-2 isolate K039957 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866631 SAMN28054457 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039958 strain SARS-CoV-2 isolate K039958 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866632 SAMN28054458 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039959 strain SARS-CoV-2 isolate K039959 collected_by National Health Laboratory Service collection_date 2022-04-09 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866633 SAMN28054459 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039960 strain SARS-CoV-2 isolate K039960 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866634 SAMN28054376 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039877 strain SARS-CoV-2 isolate K039877 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866635 SAMN28054460 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039961 strain SARS-CoV-2 isolate K039961 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866636 SAMN28054461 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039962 strain SARS-CoV-2 isolate K039962 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866637 SAMN28054462 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039963 strain SARS-CoV-2 isolate K039963 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866638 SAMN28054463 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039964 strain SARS-CoV-2 isolate K039964 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866639 SAMN28054464 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039965 strain SARS-CoV-2 isolate K039965 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866640 SAMN28054465 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039966 strain SARS-CoV-2 isolate K039966 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866641 SAMN28054466 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039967 strain SARS-CoV-2 isolate K039967 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866642 SAMN28054467 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039968 strain SARS-CoV-2 isolate K039968 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866643 SAMN28054468 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039969 strain SARS-CoV-2 isolate K039969 collected_by National Health Laboratory Service collection_date 2022-04-09 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866644 SAMN28054469 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039970 strain SARS-CoV-2 isolate K039970 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866645 SAMN28054536 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040037 strain SARS-CoV-2 isolate K040037 collected_by National Health Laboratory Service collection_date 2022-04-06 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866646 SAMN28054537 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040038 strain SARS-CoV-2 isolate K040038 collected_by National Health Laboratory Service collection_date 2022-04-07 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866647 SAMN28054538 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040039 strain SARS-CoV-2 isolate K040039 collected_by National Health Laboratory Service collection_date 2022-04-06 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866648 SAMN28054539 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040040 strain SARS-CoV-2 isolate K040040 collected_by National Health Laboratory Service collection_date 2022-04-06 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866649 SAMN28054384 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039885 strain SARS-CoV-2 isolate K039885 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866650 SAMN28054540 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040041 strain SARS-CoV-2 isolate K040041 collected_by National Health Laboratory Service collection_date 2022-04-09 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866651 SAMN28054541 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040042 strain SARS-CoV-2 isolate K040042 collected_by National Health Laboratory Service collection_date 2022-04-09 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866652 SAMN28054542 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040043 strain SARS-CoV-2 isolate K040043 collected_by National Health Laboratory Service collection_date 2022-04-17 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866653 SAMN28054543 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040044 strain SARS-CoV-2 isolate K040044 collected_by National Health Laboratory Service collection_date 2022-04-17 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866654 SAMN28054544 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040045 strain SARS-CoV-2 isolate K040045 collected_by National Health Laboratory Service collection_date 2022-04-17 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866655 SAMN28054545 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040046 strain SARS-CoV-2 isolate K040046 collected_by National Health Laboratory Service collection_date 2022-04-17 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866656 SAMN28054546 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040047 strain SARS-CoV-2 isolate K040047 collected_by National Health Laboratory Service collection_date 2022-04-17 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866657 SAMN28054547 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040048 strain SARS-CoV-2 isolate K040048 collected_by National Health Laboratory Service collection_date 2022-04-18 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866658 SAMN28054548 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040049 strain SARS-CoV-2 isolate K040049 collected_by National Health Laboratory Service collection_date 2022-04-17 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866659 SAMN28054549 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040050 strain SARS-CoV-2 isolate K040050 collected_by National Health Laboratory Service collection_date 2022-04-17 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866660 SAMN28054385 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039886 strain SARS-CoV-2 isolate K039886 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866661 SAMN28054550 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040051 strain SARS-CoV-2 isolate K040051 collected_by National Health Laboratory Service collection_date 2022-04-16 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866662 SAMN28054551 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040052 strain SARS-CoV-2 isolate K040052 collected_by National Health Laboratory Service collection_date 2022-04-17 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866663 SAMN28054552 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040053 strain SARS-CoV-2 isolate K040053 collected_by National Health Laboratory Service collection_date 2022-04-17 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866664 SAMN28053932 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040153 strain SARS-CoV-2 isolate K040153 collected_by National Health Laboratory Service collection_date 2022-04-15 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866665 SAMN28053931 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040152 strain SARS-CoV-2 isolate K040152 collected_by National Health Laboratory Service collection_date 2022-04-13 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866666 SAMN28053933 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040154 strain SARS-CoV-2 isolate K040154 collected_by National Health Laboratory Service collection_date 2022-04-13 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866667 SAMN28053935 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040156 strain SARS-CoV-2 isolate K040156 collected_by National Health Laboratory Service collection_date 2022-04-16 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866668 SAMN28053936 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040157 strain SARS-CoV-2 isolate K040157 collected_by National Health Laboratory Service collection_date 2022-04-16 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866669 SAMN28053937 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040158 strain SARS-CoV-2 isolate K040158 collected_by National Health Laboratory Service collection_date 2022-04-15 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866670 SAMN28054562 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040207 strain SARS-CoV-2 isolate K040207 collected_by National Health Laboratory Service collection_date 2022-04-22 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866671 SAMN28054563 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040208 strain SARS-CoV-2 isolate K040208 collected_by National Health Laboratory Service collection_date 2022-04-22 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866672 SAMN28054564 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040209 strain SARS-CoV-2 isolate K040209 collected_by National Health Laboratory Service collection_date 2022-04-21 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866673 SAMN28054565 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040210 strain SARS-CoV-2 isolate K040210 collected_by National Health Laboratory Service collection_date 2022-04-22 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866674 SAMN28054566 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040211 strain SARS-CoV-2 isolate K040211 collected_by National Health Laboratory Service collection_date 2022-04-22 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866675 SAMN28054567 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040212 strain SARS-CoV-2 isolate K040212 collected_by National Health Laboratory Service collection_date 2022-04-22 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866676 SAMN28054568 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040213 strain SARS-CoV-2 isolate K040213 collected_by National Health Laboratory Service collection_date 2022-04-22 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866677 SAMN28054390 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039891 strain SARS-CoV-2 isolate K039891 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866678 SAMN28054569 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040214 strain SARS-CoV-2 isolate K040214 collected_by National Health Laboratory Service collection_date 2022-04-23 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866679 SAMN28054570 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040215 strain SARS-CoV-2 isolate K040215 collected_by National Health Laboratory Service collection_date 2022-04-21 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866680 SAMN28054571 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040216 strain SARS-CoV-2 isolate K040216 collected_by National Health Laboratory Service collection_date 2022-04-21 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866681 SAMN28054572 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040217 strain SARS-CoV-2 isolate K040217 collected_by National Health Laboratory Service collection_date 2022-04-21 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866682 SAMN28054573 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040218 strain SARS-CoV-2 isolate K040218 collected_by National Health Laboratory Service collection_date 2022-04-21 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866683 SAMN28054574 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040219 strain SARS-CoV-2 isolate K040219 collected_by National Health Laboratory Service collection_date 2022-04-21 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866684 SAMN28054575 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040220 strain SARS-CoV-2 isolate K040220 collected_by National Health Laboratory Service collection_date 2022-04-21 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866685 SAMN28054576 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040221 strain SARS-CoV-2 isolate K040221 collected_by National Health Laboratory Service collection_date 2022-04-21 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866686 SAMN28054577 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040222 strain SARS-CoV-2 isolate K040222 collected_by National Health Laboratory Service collection_date 2022-04-21 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866687 SAMN28054578 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040223 strain SARS-CoV-2 isolate K040223 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866688 SAMN28054391 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039892 strain SARS-CoV-2 isolate K039892 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866689 SAMN28054579 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040224 strain SARS-CoV-2 isolate K040224 collected_by National Health Laboratory Service collection_date 2022-04-21 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866690 SAMN28054580 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040225 strain SARS-CoV-2 isolate K040225 collected_by National Health Laboratory Service collection_date 2022-04-21 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866691 SAMN28054581 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040226 strain SARS-CoV-2 isolate K040226 collected_by National Health Laboratory Service collection_date 2022-04-21 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866692 SAMN28054582 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040227 strain SARS-CoV-2 isolate K040227 collected_by National Health Laboratory Service collection_date 2022-04-22 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866693 SAMN28054583 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040228 strain SARS-CoV-2 isolate K040228 collected_by National Health Laboratory Service collection_date 2022-04-21 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866694 SAMN28054584 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040229 strain SARS-CoV-2 isolate K040229 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866695 SAMN28054586 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040231 strain SARS-CoV-2 isolate K040231 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866696 SAMN28054585 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040230 strain SARS-CoV-2 isolate K040230 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866697 SAMN28054587 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K040232 strain SARS-CoV-2 isolate K040232 collected_by National Health Laboratory Service collection_date 2022-04-20 geo_loc_name South Africa: Kwazulu-Natal host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866698 SAMN28054402 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039903 strain SARS-CoV-2 isolate K039903 collected_by National Health Laboratory Service collection_date 2022-04-09 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866699 SAMN28054403 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039904 strain SARS-CoV-2 isolate K039904 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866700 SAMN28054404 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039905 strain SARS-CoV-2 isolate K039905 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866701 SAMN28054405 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039906 strain SARS-CoV-2 isolate K039906 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866702 SAMN28054406 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039907 strain SARS-CoV-2 isolate K039907 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866703 SAMN28054407 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039908 strain SARS-CoV-2 isolate K039908 collected_by National Health Laboratory Service collection_date 2022-04-09 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866704 SAMN28054371 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039872 strain SARS-CoV-2 isolate K039872 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866705 SAMN28054408 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039909 strain SARS-CoV-2 isolate K039909 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866706 SAMN28054409 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039910 strain SARS-CoV-2 isolate K039910 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866707 SAMN28054411 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039912 strain SARS-CoV-2 isolate K039912 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866708 SAMN28054412 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039913 strain SARS-CoV-2 isolate K039913 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866709 SAMN28054413 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039914 strain SARS-CoV-2 isolate K039914 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866710 SAMN28054414 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039915 strain SARS-CoV-2 isolate K039915 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866711 SAMN28054415 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039916 strain SARS-CoV-2 isolate K039916 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866712 SAMN28054416 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039917 strain SARS-CoV-2 isolate K039917 collected_by National Health Laboratory Service collection_date 2022-04-09 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866713 SAMN28054417 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039918 strain SARS-CoV-2 isolate K039918 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866714 SAMN28054418 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039919 strain SARS-CoV-2 isolate K039919 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866715 SAMN28054372 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039873 strain SARS-CoV-2 isolate K039873 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866716 SAMN28054419 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039920 strain SARS-CoV-2 isolate K039920 collected_by National Health Laboratory Service collection_date 2022-04-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866717 SAMN28054420 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039921 strain SARS-CoV-2 isolate K039921 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866718 SAMN28054421 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039922 strain SARS-CoV-2 isolate K039922 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866719 SAMN28054422 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039923 strain SARS-CoV-2 isolate K039923 collected_by National Health Laboratory Service collection_date 2022-04-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866720 SAMN28054423 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039924 strain SARS-CoV-2 isolate K039924 collected_by National Health Laboratory Service collection_date 2022-04-12 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS12866721 SAMN28054424 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K039925 strain SARS-CoV-2 isolate K039925 collected_by National Health Laboratory Service collection_date 2022-04-08 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated