SRS15433975 SAMN23961933 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120151044/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Unknown diagnostic_pcr_Ct_value_1 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433976 SAMN23961932 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120152928/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.61 lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433977 SAMN23961954 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120136001/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.99 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433978 SAMN23961953 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120136368/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 58 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.74 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433979 SAMN23961952 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120136957/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.44 lineage/clade name AY.118 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433980 SAMN23961928 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120158143/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.42 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433981 SAMN23961927 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120158742/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Unknown collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Unknown diagnostic_pcr_Ct_value_1 Unknown lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433982 SAMN23961926 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120159216/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.91 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433983 SAMN23961904 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120175179/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.36 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433984 SAMN23961903 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120175514/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.88 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433985 SAMN23961902 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120176021/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 61 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.23 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433986 SAMN23961925 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120159853/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.67 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433987 SAMN23961924 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120160475/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.54 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433988 SAMN23961923 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120161400/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 12 host_race Native Hawaiian or Other Pacific Islander collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.49 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433989 SAMN23961922 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120161647/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.16 lineage/clade name AY.54 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433990 SAMN23961921 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120162459/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.07 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433991 SAMN23961920 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120162800/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.83 lineage/clade name AY.122 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433992 SAMN23961919 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120163439/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.46 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433993 SAMN23961918 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120164642/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.71 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433994 SAMN23961917 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120164849/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.78 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433995 SAMN23961916 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120165108/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.96 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433996 SAMN23961847 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120232527/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.23 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433997 SAMN23961842 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120239098/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.96 lineage/clade name AY.122 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433998 SAMN23961841 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120241467/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.2 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15433999 SAMN23961840 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120254456/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.74 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434000 SAMN23961839 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120255733/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.37 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434001 SAMN23961861 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120213109/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.71 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434002 SAMN23961860 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120216355/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.49 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434003 SAMN23961836 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120260883/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 13.65 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434004 SAMN23961835 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120261266/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 73 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.7 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434005 SAMN23961834 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120262500/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.26 lineage/clade name AY.36 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434006 SAMN23961833 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120263905/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.01 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434007 SAMN23961832 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120264569/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.12 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434008 SAMN23961831 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120264772/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.65 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434009 SAMN23961830 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120264989/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.47 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434010 SAMN23961829 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120267519/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.03 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434011 SAMN23961828 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120268974/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 14.91 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434012 SAMN23961827 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120271572/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.9 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434013 SAMN23961826 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120276239/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.37 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434014 SAMN23961825 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120276339/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.93 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434015 SAMN23961824 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120278649/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 7 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.27 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434016 SAMN23961846 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120234927/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.38 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434017 SAMN23961845 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120235557/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.61 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434018 SAMN23961844 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120236776/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.03 lineage/clade name AY.122 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434019 SAMN23961843 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120238031/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.5 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434020 SAMN23961823 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120282408/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 3 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.65 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434021 SAMN23961822 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120284072/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.61 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434022 SAMN23961821 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120285118/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.92 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434023 SAMN23961820 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120286984/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.08 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434024 SAMN23961838 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120256513/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.5 lineage/clade name AY.107 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434025 SAMN23961837 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120260466/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 29.68 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434026 SAMN23961817 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120291136/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 6 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.67 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434027 SAMN23961816 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120294384/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.61 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434028 SAMN23961815 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120294746/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.37 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434029 SAMN23961741 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120375709/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.03 lineage/clade name AY.116 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434030 SAMN23961740 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120377667/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.65 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434031 SAMN23961739 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120378751/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.69 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434032 SAMN23961738 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120379760/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.05 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434033 SAMN23961737 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120379798/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.52 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434034 SAMN23961736 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120380267/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.7 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434035 SAMN23961735 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120382018/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.57 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434036 SAMN23961734 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120382923/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 59 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.67 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434037 SAMN23961733 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120383676/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.21 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434038 SAMN23961732 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120384673/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 3 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.41 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434039 SAMN23961731 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120385284/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 3 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.05 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434040 SAMN23961730 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120389592/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 63 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.55 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434041 SAMN23961752 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120362375/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.85 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434042 SAMN23961751 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120364901/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 69 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.23 lineage/clade name AY.42 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434043 SAMN23961750 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120365026/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.01 lineage/clade name AY.47 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434044 SAMN23961726 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120390734/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.79 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434045 SAMN23961727 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120390655/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.66 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434046 SAMN23961724 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120395903/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.53 lineage/clade name AY.122 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434047 SAMN23961725 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120393286/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.98 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434048 SAMN23961722 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120399210/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.32 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434049 SAMN23961723 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120396319/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.48 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434050 SAMN23961721 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120399321/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.35 lineage/clade name AY.118 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434051 SAMN23961720 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120402853/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.17 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434052 SAMN23961719 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120406267/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.75 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434053 SAMN23961718 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120407869/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasopharyngeal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 9 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.92 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434054 SAMN23961717 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120408970/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.85 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434055 SAMN23961716 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120409210/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.19 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434056 SAMN23961715 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120409684/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.51 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434057 SAMN23961714 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120410738/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.19 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434058 SAMN23961713 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120412053/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Unknown diagnostic_pcr_Ct_value_1 Unknown lineage/clade name AY.110 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434059 SAMN23961712 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120414924/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.13 lineage/clade name AY.118 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434060 SAMN23961711 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120416378/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.99 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434061 SAMN23961710 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120418878/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.84 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434062 SAMN23961709 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120422283/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.84 lineage/clade name AY.118 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434063 SAMN23961708 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120422830/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.11 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434064 SAMN23961729 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120389807/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.76 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434065 SAMN23962123 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112245997/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.37 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434066 SAMN23962122 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112248229/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 28.53 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434067 SAMN23962121 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112255300/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.76 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434068 SAMN23962120 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112257290/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.84 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434069 SAMN23962118 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112262365/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.98 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434070 SAMN23962119 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112261153/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.43 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434071 SAMN23962117 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112264447/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.8 lineage/clade name AY.54 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434072 SAMN23962116 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112275545/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.43 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434073 SAMN23962115 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112276884/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.73 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434074 SAMN23962114 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112284814/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.53 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434075 SAMN23962113 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112288550/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 77 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.84 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434076 SAMN23962134 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112220516/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.85 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434077 SAMN23962133 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112221016/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.88 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434078 SAMN23962132 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112222401/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 9 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.12 lineage/clade name AY.119 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434079 SAMN23962112 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112289623/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 10 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.25 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434080 SAMN23962109 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112299154/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.07 lineage/clade name AY.46.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434081 SAMN23962108 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112302737/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 14.55 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434082 SAMN23962107 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112306915/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 14.97 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434083 SAMN23962106 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112307769/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 14.56 lineage/clade name AY.122 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434084 SAMN23962105 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112309396/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.94 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434085 SAMN23962103 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112310238/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 72 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.05 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434086 SAMN23962104 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112309867/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 27.1 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434087 SAMN23962102 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112311839/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 1 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.73 lineage/clade name AY.92 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434088 SAMN23962101 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112314174/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.73 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434089 SAMN23962100 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112314433/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.98 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434090 SAMN23962099 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112316163/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.04 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434091 SAMN23962098 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112325221/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.28 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434092 SAMN23962097 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112328884/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.15 lineage/clade name AY.122 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434093 SAMN23962096 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112329150/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.19 lineage/clade name AY.122 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434094 SAMN23962095 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112331257/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.67 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434095 SAMN23962093 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112333529/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 66 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.05 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434096 SAMN23962094 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112332515/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.76 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434097 SAMN23962091 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112338545/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.48 lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434098 SAMN23962092 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112338210/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 66 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.93 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434099 SAMN23962090 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112344791/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 9 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.37 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434100 SAMN23962111 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112293654/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.56 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434101 SAMN23961980 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120111155/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.89 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434102 SAMN23961981 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120110783/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.57 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434103 SAMN23961978 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120113431/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 2 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.97 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434104 SAMN23961979 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120113234/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.42 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434105 SAMN23961999 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120100293/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.4 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434106 SAMN23961977 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120114343/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.42 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434107 SAMN23961998 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120100663/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.98 lineage/clade name AY.119 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434108 SAMN23961997 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120100756/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.96 lineage/clade name AY.46.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434109 SAMN23961974 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120115413/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.37 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434110 SAMN23961973 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120115774/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.42 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434111 SAMN23961972 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120116295/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.3 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434112 SAMN23961970 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120118707/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 29.82 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434113 SAMN23961971 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120117866/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.84 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434114 SAMN23961969 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120119548/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.69 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434115 SAMN23961968 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120121426/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 61 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.69 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434116 SAMN23961967 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120122754/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 27.09 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434117 SAMN23961966 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120123101/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434118 SAMN23961965 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120123124/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.09 lineage/clade name AY.118 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434119 SAMN23961964 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120123947/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 9 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.08 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434120 SAMN23961963 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120125303/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.34 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434121 SAMN23961962 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120125768/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.28 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434122 SAMN23961961 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120126639/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.33 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434123 SAMN23961960 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120128692/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.6 lineage/clade name AY.39 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434124 SAMN23961937 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120149816/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.74 lineage/clade name AY.43 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434125 SAMN23961959 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120132394/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.45 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434126 SAMN23961958 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120132594/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.33 lineage/clade name AY.118 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434127 SAMN23961957 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120133105/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.22 lineage/clade name AY.36 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434128 SAMN23961956 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120134091/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.87 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434129 SAMN23961955 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120135141/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source Nasal swab AN geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 40 host_race Other Race collection_device Nasal swab AN collection_method Nasal swab AN purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Unknown diagnostic_pcr_Ct_value_1 Unknown lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434130 SAMN23961976 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120114815/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.73 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434131 SAMN23961975 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120114849/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.99 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434132 SAMN23961951 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120137629/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.16 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434133 SAMN23961950 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120138926/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.93 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434134 SAMN23961949 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120139608/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434135 SAMN23961948 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120140912/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.79 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434136 SAMN23961915 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120165298/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.47 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434137 SAMN23961914 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120165582/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 11.87 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434138 SAMN23961913 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120165687/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.95 lineage/clade name AY.34 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434139 SAMN23961912 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120167467/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 32.76 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434140 SAMN23961911 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120168293/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 87 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Unknown diagnostic_pcr_Ct_value_1 Unknown lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434141 SAMN23961910 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120169184/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.88 lineage/clade name AY.122 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434142 SAMN23961931 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120153382/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.8 lineage/clade name AY.39 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434143 SAMN23961930 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120154690/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.75 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434144 SAMN23961929 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120156492/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.48 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434145 SAMN23961906 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120171349/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.27 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434146 SAMN23961905 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120171808/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.53 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434147 SAMN23961901 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120176052/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.48 lineage/clade name AY.106 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434148 SAMN23961900 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120176097/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.92 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434149 SAMN23961899 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120177459/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.06 lineage/clade name AY.119 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434150 SAMN23961898 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120177716/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.85 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434151 SAMN23961897 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120177734/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 73 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.43 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434152 SAMN23961896 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120177831/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.66 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434153 SAMN23961895 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120178196/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.96 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434154 SAMN23961894 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120179266/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 27.95 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434155 SAMN23961893 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120180817/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.66 lineage/clade name AY.98.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434156 SAMN23961892 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120182256/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.97 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434157 SAMN23961891 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120184879/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.2 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434158 SAMN23961890 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120185094/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 27.84 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434159 SAMN23961889 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120185593/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 28.08 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434160 SAMN23961888 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120185667/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.92 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434161 SAMN23961887 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120185689/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.41 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434162 SAMN23961886 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120185795/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 69 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.14 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434163 SAMN23961885 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120185808/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.37 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434164 SAMN23961909 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120169680/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.73 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434165 SAMN23961908 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120169798/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.1 lineage/clade name AY.36 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434166 SAMN23961907 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120171321/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.51 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434167 SAMN23961881 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120187695/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.37 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434168 SAMN23961880 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120188283/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.2 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434169 SAMN23961813 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120296786/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.99 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434170 SAMN23961814 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120295095/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 58 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.66 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434171 SAMN23961812 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120299098/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 7 host_race Native Hawaiian or Other Pacific Islander collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.24 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434172 SAMN23961811 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120302541/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 7 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.16 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434173 SAMN23961810 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120305157/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.82 lineage/clade name AY.122 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434174 SAMN23961809 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120305958/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.65 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434175 SAMN23961808 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120307096/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.65 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434176 SAMN23961807 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120307170/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.16 lineage/clade name AY.122 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434177 SAMN23961806 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120307245/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.81 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434178 SAMN23961805 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120307431/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 6 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.9 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434179 SAMN23961804 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120308670/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.98 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434180 SAMN23961803 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120308830/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 7 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.4 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434181 SAMN23961802 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120310065/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 54 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.66 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434182 SAMN23961801 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120311004/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.32 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434183 SAMN23961800 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120311480/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.08 lineage/clade name AY.118 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434184 SAMN23961799 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120313462/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.08 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434185 SAMN23961798 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120313491/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.6 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434186 SAMN23961819 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120288073/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.67 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434187 SAMN23961818 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120288688/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.67 lineage/clade name AY.122 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434188 SAMN23961794 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120316904/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.58 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434189 SAMN23961793 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120317901/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.81 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434190 SAMN23961792 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120319167/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.22 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434191 SAMN23961790 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120322099/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.8 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434192 SAMN23961791 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120320301/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 62 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.08 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434193 SAMN23961789 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120322753/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.09 lineage/clade name AY.47 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434194 SAMN23961787 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120323161/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.05 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434195 SAMN23961788 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120322813/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.76 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434196 SAMN23961786 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120323488/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.42 lineage/clade name AY.116 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434197 SAMN23961784 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120325478/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.82 lineage/clade name AY.46.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434198 SAMN23961785 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120323494/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.31 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434199 SAMN23961783 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120326925/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.7 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434200 SAMN23961781 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120328788/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.09 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434201 SAMN23961782 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120328683/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 3 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.74 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434202 SAMN23961780 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120328932/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.41 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434203 SAMN23961778 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120330149/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 63 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.18 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434204 SAMN23961779 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120328935/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race Other Race collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.78 lineage/clade name AY.121 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434205 SAMN23962234 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111216879/2021 collected_by UW Virology Lab collection_date 2021-11-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 56 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 14.88 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434206 SAMN23962233 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111296966/2021 collected_by UW Virology Lab collection_date 2021-11-12 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 0 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.46 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434207 SAMN23962232 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111362354/2021 collected_by UW Virology Lab collection_date 2021-11-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.73 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434208 SAMN23962231 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111404423/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.01 lineage/clade name AY.122 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434209 SAMN23962230 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111406654/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.68 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434210 SAMN23962229 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111407887/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.81 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434211 SAMN23962228 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111409519/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.26 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434212 SAMN23962226 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111412656/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 72 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.68 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434213 SAMN23962227 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111412391/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.7 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434214 SAMN23962225 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111414011/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 76 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.36 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434215 SAMN23962223 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111415700/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.39 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434216 SAMN23962224 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111415290/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.24 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434217 SAMN23962222 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111420450/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.09 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434218 SAMN23962220 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111427966/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.57 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434219 SAMN23962221 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111426024/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.08 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434220 SAMN23962219 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111430406/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.1 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434221 SAMN23962218 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111430711/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.76 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434222 SAMN23962217 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111431283/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 83 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.99 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434223 SAMN23962216 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111433144/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.88 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434224 SAMN23962215 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111435517/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 54 host_race American Indian or Alaska Native collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.28 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434225 SAMN23962214 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111443738/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.79 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434226 SAMN23962213 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111447788/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.04 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434227 SAMN23962212 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111450796/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.98 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434228 SAMN23962211 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111454169/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.53 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434229 SAMN23962210 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111456674/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.73 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434230 SAMN23962208 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111460161/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.45 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434231 SAMN23962209 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111456869/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.08 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434232 SAMN23962207 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111468175/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.92 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434233 SAMN23962205 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111478936/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.06 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434234 SAMN23962206 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111474807/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race American Indian or Alaska Native collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.78 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434235 SAMN23962204 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111482961/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.67 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434236 SAMN23962203 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111485031/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.85 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434237 SAMN23962202 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111486082/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.76 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434238 SAMN23962201 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111492431/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.2 lineage/clade name AY.92 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434239 SAMN23962200 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111494667/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 10 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.37 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434240 SAMN23962199 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111498117/2021 collected_by UW Virology Lab collection_date 2021-11-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.19 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434241 SAMN23962052 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112641727/2021 collected_by UW Virology Lab collection_date 2021-11-26 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.36 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434242 SAMN23962051 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112647826/2021 collected_by UW Virology Lab collection_date 2021-11-26 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 7 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.37 lineage/clade name AY.119 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434243 SAMN23962050 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112674759/2021 collected_by UW Virology Lab collection_date 2021-11-26 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.11 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434244 SAMN23962049 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112682285/2021 collected_by UW Virology Lab collection_date 2021-11-26 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.94 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434245 SAMN23962048 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112692902/2021 collected_by UW Virology Lab collection_date 2021-11-26 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.38 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434246 SAMN23962047 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112695716/2021 collected_by UW Virology Lab collection_date 2021-11-26 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.79 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434247 SAMN23962046 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112696228/2021 collected_by UW Virology Lab collection_date 2021-11-26 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.22 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434248 SAMN23962045 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112926269/2021 collected_by UW Virology Lab collection_date 2021-11-29 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.3 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434249 SAMN23962066 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112386412/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.96 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434250 SAMN23962065 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112387830/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 56 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.03 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434251 SAMN23962041 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113001595/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.71 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434252 SAMN23962040 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113001903/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.67 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434253 SAMN23962039 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113004681/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 66 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.01 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434254 SAMN23962038 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113004972/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.65 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434255 SAMN23962037 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113010180/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.14 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434256 SAMN23962036 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113011898/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.33 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434257 SAMN23962035 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113013245/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.67 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434258 SAMN23962034 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113014251/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.3 lineage/clade name AY.124 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434259 SAMN23962033 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113022416/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.48 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434260 SAMN23962032 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113027603/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 55 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.51 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434261 SAMN23962031 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113031940/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.69 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434262 SAMN23962030 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113032110/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.57 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434263 SAMN23962029 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113034391/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.31 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434264 SAMN23962028 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113039021/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.19 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434265 SAMN23962027 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113039032/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.96 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434266 SAMN23962026 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113040050/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasopharyngeal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.99 lineage/clade name AY.122 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434267 SAMN23962025 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113046099/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.18 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434268 SAMN23962024 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113047012/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.06 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434269 SAMN23962023 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113047557/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 58 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.55 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434270 SAMN23962022 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113047793/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 10 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.12 lineage/clade name AY.119 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434271 SAMN23962044 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112949736/2021 collected_by UW Virology Lab collection_date 2021-11-29 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.41 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434272 SAMN23962043 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112995510/2021 collected_by UW Virology Lab collection_date 2021-11-29 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.03 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434273 SAMN23962042 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113000818/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.13 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434274 SAMN23962019 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113053976/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.51 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434275 SAMN23962018 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113060519/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.21 lineage/clade name AY.113 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434276 SAMN23962017 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113063522/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 9 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.87 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434277 SAMN23962198 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111504449/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.33 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434278 SAMN23962197 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111507473/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 3 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.92 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434279 SAMN23962195 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111515472/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 6 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.18 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434280 SAMN23962196 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111509800/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 63 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.59 lineage/clade name AY.119 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434281 SAMN23962194 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111518932/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 63 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.86 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434282 SAMN23962193 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111520024/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.05 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434283 SAMN23962192 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111520889/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.96 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434284 SAMN23962177 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111547356/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.89 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434285 SAMN23962178 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111546930/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 4 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.97 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434286 SAMN23962179 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111546331/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.85 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434287 SAMN23962182 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111538592/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.76 lineage/clade name AY.122 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434288 SAMN23962183 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111538225/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.38 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434289 SAMN23962184 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111538133/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.46 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434290 SAMN23962185 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111537321/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 65 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.18 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434291 SAMN23962186 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111536489/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.85 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434292 SAMN23962187 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111532519/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 71 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.81 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434293 SAMN23962188 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111532425/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race American Indian or Alaska Native collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.85 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434294 SAMN23962189 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111530084/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race American Indian or Alaska Native collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.65 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434295 SAMN23962190 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111521578/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 71 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.2 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434296 SAMN23962191 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111521567/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 11 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.22 lineage/clade name AY.122 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434297 SAMN23962167 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111559906/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.93 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434298 SAMN23962168 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111559703/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 6 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.41 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434299 SAMN23962169 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111558842/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.69 lineage/clade name AY.125 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434300 SAMN23962170 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111558041/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.88 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434301 SAMN23962171 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111557908/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.98 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434302 SAMN23962172 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111555365/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.17 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434303 SAMN23962173 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111551238/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.67 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434304 SAMN23962174 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111549764/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 27.31 lineage/clade name AY.116 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434305 SAMN23962175 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111549091/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.17 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434306 SAMN23962176 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111548479/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.21 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434307 SAMN23962166 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111561934/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 4 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.75 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434308 SAMN23962165 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111563532/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.94 lineage/clade name AY.124 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434309 SAMN23962164 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111564487/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.27 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434310 SAMN23962180 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111543637/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.1 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434311 SAMN23962181 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111540138/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.88 lineage/clade name AY.119 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434312 SAMN23962163 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111568320/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 7 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.54 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434313 SAMN23962110 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112294352/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.12 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434314 SAMN23962086 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112348900/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.8 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434315 SAMN23962085 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112350088/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 4 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.36 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434316 SAMN23962084 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112354581/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.41 lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434317 SAMN23962083 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112356889/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.04 lineage/clade name AY.107 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434318 SAMN23962082 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112357859/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 13.73 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434319 SAMN23962081 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112363652/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.12 lineage/clade name AY.122 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434320 SAMN23962080 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112363822/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.04 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434321 SAMN23962079 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112366752/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434322 SAMN23962078 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112366788/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race American Indian or Alaska Native collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.51 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434323 SAMN23962077 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112370195/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 58 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.22 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434324 SAMN23962076 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112373257/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.42 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434325 SAMN23962075 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112376501/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.57 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434326 SAMN23962073 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112377772/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 29.62 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434327 SAMN23962074 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112377282/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.82 lineage/clade name AY.122 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434328 SAMN23962072 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112382802/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434329 SAMN23962071 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112383533/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.45 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434330 SAMN23962070 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112384235/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.66 lineage/clade name AY.13 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434331 SAMN23962069 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112384275/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.96 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434332 SAMN23962068 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112385679/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.66 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434333 SAMN23962067 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112386098/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.18 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434334 SAMN23962089 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112347306/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.23 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434335 SAMN23962088 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112347610/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.87 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434336 SAMN23962087 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112348656/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.77 lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434337 SAMN23962064 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112391282/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.92 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434338 SAMN23962063 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112394816/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 27.8 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434339 SAMN23962062 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112397025/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.22 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434340 SAMN23962061 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112398199/2021 collected_by UW Virology Lab collection_date 2021-11-23 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.31 lineage/clade name AY.119 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434341 SAMN23962060 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112606286/2021 collected_by UW Virology Lab collection_date 2021-11-26 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.12 lineage/clade name AY.116 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434342 SAMN23962059 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112608211/2021 collected_by UW Virology Lab collection_date 2021-11-26 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 7 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.4 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434343 SAMN23962058 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112616631/2021 collected_by UW Virology Lab collection_date 2021-11-26 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 86 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.45 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434344 SAMN23962057 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112616745/2021 collected_by UW Virology Lab collection_date 2021-11-26 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.38 lineage/clade name AY.9.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434345 SAMN23962056 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112621390/2021 collected_by UW Virology Lab collection_date 2021-11-26 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.46 lineage/clade name AY.119 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434346 SAMN23962055 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112628520/2021 collected_by UW Virology Lab collection_date 2021-11-26 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.81 lineage/clade name AY.39 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434347 SAMN23962054 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112638965/2021 collected_by UW Virology Lab collection_date 2021-11-26 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.59 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434348 SAMN23962053 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112640895/2021 collected_by UW Virology Lab collection_date 2021-11-26 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.7 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434349 SAMN23961879 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120191340/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.83 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434350 SAMN23961878 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120191487/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.86 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434351 SAMN23961877 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120192251/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.05 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434352 SAMN23961876 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120193120/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.35 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434353 SAMN23961875 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120195171/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 10 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.63 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434354 SAMN23961873 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120196290/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.01 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434355 SAMN23961872 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120198152/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.25 lineage/clade name AY.9.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434356 SAMN23961874 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120195767/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.22 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434357 SAMN23961870 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120200090/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.61 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434358 SAMN23961871 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120199367/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.53 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434359 SAMN23961869 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120200416/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.51 lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434360 SAMN23961868 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120202818/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 32.91 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434361 SAMN23961866 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120208493/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.64 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434362 SAMN23961867 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120205945/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.75 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434363 SAMN23961865 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120211668/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.22 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434364 SAMN23961864 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120211676/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.96 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434365 SAMN23961863 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120212105/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.74 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434366 SAMN23961884 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120186585/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.29 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434367 SAMN23961862 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120212604/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.14 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434368 SAMN23961883 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120186707/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.01 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434369 SAMN23961882 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120187642/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.15 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434370 SAMN23961859 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120216854/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.57 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434371 SAMN23961858 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120221077/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.4 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434372 SAMN23961857 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120224937/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 4 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 32.07 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434373 SAMN23961856 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120225026/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.8 lineage/clade name AY.43 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434374 SAMN23961855 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120225890/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434375 SAMN23961854 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120226198/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.11 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434376 SAMN23961853 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120228405/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.61 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434377 SAMN23961852 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120228471/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 62 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 14.64 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434378 SAMN23961851 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120229231/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.6 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434379 SAMN23961850 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120229949/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.51 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434380 SAMN23961849 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120230235/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 9 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.29 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434381 SAMN23961848 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120230603/2021 collected_by UW Virology Lab collection_date 2021-12-02 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.51 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434382 SAMN23961777 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120330331/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.65 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434383 SAMN23961776 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120331723/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.62 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434384 SAMN23961775 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120332227/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 67 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.77 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434385 SAMN23961797 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120315113/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.65 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434386 SAMN23961796 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120315246/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.82 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434387 SAMN23961795 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120315485/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.67 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434388 SAMN23961772 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120336767/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.85 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434389 SAMN23961771 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120337384/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.65 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434390 SAMN23961770 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120341122/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.02 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434391 SAMN23961769 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120343446/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.93 lineage/clade name AY.36 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434392 SAMN23961768 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120343479/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.13 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434393 SAMN23961767 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120344726/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 63 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.51 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434394 SAMN23961766 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120347024/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 6 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.09 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434395 SAMN23961765 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120347278/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race American Indian or Alaska Native collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.95 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434396 SAMN23961764 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120347572/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.25 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434397 SAMN23961763 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120347799/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.75 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434398 SAMN23961762 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120351735/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.5 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434399 SAMN23961761 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120351872/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 14.36 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434400 SAMN23961760 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120352324/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.18 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434401 SAMN23961759 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120356153/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 56 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.11 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434402 SAMN23961758 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120359425/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.46 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434403 SAMN23961756 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120361178/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.42 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434404 SAMN23961757 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120359778/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.45 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434405 SAMN23961755 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120361261/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.08 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434406 SAMN23961754 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120362174/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 13.33 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434407 SAMN23961753 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120362228/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 7 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.59 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434408 SAMN23961774 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120332723/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.06 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434409 SAMN23961773 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120336249/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Asian collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.26 lineage/clade name AY.47 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434410 SAMN23961749 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120369676/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.34 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434411 SAMN23961748 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120369976/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.9 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434412 SAMN23961746 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120372552/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.85 lineage/clade name AY.122 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434413 SAMN23961747 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120370497/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.39 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434414 SAMN23961745 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120372822/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.86 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434415 SAMN23961744 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120373359/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.38 lineage/clade name AY.116 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434416 SAMN23961743 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120374113/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.37 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434417 SAMN23961742 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120375273/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.19 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434418 SAMN23961728 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120389971/2021 collected_by UW Virology Lab collection_date 2021-12-03 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.46 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434419 SAMN23961704 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120431483/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.04 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434420 SAMN23961703 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120434661/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 1 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.43 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434421 SAMN23961702 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120450461/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 47 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.92 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434422 SAMN23961701 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120452620/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.85 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434423 SAMN23961700 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120452869/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.39 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434424 SAMN23961699 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120457473/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.35 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434425 SAMN23961698 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120457547/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.18 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434426 SAMN23961697 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120457647/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.49 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434427 SAMN23961696 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120459759/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.3 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434428 SAMN23961695 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120459924/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.25 lineage/clade name AY.84 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434429 SAMN23961694 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120465241/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 3 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.35 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434430 SAMN23961693 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120470774/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.56 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434431 SAMN23961692 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120472785/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 7 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.44 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434432 SAMN23961691 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120474342/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.1 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434433 SAMN23961690 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120475378/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 11 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.7 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434434 SAMN23961689 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120478839/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.13 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434435 SAMN23961688 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120479068/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.33 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434436 SAMN23961687 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120479103/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.98 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434437 SAMN23961686 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120480128/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.47 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434438 SAMN23961685 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120484833/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.31 lineage/clade name AY.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434439 SAMN23961707 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120426484/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.9 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434440 SAMN23961706 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120428182/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.22 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434441 SAMN23961705 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120430388/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nares geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 84 host_race White collection_device Nares collection_method Nares purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.63 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434442 SAMN23961682 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120489109/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 67 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.3 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434443 SAMN23961681 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120492265/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.3 lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434444 SAMN23961680 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120493640/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.07 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434445 SAMN23961679 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120493721/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.51 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434446 SAMN23961678 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120494079/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.17 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434447 SAMN23961677 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120495601/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.87 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434448 SAMN23961676 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120495643/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 59 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.08 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434449 SAMN23961674 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120560322/2021 collected_by UW Virology Lab collection_date 2021-12-05 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.65 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434450 SAMN23961675 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120495979/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.22 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434451 SAMN23961673 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120582361/2021 collected_by UW Virology Lab collection_date 2021-12-05 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.16 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434452 SAMN24167481 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120612536/2021 collected_by UW Virology Lab collection_date 2021-12-06 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.92 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434453 SAMN24167479 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120651352/2021 collected_by UW Virology Lab collection_date 2021-12-06 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.42 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434454 SAMN24167478 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120662939/2021 collected_by UW Virology Lab collection_date 2021-12-06 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.44 lineage/clade name BA.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434455 SAMN23961684 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120486220/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.03 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434456 SAMN23961683 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120488197/2021 collected_by UW Virology Lab collection_date 2021-12-04 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434457 SAMN23962161 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111572195/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434458 SAMN23962162 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111569214/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.38 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434459 SAMN23962159 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111582349/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.03 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434460 SAMN23962160 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111579240/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.01 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434461 SAMN23962158 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111585708/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 12.8 lineage/clade name AY.36 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434462 SAMN23962157 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111587475/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.21 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434463 SAMN23962153 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111590860/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 1 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.01 lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434464 SAMN23962152 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111595618/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.5 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434465 SAMN23962151 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111598955/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.62 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434466 SAMN23962150 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111599582/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 14.73 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434467 SAMN23962149 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112017906/2021 collected_by UW Virology Lab collection_date 2021-11-20 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.24 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434468 SAMN23962148 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112019996/2021 collected_by UW Virology Lab collection_date 2021-11-20 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 56 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.43 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434469 SAMN23962147 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112038613/2021 collected_by UW Virology Lab collection_date 2021-11-20 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.48 lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434470 SAMN23962146 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112038833/2021 collected_by UW Virology Lab collection_date 2021-11-20 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.65 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434471 SAMN23962145 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112046414/2021 collected_by UW Virology Lab collection_date 2021-11-20 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.1 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434472 SAMN23962144 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112081635/2021 collected_by UW Virology Lab collection_date 2021-11-20 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.14 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434473 SAMN23962142 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112087232/2021 collected_by UW Virology Lab collection_date 2021-11-20 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.36 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434474 SAMN23962143 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112085958/2021 collected_by UW Virology Lab collection_date 2021-11-20 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.67 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434475 SAMN23962141 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112091909/2021 collected_by UW Virology Lab collection_date 2021-11-20 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.4 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434476 SAMN23962140 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112200045/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 13.67 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434477 SAMN23962139 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112200917/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.76 lineage/clade name AY.47 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434478 SAMN23962138 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112202020/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 66 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.22 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434479 SAMN23962137 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112202320/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.3 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434480 SAMN23962136 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112202426/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.94 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434481 SAMN23962156 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111588353/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.31 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434482 SAMN23962135 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112213498/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.38 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434483 SAMN23962155 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111588762/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.18 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434484 SAMN23962154 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21111589482/2021 collected_by UW Virology Lab collection_date 2021-11-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.19 lineage/clade name AY.113 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434485 SAMN23962131 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112223805/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 2 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.63 lineage/clade name AY.119 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434486 SAMN23962130 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112225555/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.18 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434487 SAMN23962129 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112226785/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 27.64 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434488 SAMN23962128 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112227529/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 27.54 lineage/clade name AY.39 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434489 SAMN23962127 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112233454/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 7 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 28.01 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434490 SAMN23962126 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112239951/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.57 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434491 SAMN23962125 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112243007/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.99 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434492 SAMN23962124 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21112245138/2021 collected_by UW Virology Lab collection_date 2021-11-22 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.65 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434493 SAMN23962015 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113064178/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.29 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434494 SAMN23962016 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113063762/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.96 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434495 SAMN23962014 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113069214/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.89 lineage/clade name AY.119 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434496 SAMN23962013 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113070499/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race Native Hawaiian or Other Pacific Islander collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.93 lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434497 SAMN23962011 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113080506/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.47 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434498 SAMN23962012 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113078726/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 9 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.09 lineage/clade name AY.47 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434499 SAMN23962010 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113085375/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 67 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.92 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434500 SAMN23962009 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113087859/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.16 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434501 SAMN23962008 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113088966/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.91 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434502 SAMN23962007 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113092540/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 63 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.88 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434503 SAMN23962006 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113094602/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race Native Hawaiian or Other Pacific Islander collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.52 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434504 SAMN23962005 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113094644/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 72 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.27 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434505 SAMN23962004 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113095527/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.62 lineage/clade name AY.119 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434506 SAMN23962003 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113096825/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.65 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434507 SAMN23962002 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113097983/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 4 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.83 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434508 SAMN23962001 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113098839/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.28 lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434509 SAMN23962000 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120100259/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.3 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434510 SAMN23962021 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113051665/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.93 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434511 SAMN23962020 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21113051744/2021 collected_by UW Virology Lab collection_date 2021-11-30 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.91 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434512 SAMN23961996 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120101306/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.06 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434513 SAMN23961995 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120102872/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 2 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.75 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434514 SAMN23961994 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120103254/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.77 lineage/clade name AY.100 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434515 SAMN23961993 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120103320/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.56 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434516 SAMN23961992 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120103384/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 9 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.65 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434517 SAMN23961991 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120104707/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 6 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.51 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434518 SAMN23961990 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120104890/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.58 lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434519 SAMN23961989 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120106105/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.5 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434520 SAMN23961988 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120106630/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.02 lineage/clade name AY.119 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434521 SAMN23961987 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120107194/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.98 lineage/clade name AY.46.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434522 SAMN23961986 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120108008/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.67 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434523 SAMN23961985 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120109760/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.34 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434524 SAMN23961984 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120110325/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 29.75 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434525 SAMN23961983 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120110515/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.91 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434526 SAMN23961982 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120110723/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.23 lineage/clade name AY.47 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434527 SAMN23961947 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120142526/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.92 lineage/clade name AY.39 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434528 SAMN23961946 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120142536/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.88 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434529 SAMN23961945 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120143528/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.39 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434530 SAMN23961944 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120143671/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.83 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434531 SAMN23961943 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120143900/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434532 SAMN23961942 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120144742/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.08 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434533 SAMN23961941 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120144996/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 1 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.47 lineage/clade name AY.114 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434534 SAMN23961940 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120146633/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.53 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434535 SAMN23961939 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120147392/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 28.7 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434536 SAMN23961938 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120148673/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 64 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.33 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434537 SAMN23961936 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120149929/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.37 lineage/clade name AY.103 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434538 SAMN23961935 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120150381/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.58 lineage/clade name AY.117 BioSampleModel SARS-CoV-2: clinical or host-associated SRS15434539 SAMN23961934 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21120150500/2021 collected_by UW Virology Lab collection_date 2021-12-01 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.73 lineage/clade name AY.44 BioSampleModel SARS-CoV-2: clinical or host-associated