SRS12986234 SAMN27030576 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031130348/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.33 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986235 SAMN27030575 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031132617/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.6 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986236 SAMN27030574 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031133434/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 56 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.04 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986237 SAMN27030572 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031136947/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.88 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986238 SAMN27030571 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031139951/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.88 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986239 SAMN27030573 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031135407/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.18 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986240 SAMN27030570 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031140437/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 78 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.2 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986241 SAMN27030569 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031142254/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.98 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986242 SAMN27030568 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031143902/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.74 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986243 SAMN27030567 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031143949/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.76 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986244 SAMN27030566 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031148867/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 76 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.09 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986245 SAMN27030565 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031150879/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.37 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986246 SAMN27030564 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031153874/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.16 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986247 SAMN27030563 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031155408/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.76 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986248 SAMN27030562 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031159875/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.04 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986249 SAMN27030561 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031160956/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.57 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986250 SAMN27030432 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031431845/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.37 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986251 SAMN27030430 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031432775/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 12.19 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986252 SAMN27030431 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031431908/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source Information not provided geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race Unknown collection_device Information not provided collection_method Information not provided purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Panther Fusion diagnostic_pcr_Ct_value_1 22.3 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986253 SAMN27030429 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031433084/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.41 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986254 SAMN27030428 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031433150/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 20.5395 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986255 SAMN27030427 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031433241/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 29.98 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986256 SAMN27030426 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031434236/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.3 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986257 SAMN27030425 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031434783/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 16.4818 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986258 SAMN27030424 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031435275/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 4 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.16 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986259 SAMN27030423 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031435819/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.83 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986260 SAMN27030422 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031436046/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.93 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986261 SAMN27030420 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031437039/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.27 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986262 SAMN27030421 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031436907/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 17.7183 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986263 SAMN27030419 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031437550/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.18 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986264 SAMN27030418 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031437640/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 26.9736 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986265 SAMN27030417 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031441071/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 15.3512 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986266 SAMN27030416 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031441151/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 10 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 26.0858 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986267 SAMN27030415 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031441499/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 73 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Panther Fusion diagnostic_pcr_Ct_value_1 25.3 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986268 SAMN27030414 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031441691/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 11 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 28.02 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986269 SAMN27030413 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031441705/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.59 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986270 SAMN27030412 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031442235/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.4 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986271 SAMN27030411 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031442730/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 30.09 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986272 SAMN27030409 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031443741/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 2 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.91 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986273 SAMN27030410 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031443672/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.38 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986274 SAMN27030408 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031444007/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 63 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Panther Fusion diagnostic_pcr_Ct_value_1 25.3 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986275 SAMN27030407 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031444370/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.48 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986276 SAMN27030406 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031444751/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 23.7489 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986277 SAMN27030405 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031444916/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 27.37 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986278 SAMN27030404 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031445304/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.37 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986279 SAMN27030403 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031445864/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 80 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.73 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986280 SAMN27030402 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031447592/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.73 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986281 SAMN27030401 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031447857/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.42 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986282 SAMN27030304 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031560824/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.05 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986283 SAMN27030303 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031563488/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 31.1495 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986285 SAMN27030301 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031564699/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 16.8293 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986286 SAMN27030300 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031564940/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 21.2505 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986287 SAMN27030299 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031569757/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 25.1987 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986288 SAMN27030298 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031570691/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 18.6773 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986289 SAMN27030297 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031572798/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 23.5167 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986290 SAMN27030296 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031573317/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 73 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 11.28 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986291 SAMN27030295 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031574465/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 21.1717 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986292 SAMN27030294 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031574839/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.9687 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986293 SAMN27030293 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031575915/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 31.8655 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986294 SAMN27030292 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031578398/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 20.7781 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986295 SAMN27030291 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031578842/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 65 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 27.2094 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986296 SAMN27030290 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031579069/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 18.4346 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986297 SAMN27030289 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031579097/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 69 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.06 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986298 SAMN27030288 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031579426/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 9 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 33.3265 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986299 SAMN27030287 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031579624/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.99 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986300 SAMN27030286 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031580900/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.3 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986301 SAMN27030285 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031581495/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Panther Fusion diagnostic_pcr_Ct_value_1 19.5 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986302 SAMN27030284 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031582066/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.2745 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986303 SAMN27030283 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031582416/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Panther Fusion diagnostic_pcr_Ct_value_1 23.3 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986304 SAMN27030282 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031583104/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source Nasal swab Nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 56 host_race White collection_device Nasal swab Nasal swab collection_method Nasal swab Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.68 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986305 SAMN27030281 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031584386/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 27.8 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986306 SAMN27030280 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031588637/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 18.7353 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986307 SAMN27030279 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031589597/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 18.0075 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986308 SAMN27030278 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031591938/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 22.6557 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986309 SAMN27030277 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031594908/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 29.3107 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986310 SAMN27030276 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031595272/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 30.0973 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986311 SAMN27030275 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031598084/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.94 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986312 SAMN27030274 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031598295/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 22.8639 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986313 SAMN27030273 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031598389/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 26.1271 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986314 SAMN27030144 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031820417/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 29.4731 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986315 SAMN27030143 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031820622/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 9 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 27.759 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986316 SAMN27030141 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031830231/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 70 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 27.9744 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986317 SAMN27030142 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031825298/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 20.6885 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986318 SAMN27030140 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031832289/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.1067 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986319 SAMN27030139 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031833583/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 28.4485 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986320 SAMN27030138 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031833701/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 31.0956 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986321 SAMN27030137 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031833926/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 6 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 21.9968 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986322 SAMN27030136 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031835177/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 21.9311 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986323 SAMN27030134 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031842893/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.2195 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986325 SAMN27030135 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031835354/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 20.7705 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986327 SAMN27030132 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031843874/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 3 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.5578 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986329 SAMN27030129 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031850427/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 23.8747 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986331 SAMN27030127 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031854952/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 63 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 27.1712 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986333 SAMN27030124 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031858106/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 27.8917 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986335 SAMN27030125 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031856587/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 22.9699 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986337 SAMN27030121 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031865168/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 54 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 26.9347 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986339 SAMN27030118 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031869530/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.2898 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986341 SAMN27030117 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031870307/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 32.5718 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986343 SAMN27030115 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031871904/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 27.8363 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986345 SAMN27030114 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031874207/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 21.4493 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986347 SAMN27030527 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031231583/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.65 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986349 SAMN27030525 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031234071/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.7 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986351 SAMN27030523 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031235357/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.96 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986353 SAMN27030522 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031236302/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.81 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986355 SAMN27030519 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031244612/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 5 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.48 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986357 SAMN27030517 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031252190/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 22.2119 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986359 SAMN27030514 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031263372/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 54 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.42 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986361 SAMN27030513 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031265307/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 29.2151 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986363 SAMN27030510 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031271896/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 75 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.96 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986365 SAMN27030509 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031274889/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.78 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986367 SAMN27030508 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031281677/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 63 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.55 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986369 SAMN27030505 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031294078/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 3 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.61 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986284 SAMN27030302 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031563719/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 20.4462 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986324 SAMN27030133 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031842921/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.9463 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986326 SAMN27030131 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031844431/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 72 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.1978 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986328 SAMN27030130 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031847966/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 11 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 21.9874 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986330 SAMN27030128 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031851153/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 29.8046 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986332 SAMN27030126 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031855243/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 32.4168 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986334 SAMN27030123 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031864055/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 21.1719 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986336 SAMN27030122 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031864715/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 33.8343 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986338 SAMN27030120 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031866851/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 54 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 20.998 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986340 SAMN27030119 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031869523/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 20.9414 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986342 SAMN27030116 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031870818/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 25.3843 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986344 SAMN27030113 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031874703/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 25.1615 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986346 SAMN27030528 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031230406/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Native Hawaiian or Other Pacific Islander collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.743 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986348 SAMN27030526 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031232112/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.32 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986350 SAMN27030524 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031234923/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 1 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.4 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986352 SAMN27030521 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031239108/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.42 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986354 SAMN27030520 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031240731/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 28.07 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986356 SAMN27030518 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031251330/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 78 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.88 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986358 SAMN27030516 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031253057/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.96 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986360 SAMN27030515 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031258240/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.12 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986362 SAMN27030512 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031267992/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.5949 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986364 SAMN27030511 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031268181/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 70 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.75 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986366 SAMN27030507 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031285166/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 26.5798 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986368 SAMN27030506 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031293001/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.1 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986370 SAMN27030504 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031294747/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.73 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986371 SAMN27030503 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031300662/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.31 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986372 SAMN27030501 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031303593/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.27 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986373 SAMN27030502 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031301421/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race American Indian or Alaska Native collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 22.8625 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986374 SAMN27030499 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031308405/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.41 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986375 SAMN27030500 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031307639/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.54 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986376 SAMN27030498 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031311784/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.71 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986377 SAMN27030497 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031313144/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 2 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.78 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986378 SAMN27030400 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031448536/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.04 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986379 SAMN27030398 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031450025/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.19 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986380 SAMN27030399 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031448664/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 80 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 32.2 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986381 SAMN27030397 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031450928/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.01 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986382 SAMN27030396 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031451789/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.05 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986383 SAMN27030395 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031452165/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 7 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.11 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986384 SAMN27030394 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031452533/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 31.63 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986385 SAMN27030393 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031453758/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 1 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 31.45 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986386 SAMN27030391 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031454567/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 30.37 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986387 SAMN27030392 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031454253/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.46 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986388 SAMN27030389 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031456641/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 67 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.05 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986389 SAMN27030390 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031455354/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 9 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.35 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986390 SAMN27030387 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031461715/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.44 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986391 SAMN27030388 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031458182/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.71 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986392 SAMN27030386 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031463654/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 31.7624 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986393 SAMN27030385 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031463883/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 3 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.62 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986394 SAMN27030384 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031464167/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.96 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986395 SAMN27030383 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031464867/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.37 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986396 SAMN27030382 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031467087/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.61 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986397 SAMN27030380 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031468320/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 22.3737 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986398 SAMN27030381 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031467301/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 29.36 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986399 SAMN27030379 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031468440/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.02 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986400 SAMN27030377 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031469172/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.88 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986401 SAMN27030378 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031468797/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 17.3878 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986402 SAMN27030376 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031469709/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.36 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986403 SAMN27030373 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031473146/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 28.64 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986404 SAMN27030374 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031471241/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.2 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986405 SAMN27030375 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031471079/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.91 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986406 SAMN27030370 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031476887/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.59 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986407 SAMN27030372 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031474054/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.53 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986408 SAMN27030371 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031474984/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 2 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 29.3058 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986409 SAMN27030272 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031598756/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.2437 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986410 SAMN27030271 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031602115/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.0764 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986411 SAMN27030369 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031477236/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasopharyngeal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 28.37 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986412 SAMN27030269 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031603189/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 72 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.4071 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986413 SAMN27030270 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031602317/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.6 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986414 SAMN27030267 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031605247/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race Native Hawaiian or Other Pacific Islander collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.86 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986415 SAMN27030268 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031604428/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.3448 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986416 SAMN27030266 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031605498/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 23.3761 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986417 SAMN27030264 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031607694/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 23.3025 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986418 SAMN27030265 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031607243/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 27.8101 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986419 SAMN27030263 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031608455/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 31 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.4 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986420 SAMN27030262 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031612085/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.6179 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986421 SAMN27030261 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031613715/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.5927 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986422 SAMN27030260 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031618612/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.65 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986423 SAMN27030257 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031622010/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 23.4605 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986424 SAMN27030259 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031618998/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.61 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986425 SAMN27030258 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031620355/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 9 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.391 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986426 SAMN27030256 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031624571/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 26.1046 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986427 SAMN27030254 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031626655/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.9819 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986428 SAMN27030255 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031624751/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 27.7155 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986429 SAMN27030253 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031626852/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.31 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986430 SAMN27030252 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031627679/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.25 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986431 SAMN27030251 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031629035/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.7248 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986432 SAMN27030250 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031629236/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.74 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986433 SAMN27030249 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031631672/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 11 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.56 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986434 SAMN27030248 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031633008/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.04 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986435 SAMN27030246 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031633848/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.97 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986436 SAMN27030247 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031633522/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 30.22 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986437 SAMN27030243 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031634166/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.61 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986438 SAMN27030244 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031634052/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Black or African American collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Unknown diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986439 SAMN27030242 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031634472/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 15.0633 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986440 SAMN27030245 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031633905/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.52 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986441 SAMN27030241 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031636080/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 28.5396 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986442 SAMN27030207 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031675256/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.87 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986443 SAMN27030208 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031672799/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 32.4291 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986444 SAMN27030206 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031679060/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 20.7744 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986445 SAMN27030205 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031680079/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 25.5368 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986446 SAMN27030204 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031680744/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.73 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986447 SAMN27030203 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031682099/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.86 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986448 SAMN27030202 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031682297/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.51 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986449 SAMN27030199 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031683867/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.87 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986450 SAMN27030201 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031683211/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 25.839 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986451 SAMN27030200 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031683565/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 26.891 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986452 SAMN27030196 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031685020/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 66 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Unknown diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986453 SAMN27030198 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031684030/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race Black or African American collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Panther Fusion diagnostic_pcr_Ct_value_1 19.2 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986454 SAMN27030195 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031689848/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 26.802 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986455 SAMN27030197 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031684179/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 31.7913 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986456 SAMN27030192 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031691562/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 23.1432 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986457 SAMN27030194 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031690002/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.79 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986458 SAMN27030193 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031690310/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 25.4278 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986459 SAMN27030191 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031692330/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 17.5615 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986460 SAMN27030190 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031696734/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 18.329 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986461 SAMN27030189 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031697604/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Panther Fusion diagnostic_pcr_Ct_value_1 18.2 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986462 SAMN27030188 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031701880/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 21.0903 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986463 SAMN27030187 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031703930/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 31.8593 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986464 SAMN27030186 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031705594/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 26.5312 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986465 SAMN27030185 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031708656/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 67 host_race Asian collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Panther Fusion diagnostic_pcr_Ct_value_1 17.7 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986466 SAMN27030184 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031712331/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 78 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 27.0113 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986467 SAMN27030183 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031717988/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Panther Fusion diagnostic_pcr_Ct_value_1 32.4 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986468 SAMN27030182 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031726118/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 25.0337 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986469 SAMN27030181 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031730708/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 11 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.0977 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986470 SAMN27030180 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031737066/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 29.7462 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986471 SAMN27030179 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031742097/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 17.0112 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986472 SAMN27030177 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031753484/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 68 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 18.9363 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986473 SAMN27030178 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031747589/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 26.2442 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986474 SAMN27030111 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031880111/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 25.8159 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986475 SAMN27030112 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031879691/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 10 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 20.852 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986476 SAMN27030110 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031884221/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 22.2323 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986477 SAMN27030109 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031885971/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 20.6832 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986478 SAMN27030108 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031886298/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 31.6635 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986479 SAMN27030107 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031894923/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 22.8732 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986480 SAMN27030105 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031897347/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 15.8446 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986481 SAMN27030106 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031895099/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 79 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 22.4348 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986482 SAMN27030104 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031897773/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 31.3933 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986483 SAMN27030103 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031900977/2022 collected_by UW Virology Lab collection_date 2022-03-19 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.6122 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986484 SAMN27030102 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031932269/2022 collected_by UW Virology Lab collection_date 2022-03-19 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 18.9714 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986485 SAMN27030101 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031935041/2022 collected_by UW Virology Lab collection_date 2022-03-19 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 65 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 15.317 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986486 SAMN27030099 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031946203/2022 collected_by UW Virology Lab collection_date 2022-03-19 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 26.7843 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986487 SAMN27030100 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031940871/2022 collected_by UW Virology Lab collection_date 2022-03-19 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 32.3627 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986488 SAMN27030097 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031949221/2022 collected_by UW Virology Lab collection_date 2022-03-19 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.8224 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986489 SAMN27030098 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031947856/2022 collected_by UW Virology Lab collection_date 2022-03-19 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 27.7023 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986490 SAMN27030096 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031952396/2022 collected_by UW Virology Lab collection_date 2022-03-19 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 30.8589 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986491 SAMN27030095 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031953013/2022 collected_by UW Virology Lab collection_date 2022-03-19 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 17.0427 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986492 SAMN27030093 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031967830/2022 collected_by UW Virology Lab collection_date 2022-03-19 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.2602 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986493 SAMN27030094 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031966527/2022 collected_by UW Virology Lab collection_date 2022-03-19 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 25.9715 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986494 SAMN27030092 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031968771/2022 collected_by UW Virology Lab collection_date 2022-03-19 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 21.2937 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986495 SAMN27030091 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031969774/2022 collected_by UW Virology Lab collection_date 2022-03-19 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 9 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 17.0722 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986496 SAMN27030089 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031980682/2022 collected_by UW Virology Lab collection_date 2022-03-19 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 4 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 29.6826 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986497 SAMN27030090 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031980384/2022 collected_by UW Virology Lab collection_date 2022-03-19 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 1 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.8199 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986498 SAMN27030688 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22030904248/2022 collected_by UW Virology Lab collection_date 2022-03-09 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.51 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986499 SAMN27030088 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031994410/2022 collected_by UW Virology Lab collection_date 2022-03-19 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 27.0474 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986500 SAMN27030687 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22030915955/2022 collected_by UW Virology Lab collection_date 2022-03-09 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.36 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986501 SAMN27030685 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22030918846/2022 collected_by UW Virology Lab collection_date 2022-03-09 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.97 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986502 SAMN27030686 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22030917813/2022 collected_by UW Virology Lab collection_date 2022-03-09 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.45 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986503 SAMN27030684 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22030920827/2022 collected_by UW Virology Lab collection_date 2022-03-09 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 59 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.49 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986504 SAMN27030683 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22030936512/2022 collected_by UW Virology Lab collection_date 2022-03-09 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.21 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986505 SAMN27030682 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22030937025/2022 collected_by UW Virology Lab collection_date 2022-03-09 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.1 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986506 SAMN27030681 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22030949135/2022 collected_by UW Virology Lab collection_date 2022-03-09 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.69 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986507 SAMN27030679 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22030951193/2022 collected_by UW Virology Lab collection_date 2022-03-09 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.89 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986508 SAMN27030680 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22030950700/2022 collected_by UW Virology Lab collection_date 2022-03-09 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 4 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.21 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986509 SAMN27030678 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22030952397/2022 collected_by UW Virology Lab collection_date 2022-03-09 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.3022 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986510 SAMN27030677 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22030955890/2022 collected_by UW Virology Lab collection_date 2022-03-09 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 63 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.66 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986511 SAMN27030676 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22030958554/2022 collected_by UW Virology Lab collection_date 2022-03-09 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.97 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986512 SAMN27030675 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22030971416/2022 collected_by UW Virology Lab collection_date 2022-03-09 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.3646 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986513 SAMN27030674 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22030976462/2022 collected_by UW Virology Lab collection_date 2022-03-09 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.7679 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986514 SAMN27030673 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22030979483/2022 collected_by UW Virology Lab collection_date 2022-03-09 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.54 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986515 SAMN27030672 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22030982490/2022 collected_by UW Virology Lab collection_date 2022-03-09 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.41 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986516 SAMN27030670 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031000005/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.09 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986517 SAMN27030671 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22030983357/2022 collected_by UW Virology Lab collection_date 2022-03-09 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.29 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986518 SAMN27030668 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031001200/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 35.67 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986519 SAMN27030669 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031001145/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.07 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986520 SAMN27030667 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031003446/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.67 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986521 SAMN27030666 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031004619/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 3 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.75 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986522 SAMN27030665 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031007889/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.38 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986523 SAMN27030664 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031009219/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.16 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986524 SAMN27030662 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031009823/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.29 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986525 SAMN27030663 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031009356/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.11 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986526 SAMN27030661 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031009859/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.14 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986527 SAMN27030660 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031013427/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race Other Race collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.05 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986528 SAMN27030659 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031015749/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.35 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986529 SAMN27030658 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031018378/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 4 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.2 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986530 SAMN27030657 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031020794/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.28 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986531 SAMN27030623 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031054248/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.31 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986532 SAMN27030624 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031053767/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 33.09 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986533 SAMN27030622 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031056785/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.7 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986534 SAMN27030621 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031057468/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.36 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986535 SAMN27030620 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031058002/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.26 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986536 SAMN27030619 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031058016/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 70 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.9 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986537 SAMN27030618 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031058480/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.33 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986538 SAMN27030617 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031059778/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.91 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986539 SAMN27030615 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031063365/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.84 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986540 SAMN27030616 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031060048/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.52 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986541 SAMN27030614 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031069198/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.87 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986542 SAMN27030613 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031069999/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.46 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986543 SAMN27030612 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031073425/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.61 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986544 SAMN27030611 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031075534/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.18 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986545 SAMN27030610 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031075994/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.97 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986546 SAMN27030609 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031076320/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 58 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.08 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986547 SAMN27030608 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031078683/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 31.72 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986548 SAMN27030607 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031079673/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 54 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 32.07 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986549 SAMN27030606 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031086385/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.33 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986550 SAMN27030605 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031088679/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source Information not provided geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race Unknown collection_device Information not provided collection_method Information not provided purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.97 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986551 SAMN27030604 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031089093/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.74 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986552 SAMN27030603 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031090241/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.89 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986553 SAMN27030602 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031090983/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 82 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.36 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986554 SAMN27030601 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031092787/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 71 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.29 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986555 SAMN27030599 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031101692/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.91 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986556 SAMN27030600 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031096271/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.23 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986557 SAMN27030598 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031101999/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasopharyngeal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.76 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986558 SAMN27030597 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031106291/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.4 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986559 SAMN27030596 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031106985/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.04 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986560 SAMN27030595 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031107259/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.49 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986561 SAMN27030594 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031109794/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.27 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986562 SAMN27030593 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031112209/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.05 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986563 SAMN27030464 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031411729/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nares geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 71 host_race White collection_device Nares collection_method Nares purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Panther Fusion diagnostic_pcr_Ct_value_1 33.1 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986564 SAMN27030463 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031412216/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.43 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986565 SAMN27030462 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031412517/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 33 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.8 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986566 SAMN27030461 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031413079/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 56 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 20.9997 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986567 SAMN27030460 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031413958/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 28.95 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986568 SAMN27030459 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031414624/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 31.85 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986569 SAMN27030458 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031415983/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.26 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986570 SAMN27030456 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031416827/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.85 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986571 SAMN27030457 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031416032/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.48 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986572 SAMN27030455 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031416963/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 22.7739 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986573 SAMN27030454 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031417610/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 1 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.9 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986574 SAMN27030453 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031417624/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 28.27 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986575 SAMN27030452 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031418080/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.67 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986576 SAMN27030451 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031418167/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 63 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 32.61 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986577 SAMN27030450 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031419766/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.42 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986578 SAMN27030449 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031420717/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.13 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986579 SAMN27030448 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031420859/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.86 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986580 SAMN27030447 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031421597/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.79 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986581 SAMN27030446 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031422018/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.83 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986582 SAMN27030444 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031425024/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.54 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986583 SAMN27030445 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031424416/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.6781 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986584 SAMN27030443 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031425114/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.48 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986585 SAMN27030442 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031425927/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.81 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986586 SAMN27030439 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031427113/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.78 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986587 SAMN27030440 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031426833/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 32.63 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986588 SAMN27030441 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031426622/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.63 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986589 SAMN27030437 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031428584/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 2 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.75 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986590 SAMN27030438 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031427192/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.65 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986591 SAMN27030436 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031429100/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.35 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986592 SAMN27030435 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031430062/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.84 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986593 SAMN27030434 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031430723/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.51 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986594 SAMN27030336 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031506144/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.02 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986595 SAMN27030433 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031431771/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.04 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986596 SAMN27030335 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031507525/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 6 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 20.2652 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986597 SAMN27030334 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031507788/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 25.9633 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986598 SAMN27030333 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031509755/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 26.7089 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986599 SAMN27030332 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031511111/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.81 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986600 SAMN27030330 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031514981/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.96 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986601 SAMN27030331 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031514757/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 54 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 16.7831 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986602 SAMN27030329 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031515539/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 16.8697 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986603 SAMN27030328 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031516000/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 69 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 22.0213 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986604 SAMN27030327 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031516033/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.61 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986605 SAMN27030325 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031522380/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 23.419 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986606 SAMN27030326 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031519918/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.7 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986607 SAMN27030324 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031523655/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.1271 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986608 SAMN27030323 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031525268/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.8 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986609 SAMN27030322 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031526476/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 6 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 16.5478 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986610 SAMN27030321 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031528307/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 30.9106 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986611 SAMN27030320 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031528562/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 9 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 27.0181 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986612 SAMN27030319 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031529760/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.5562 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986613 SAMN27030317 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031530385/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.79 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986614 SAMN27030318 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031530279/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 29.648 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986615 SAMN27030316 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031533358/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 62 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.133 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986616 SAMN27030315 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031535122/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 26.5161 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986617 SAMN27030314 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031535908/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.8288 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986618 SAMN27030312 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031544605/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 54 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 17.0028 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986619 SAMN27030313 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031540118/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 29.2429 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986620 SAMN27030311 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031544693/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Panther Fusion diagnostic_pcr_Ct_value_1 18.2 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986621 SAMN27030310 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031546352/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 18.8679 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986622 SAMN27030309 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031548798/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.03 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986623 SAMN27030308 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031551108/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 22.8873 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986624 SAMN27030306 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031556265/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.29 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986625 SAMN27030307 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031554977/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 25.209 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986626 SAMN27030176 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031755933/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 21.5564 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986627 SAMN27030305 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031557139/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.9158 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986628 SAMN27030174 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031762435/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 20.84 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986629 SAMN27030175 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031760551/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 17.8804 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986630 SAMN27030173 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031763413/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.7194 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986631 SAMN27030172 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031765984/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 20.4464 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986632 SAMN27030171 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031767295/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 23.6555 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986633 SAMN27030170 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031768199/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 18.413 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986634 SAMN27030168 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031772473/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 21.226 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986635 SAMN27030169 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031771875/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 78 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 16.4647 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986636 SAMN27030167 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031772520/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 26.2449 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986637 SAMN27030166 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031773296/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 18.8051 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986638 SAMN27030165 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031776716/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 27.7864 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986639 SAMN27030164 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031780140/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.1206 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986640 SAMN27030163 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031783470/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 21.739 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986641 SAMN27030161 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031790048/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 23.8185 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986642 SAMN27030162 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031784620/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 4 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 22.9176 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986643 SAMN27030159 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031801703/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 0 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 22.0476 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986644 SAMN27030160 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031794941/2022 collected_by UW Virology Lab collection_date 2022-03-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 7 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 18.2031 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986645 SAMN27030157 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031803472/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 32.3744 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986646 SAMN27030158 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031803103/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 16.2034 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986647 SAMN27030156 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031805533/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.241 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986648 SAMN27030155 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031806481/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 66 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 18.6678 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986649 SAMN27030153 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031809180/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 22.4477 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986650 SAMN27030154 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031808145/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 18.43 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986651 SAMN27030151 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031810775/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 22.2259 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986652 SAMN27030150 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031814562/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 17.738 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986653 SAMN27030152 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031810067/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.9506 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986654 SAMN27030149 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031815787/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 4 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 20.2069 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986655 SAMN27030148 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031816032/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.7926 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986656 SAMN27030147 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031816712/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 21.5984 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986657 SAMN27030146 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031817069/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 18.485 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986658 SAMN27030145 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031818686/2022 collected_by UW Virology Lab collection_date 2022-03-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 25.4107 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986659 SAMN27030656 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031020805/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.22 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986660 SAMN27030654 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031022293/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.66 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986661 SAMN27030655 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031022040/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.84 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986662 SAMN27030653 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031023392/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.29 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986663 SAMN27030652 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031025793/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.77 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986664 SAMN27030651 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031026451/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.79 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986665 SAMN27030650 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031027360/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.15 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986666 SAMN27030649 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031027602/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 64 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.41 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986667 SAMN27030648 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031027609/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.08 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986668 SAMN27030647 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031028368/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.71 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986669 SAMN27030646 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031028575/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.4 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986670 SAMN27030645 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031028875/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.5 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986671 SAMN27030644 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031029246/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.1 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986672 SAMN27030643 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031031104/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 3 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.58 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986673 SAMN27030642 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031033200/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.87 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986674 SAMN27030641 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031034000/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.64 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986675 SAMN27030640 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031035506/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.11 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986676 SAMN27030639 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031036200/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.38 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986677 SAMN27030638 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031036500/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.85 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986678 SAMN27030637 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031036944/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.43 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986679 SAMN27030635 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031041832/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race Other Race collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.31 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986680 SAMN27030636 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031041506/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.14 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986681 SAMN27030634 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031043327/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986682 SAMN27030631 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031047679/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.29 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986683 SAMN27030632 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031046275/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.95 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986684 SAMN27030633 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031044905/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.04 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986685 SAMN27030629 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031051593/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.75 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986686 SAMN27030627 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031052512/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.47 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986687 SAMN27030630 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031049981/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.01 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986688 SAMN27030628 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031052403/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.14 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986689 SAMN27030626 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031052971/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.55 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986690 SAMN27030625 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031053267/2022 collected_by UW Virology Lab collection_date 2022-03-10 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.95 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986691 SAMN27030560 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031161520/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.52 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986692 SAMN27030559 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031162797/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.06 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986693 SAMN27030557 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031166671/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.49 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986694 SAMN27030558 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031163773/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 56 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.7 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986695 SAMN27030556 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031169953/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source Unknown geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Unknown collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 INP diagnostic_pcr_Ct_value_1 INP lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986696 SAMN27030554 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031172327/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 66 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.57 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986697 SAMN27030553 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031174823/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 74 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.15 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986698 SAMN27030555 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031170926/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.51 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986699 SAMN27030551 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031176572/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.05 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986700 SAMN27030550 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031177625/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.81 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986701 SAMN27030552 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031175611/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.2 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986702 SAMN27030547 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031182462/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 7 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.63 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986703 SAMN27030548 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031182418/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.96 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986704 SAMN27030546 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031185122/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 4 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.37 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986705 SAMN27030549 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031181477/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.83 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986706 SAMN27030545 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031186405/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.69 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986707 SAMN27030543 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031187813/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 65 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.89 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986708 SAMN27030544 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031186841/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.84 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986709 SAMN27030542 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031188075/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.84 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986710 SAMN27030541 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031189898/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.69 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986711 SAMN27030540 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031190399/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.77 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986712 SAMN27030539 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031190584/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.04 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986713 SAMN27030538 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031197606/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.03 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986714 SAMN27030537 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031198423/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.48 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986715 SAMN27030536 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031198475/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.24 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986716 SAMN27030535 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031200521/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 56 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.5 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986717 SAMN27030534 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031202181/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.49 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986718 SAMN27030533 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031210944/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.26 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986719 SAMN27030532 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031213744/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.62 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986720 SAMN27030529 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031229648/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.13 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986721 SAMN27030530 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031219389/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.43 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986722 SAMN27030531 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031214852/2022 collected_by UW Virology Lab collection_date 2022-03-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.84 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986723 SAMN27030496 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031319406/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.17 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986724 SAMN27030494 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031321082/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.07 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986725 SAMN27030495 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031320204/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.2 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986726 SAMN27030493 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031323118/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Asian collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.87 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986727 SAMN27030492 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031331177/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 21.0558 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986728 SAMN27030491 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031336115/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.36 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986729 SAMN27030490 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031342234/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.71 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986730 SAMN27030489 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031344223/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.45 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986731 SAMN27030488 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031344517/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.3 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986732 SAMN27030487 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031345293/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.89 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986733 SAMN27030486 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031350817/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.01 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986734 SAMN27030485 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031358503/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 54 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.93 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986735 SAMN27030484 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031364217/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 66 host_race Unknown collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.55 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986736 SAMN27030483 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031365030/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 12 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.9 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986737 SAMN27030482 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031373430/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.2 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986738 SAMN27030481 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031380661/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.88 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986739 SAMN27030479 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031381870/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 26.7885 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986740 SAMN27030478 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031383972/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 66 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 25.4607 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986741 SAMN27030480 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031381839/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.24 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986742 SAMN27030476 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031390697/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 66 host_race Asian collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.7 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986743 SAMN27030477 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031386238/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.12 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986744 SAMN27030475 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031390819/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race Asian collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 14.43 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986745 SAMN27030474 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031393181/2022 collected_by UW Virology Lab collection_date 2022-03-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.59 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986746 SAMN27030471 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031405835/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.77 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986747 SAMN27030473 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031400757/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 18.6378 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986748 SAMN27030472 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031403969/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.71 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986749 SAMN27030470 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031406485/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.65 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986750 SAMN27030467 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031408186/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 59 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.34 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986751 SAMN27030469 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031407176/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 30.89 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986752 SAMN27030468 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031408181/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 81 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.7 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986753 SAMN27030465 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031409285/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.26 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986754 SAMN27030466 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031408263/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.7 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986755 SAMN27030368 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031477245/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.66 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986756 SAMN27030367 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031478013/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 71 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 20.3953 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986757 SAMN27030366 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031482086/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.14 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986758 SAMN27030365 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031485390/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 9 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.67 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986759 SAMN27030364 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031485519/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.65 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986760 SAMN27030363 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031485642/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.5111 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986761 SAMN27030362 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031486771/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 31.83 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986762 SAMN27030361 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031488183/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.61 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986763 SAMN27030360 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031488270/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source Nasopharyngeal Swab Nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 68 host_race White collection_device Nasopharyngeal Swab Nasal swab collection_method Nasopharyngeal Swab Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Panther Fusion diagnostic_pcr_Ct_value_1 26.9 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986764 SAMN27030359 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031488645/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.17 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986765 SAMN27030358 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031489396/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 32.548 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986766 SAMN27030357 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031489723/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.42 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986767 SAMN27030356 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031489880/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.52 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986768 SAMN27030355 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031490458/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.75 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986769 SAMN27030354 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031490626/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.54 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986770 SAMN27030353 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031490719/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.33 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986771 SAMN27030352 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031490773/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.66 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986772 SAMN27030351 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031491791/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.65 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986773 SAMN27030350 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031492614/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 29.35 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986774 SAMN27030349 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031492814/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.5 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986775 SAMN27030348 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031492918/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 2 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 26.4339 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986776 SAMN27030347 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031493379/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.57 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986777 SAMN27030346 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031494104/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 65 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.95 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986778 SAMN27030345 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031496417/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 66 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.4 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986779 SAMN27030344 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031496664/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.58 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986780 SAMN27030343 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031497208/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 12 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.96 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986781 SAMN27030341 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031498317/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 30.1065 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986782 SAMN27030342 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031497745/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 65 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 12.03 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986783 SAMN27030340 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031498902/2022 collected_by UW Virology Lab collection_date 2022-03-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.5 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986784 SAMN27030339 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031502554/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 2 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.11 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986785 SAMN27030338 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031504098/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 20.7824 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986786 SAMN27030337 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031505380/2022 collected_by UW Virology Lab collection_date 2022-03-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 22.1129 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986787 SAMN27030240 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031638184/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 19.9859 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986788 SAMN27030239 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031639030/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 25.3037 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986789 SAMN27030238 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031641114/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 31.5886 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986790 SAMN27030236 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031642869/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 7 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 27.5167 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986791 SAMN27030235 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031643874/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.53 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986792 SAMN27030237 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031642724/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 26.1549 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986793 SAMN27030234 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031646060/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.72 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986794 SAMN27030233 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031647521/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 28.27 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986795 SAMN27030231 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031648862/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.2 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986796 SAMN27030232 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031648755/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.58 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986797 SAMN27030230 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031649142/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.06 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986798 SAMN27030229 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031649410/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 23.2425 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986799 SAMN27030228 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031649565/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 2 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.3522 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986800 SAMN27030227 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031650145/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 12.23 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986801 SAMN27030226 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031653401/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 25.4929 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986802 SAMN27030225 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031654126/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 18.7936 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986803 SAMN27030224 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031654854/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 20.4729 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986804 SAMN27030223 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031655204/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.96 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986805 SAMN27030222 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031656130/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.41 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986806 SAMN27030221 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031656277/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.45 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986807 SAMN27030220 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031660322/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 11.22 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986808 SAMN27030219 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031662144/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 22.4861 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986809 SAMN27030216 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031665334/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 64 host_race American Indian or Alaska Native collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Panther Fusion diagnostic_pcr_Ct_value_1 32.1 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986810 SAMN27030217 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031665005/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.27 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986811 SAMN27030218 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031662547/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 82 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 14.9709 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986812 SAMN27030215 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031665537/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 31.3602 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986813 SAMN27030214 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031665634/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 28.79 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986814 SAMN27030213 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031665769/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 64 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 27.16 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986815 SAMN27030211 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031667756/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 16.1265 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986816 SAMN27030212 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031666965/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.78 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986817 SAMN27030210 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031671250/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 28.0374 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986818 SAMN27030209 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031672637/2022 collected_by UW Virology Lab collection_date 2022-03-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.55 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986819 SAMN27030591 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031113944/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.02 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986820 SAMN27030592 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031112553/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.94 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986821 SAMN27030590 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031114367/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.25 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986822 SAMN27030589 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031114720/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.02 lineage/clade name BA.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986823 SAMN27030588 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031115700/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.23 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986824 SAMN27030587 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031121241/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 64 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.24 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986825 SAMN27030586 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031122368/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 69 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.14 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986826 SAMN27030584 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031122864/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.2 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986827 SAMN27030585 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031122843/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.42 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986828 SAMN27030583 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031124040/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.04 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986829 SAMN27030581 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031125631/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 2 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.33 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986830 SAMN27030582 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031125486/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 68 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.71 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986831 SAMN27030580 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031127155/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.87 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986832 SAMN27030578 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031129220/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.17 lineage/clade name BA.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986833 SAMN27030579 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031128687/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.4 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS12986834 SAMN27030577 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW22031129326/2022 collected_by UW Virology Lab collection_date 2022-03-11 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.88 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated