SRS15439434 SAMN31274635 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-21 geo_loc_name USA: Colorado, La Plata, county isolation_source wastewater collection_site_id PR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 1786.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id PR20220421 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439435 SAMN31274634 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Larimer Weld, county isolation_source wastewater collection_site_id LC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.122 instantaneous_flow NaN ww_population 7946.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 40727.13121 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id LC20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439436 SAMN31274633 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id LB project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 9292.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id LB20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439437 SAMN31274632 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id LA project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 4.11 instantaneous_flow NaN ww_population 66429.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 115653.89300000001 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id LA20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439438 SAMN31274631 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Denver Arapahoe, county isolation_source wastewater collection_site_id SR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 17.0 instantaneous_flow NaN ww_population 247443.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 236032.8382 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SR20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439439 SAMN31274630 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SQ project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 3.53 instantaneous_flow NaN ww_population 23194.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 225681.7919 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SQ20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439440 SAMN31274629 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Adams, county isolation_source wastewater collection_site_id SP project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 3.69 instantaneous_flow NaN ww_population 54561.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 128648.3293 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SP20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439441 SAMN31274539 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Boulder, county isolation_source wastewater collection_site_id SL project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.5762 instantaneous_flow NaN ww_population 17601.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 115559.9603 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SL20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439442 SAMN31274530 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Boulder, county isolation_source wastewater collection_site_id SB project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 10.34 instantaneous_flow NaN ww_population 89383.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 229928.9592 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SB20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439443 SAMN31274529 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Adams Arapahoe, county isolation_source wastewater collection_site_id SA project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 5.0019 instantaneous_flow NaN ww_population 268004.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 123574.0927 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SA20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439444 SAMN31274541 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Denver, county isolation_source wastewater collection_site_id SN project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 55.0 instantaneous_flow NaN ww_population 709904.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 130230.5284 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SN20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439445 SAMN31274648 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Douglas, county isolation_source wastewater collection_site_id PC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 5.507000000000001 instantaneous_flow NaN ww_population 34786.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 174000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id PC20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439446 SAMN31274647 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Ouray, county isolation_source wastewater collection_site_id OU project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow NaN ww_population 2152.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type grab ww_sample_duration 0 concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 19400.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id OU20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439447 SAMN31274646 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Garfield, county isolation_source wastewater collection_site_id GS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.095 instantaneous_flow NaN ww_population 16714.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 80500.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id GS20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439448 SAMN31274645 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Gunnison, county isolation_source wastewater collection_site_id GN project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.68 instantaneous_flow NaN ww_population 30000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 47700.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id GN20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439449 SAMN31274644 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Mesa, county isolation_source wastewater collection_site_id GJ project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 8.88 instantaneous_flow NaN ww_population 89286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 219000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id GJ20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439450 SAMN31274643 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id FC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.49700000000000005 instantaneous_flow NaN ww_population 14286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 22500.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id FC20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439451 SAMN31274642 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Eagle, county isolation_source wastewater collection_site_id ED project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.765 instantaneous_flow NaN ww_population 21071.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 101000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id ED20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439452 SAMN31274641 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id CM project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.08800000000000001 instantaneous_flow NaN ww_population 7857.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 57600.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id CM20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439453 SAMN31274640 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Adams, county isolation_source wastewater collection_site_id BT project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.4 instantaneous_flow NaN ww_population 21429.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 40000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id BT20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439454 SAMN31274639 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-29 geo_loc_name USA: Colorado, Weld, county isolation_source wastewater collection_site_id WS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.7169999999999999 instantaneous_flow NaN ww_population 20000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 120000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id WS20220429 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439455 SAMN31274540 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Denver, county isolation_source wastewater collection_site_id SM project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 26.7 instantaneous_flow NaN ww_population 345454.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 48581.774639999996 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SM20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439456 SAMN31274638 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Routt, county isolation_source wastewater collection_site_id SS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant instantaneous_flow NaN ww_population 43741.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 115000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SS20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439457 SAMN31274637 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-27 geo_loc_name USA: Colorado, Mesa, county isolation_source wastewater collection_site_id GJ project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 7.23 instantaneous_flow NaN ww_population 89286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 22800.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id GJ20220427 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439458 SAMN31274636 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-24 geo_loc_name USA: Colorado, San Miguel, county isolation_source wastewater collection_site_id TR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.624 instantaneous_flow NaN ww_population 15000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 97000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id TR20220424 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439459 SAMN31274671 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, Boulder Weld, county isolation_source wastewater collection_site_id SK project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 6.91 instantaneous_flow NaN ww_population 75544.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 195130.5073 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SK20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439460 SAMN31274649 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, La Plata, county isolation_source wastewater collection_site_id PR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 1786.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id PR20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439461 SAMN31274650 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Routt, county isolation_source wastewater collection_site_id SS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 3.42 instantaneous_flow NaN ww_population 43741.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 37100.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SS20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439462 SAMN31274651 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, La Plata, county isolation_source wastewater collection_site_id ST project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.646 instantaneous_flow NaN ww_population 23429.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 95900.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id ST20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439463 SAMN31274652 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Las Animas, county isolation_source wastewater collection_site_id TD project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow NaN instantaneous_flow 1.14 ww_population 14286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type grab ww_sample_duration 0 concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 41000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id TD20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439464 SAMN31274653 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, San Miguel, county isolation_source wastewater collection_site_id TR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.6759999999999999 instantaneous_flow NaN ww_population 15000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 42300.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id TR20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439465 SAMN31274654 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id UB project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.58 instantaneous_flow NaN ww_population 35643.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 84300.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id UB20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439466 SAMN31274655 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id UTEP project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant instantaneous_flow NaN ww_population 5818.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 108000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id UTEP20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439467 SAMN31274542 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Pueblo, county isolation_source wastewater collection_site_id SO project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 10.113999999999999 instantaneous_flow NaN ww_population 96515.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 45470.500810000005 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SO20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439468 SAMN31274659 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-03 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id KS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.6678 instantaneous_flow NaN ww_population 18571.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 58800.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id KS20220503 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439469 SAMN31274660 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-03 geo_loc_name USA: Colorado, Boulder, county isolation_source wastewater collection_site_id NL project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.086 instantaneous_flow NaN ww_population 1786.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 679000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id NL20220503 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439470 SAMN31274661 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-03 geo_loc_name USA: Colorado, Archuleta, county isolation_source wastewater collection_site_id PG project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.9993 instantaneous_flow NaN ww_population 27857.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 827.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id PG20220503 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439471 SAMN31274662 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, Adams Arapahoe, county isolation_source wastewater collection_site_id SA project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 4.0253 instantaneous_flow NaN ww_population 268004.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 323666.2343 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SA20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439472 SAMN31274663 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, Boulder, county isolation_source wastewater collection_site_id SB project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 12.21 instantaneous_flow NaN ww_population 89383.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 252995.0119 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SB20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439473 SAMN31274664 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, Broomfield, county isolation_source wastewater collection_site_id SC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 6.104 instantaneous_flow NaN ww_population 53356.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 427969.0818 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SC20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439474 SAMN31274685 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Morgan, county isolation_source wastewater collection_site_id BH project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.659 instantaneous_flow NaN ww_population 12000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 25500.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id BH20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439475 SAMN31274665 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, El Paso, county isolation_source wastewater collection_site_id SD project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 8.79 instantaneous_flow NaN ww_population 102204.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 391784.5032 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SD20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439476 SAMN31274666 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, El Paso, county isolation_source wastewater collection_site_id SE project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 27.46 instantaneous_flow NaN ww_population 303855.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 205212.6062 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SE20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439477 SAMN31274667 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SG project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 2.055 instantaneous_flow NaN ww_population 17997.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 132538.1641 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SG20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439478 SAMN31274668 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SH project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 92127.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SH20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439479 SAMN31274543 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Adams, county isolation_source wastewater collection_site_id SP project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 3.81 instantaneous_flow NaN ww_population 54561.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 101044.2019 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SP20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439480 SAMN31274691 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id FC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.5135 instantaneous_flow NaN ww_population 14286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 51800.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id FC20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439481 SAMN31274669 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SI project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 26621.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SI20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439482 SAMN31274695 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id KS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.6355 instantaneous_flow NaN ww_population 18571.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 52600.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id KS20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439483 SAMN31274697 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Ouray, county isolation_source wastewater collection_site_id OU project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow NaN ww_population 2152.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type grab ww_sample_duration 0 concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 130000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id OU20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439484 SAMN31274696 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Boulder, county isolation_source wastewater collection_site_id NL project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.1 instantaneous_flow NaN ww_population 1786.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 663000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id NL20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439485 SAMN31274676 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, Adams, county isolation_source wastewater collection_site_id SP project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 3.69 instantaneous_flow NaN ww_population 54561.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 121262.4197 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SP20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439486 SAMN31274677 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SQ project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 3.58 instantaneous_flow NaN ww_population 23194.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 402495.9115 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SQ20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439487 SAMN31274678 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, Denver Arapahoe, county isolation_source wastewater collection_site_id SR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 16.7 instantaneous_flow NaN ww_population 247443.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 405412.1572 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SR20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439488 SAMN31274544 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SQ project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 3.6 instantaneous_flow NaN ww_population 23194.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 130422.4167 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SQ20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439489 SAMN31274700 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, La Plata, county isolation_source wastewater collection_site_id ST project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.6569999999999998 instantaneous_flow NaN ww_population 23429.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 237000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id ST20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439490 SAMN31274698 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Douglas, county isolation_source wastewater collection_site_id PC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 5.26 instantaneous_flow NaN ww_population 34786.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 187000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id PC20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439491 SAMN31274701 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-04 geo_loc_name USA: Colorado, Las Animas, county isolation_source wastewater collection_site_id TD project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow NaN instantaneous_flow 1.1 ww_population 14286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type grab ww_sample_duration 0 concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 72200.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id TD20220504 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439492 SAMN31274702 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, San Miguel, county isolation_source wastewater collection_site_id TR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 15000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id TR20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439493 SAMN31274703 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id UB project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant instantaneous_flow NaN ww_population 35643.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 81400.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id UB20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439494 SAMN31274704 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Eagle, county isolation_source wastewater collection_site_id VA project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.38 instantaneous_flow NaN ww_population 19286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 30300.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id VA20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439495 SAMN31274705 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id BR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.4969999999999999 instantaneous_flow NaN ww_population 28571.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 48100.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id BR20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439496 SAMN31274706 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, La Plata, county isolation_source wastewater collection_site_id PR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.032 instantaneous_flow NaN ww_population 1786.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 922.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id PR20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439497 SAMN31274707 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Routt, county isolation_source wastewater collection_site_id SS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 4.165 instantaneous_flow NaN ww_population 43741.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 32900.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SS20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439498 SAMN31274547 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id LB project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.629 instantaneous_flow NaN ww_population 9292.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 76344.31444 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id LB20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439499 SAMN31274709 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Boulder, county isolation_source wastewater collection_site_id SB project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 11.12 instantaneous_flow NaN ww_population 89383.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 209257.8837 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SB20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439500 SAMN31274710 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Broomfield, county isolation_source wastewater collection_site_id SC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 5.932 instantaneous_flow NaN ww_population 53356.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 141627.575 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SC20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439501 SAMN31274711 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, El Paso, county isolation_source wastewater collection_site_id SD project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 8.4 instantaneous_flow NaN ww_population 102204.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 167218.6112 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SD20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439502 SAMN31274712 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, El Paso, county isolation_source wastewater collection_site_id SE project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 26.46 instantaneous_flow NaN ww_population 303855.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 85867.55201 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SE20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439503 SAMN31274713 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SG project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.97 instantaneous_flow NaN ww_population 17997.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 136453.6884 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SG20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439504 SAMN31274714 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SH project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 9.077 instantaneous_flow NaN ww_population 92127.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 114650.0665 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SH20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439505 SAMN31274715 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SI project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 26621.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SI20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439506 SAMN31274550 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-20 geo_loc_name USA: Colorado, Las Animas, county isolation_source wastewater collection_site_id TD project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow NaN instantaneous_flow 1.07 ww_population 14286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type grab ww_sample_duration 0 concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 148000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id TD20220420 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439507 SAMN31274739 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-22 geo_loc_name USA: Colorado, Weld, county isolation_source wastewater collection_site_id WS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 20000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id WS20220422 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439508 SAMN31274740 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-18 geo_loc_name USA: Colorado, Eagle, county isolation_source wastewater collection_site_id VA project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 19286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id VA20220418 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439509 SAMN31274762 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SG project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 2.377 instantaneous_flow NaN ww_population 17997.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 6129.0465619999995 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SG20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439510 SAMN31274763 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SH project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 15.823 instantaneous_flow NaN ww_population 92127.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 7035.880937999999 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SH20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439511 SAMN31274764 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SI project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 4.89 instantaneous_flow NaN ww_population 26621.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 3242.5843449999998 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SI20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439512 SAMN31274765 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, Weld, county isolation_source wastewater collection_site_id SJ project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 7.64 instantaneous_flow NaN ww_population 83319.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 4256.912168 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SJ20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439513 SAMN31274766 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, Boulder Weld, county isolation_source wastewater collection_site_id SK project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 8.25 instantaneous_flow NaN ww_population 75544.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 2484.548545 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SK20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439514 SAMN31274767 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, Boulder, county isolation_source wastewater collection_site_id SL project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 2.13 instantaneous_flow NaN ww_population 17601.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 3476.517614 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SL20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439515 SAMN31274768 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, Denver, county isolation_source wastewater collection_site_id SM project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 35.4 instantaneous_flow NaN ww_population 345454.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 4757.856218 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SM20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439516 SAMN31274769 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, Denver, county isolation_source wastewater collection_site_id SN project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 68.8 instantaneous_flow NaN ww_population 709904.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 10715.38227 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SN20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439517 SAMN31274553 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-21 geo_loc_name USA: Colorado, San Miguel, county isolation_source wastewater collection_site_id TR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.809 instantaneous_flow NaN ww_population 15000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 10500.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id TR20220421 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439518 SAMN31274770 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, Pueblo, county isolation_source wastewater collection_site_id SO project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 11.164000000000001 instantaneous_flow NaN ww_population 96515.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 13382.6619 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SO20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439519 SAMN31274771 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, Adams, county isolation_source wastewater collection_site_id SP project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 3.83 instantaneous_flow NaN ww_population 54561.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 9938.456018 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SP20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439520 SAMN31274772 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SQ project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 4.92 instantaneous_flow NaN ww_population 23194.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 28208.32754 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SQ20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439521 SAMN31274773 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, Denver Arapahoe, county isolation_source wastewater collection_site_id SR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 18.6 instantaneous_flow NaN ww_population 247443.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 17294.24555 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SR20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439522 SAMN31274554 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-21 geo_loc_name USA: Colorado, Ouray, county isolation_source wastewater collection_site_id OU project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow NaN ww_population 2152.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type grab ww_sample_duration 0 concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 9700.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id OU20220421 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439523 SAMN31274555 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-21 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id UB project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 2.335 instantaneous_flow NaN ww_population 35643.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 147000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id UB20220421 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439524 SAMN31274556 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-21 geo_loc_name USA: Colorado, La Plata, county isolation_source wastewater collection_site_id ST project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.61 instantaneous_flow NaN ww_population 23429.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 93100.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id ST20220421 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439525 SAMN31274557 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-21 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id UTEP project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.6829999999999999 instantaneous_flow NaN ww_population 5818.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 146000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id UTEP20220421 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439526 SAMN31274558 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, La Plata, county isolation_source wastewater collection_site_id ST project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 23429.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id ST20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439527 SAMN31274578 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Boulder, county isolation_source wastewater collection_site_id SL project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.7 instantaneous_flow NaN ww_population 17601.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 88858.19903999999 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SL20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439528 SAMN31274532 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, El Paso, county isolation_source wastewater collection_site_id SD project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 9.0 instantaneous_flow NaN ww_population 102204.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 127693.0582 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SD20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439529 SAMN31274759 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, El Paso, county isolation_source wastewater collection_site_id SD project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 9.12 instantaneous_flow NaN ww_population 102204.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 86189.41889 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SD20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439530 SAMN31274628 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Pueblo, county isolation_source wastewater collection_site_id SO project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 10.167 instantaneous_flow NaN ww_population 96515.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 110877.0648 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SO20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439531 SAMN31274622 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SI project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 3.055 instantaneous_flow NaN ww_population 26621.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 91124.6109 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SI20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439532 SAMN31274623 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Weld, county isolation_source wastewater collection_site_id SJ project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 7.73 instantaneous_flow NaN ww_population 83319.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 143101.5677 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SJ20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439533 SAMN31274625 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Boulder, county isolation_source wastewater collection_site_id SL project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.8 instantaneous_flow NaN ww_population 17601.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 151033.1894 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SL20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439534 SAMN31274624 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Boulder Weld, county isolation_source wastewater collection_site_id SK project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 7.17 instantaneous_flow NaN ww_population 75544.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 195078.2856 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SK20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439535 SAMN31274670 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, Weld, county isolation_source wastewater collection_site_id SJ project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 7.26 instantaneous_flow NaN ww_population 83319.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 156537.7429 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SJ20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439536 SAMN31274672 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, Boulder, county isolation_source wastewater collection_site_id SL project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.5 instantaneous_flow NaN ww_population 17601.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 204841.91100000002 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SL20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439537 SAMN31274673 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, Denver, county isolation_source wastewater collection_site_id SM project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 26.7 instantaneous_flow NaN ww_population 345454.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 122289.5433 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SM20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439538 SAMN31274674 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, Denver, county isolation_source wastewater collection_site_id SN project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 56.2 instantaneous_flow NaN ww_population 709904.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 329819.1052 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SN20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439539 SAMN31274675 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, Pueblo, county isolation_source wastewater collection_site_id SO project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 10.574000000000002 instantaneous_flow NaN ww_population 96515.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 57128.40233 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SO20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439540 SAMN31274657 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-03 geo_loc_name USA: Colorado, Weld, county isolation_source wastewater collection_site_id WS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.78 instantaneous_flow NaN ww_population 20000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 284000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id WS20220503 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439541 SAMN31274656 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Eagle, county isolation_source wastewater collection_site_id VA project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.44 instantaneous_flow NaN ww_population 19286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 16000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id VA20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439542 SAMN31274658 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-03 geo_loc_name USA: Colorado, El Paso, county isolation_source wastewater collection_site_id CK project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.704 instantaneous_flow NaN ww_population 34286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 49500.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id CK20220503 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439543 SAMN31274679 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id LA project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 6.055 instantaneous_flow NaN ww_population 66429.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 207118.2341 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id LA20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439544 SAMN31274680 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id LB project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.61 instantaneous_flow NaN ww_population 9292.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 326923.5075 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id LB20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439545 SAMN31274681 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-09 geo_loc_name USA: Colorado, Larimer Weld, county isolation_source wastewater collection_site_id LC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.055 instantaneous_flow NaN ww_population 7946.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 44110.143710000004 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id LC20220509 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439546 SAMN31274682 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Arapahoe, county isolation_source wastewater collection_site_id AC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 25714.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id AC20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439547 SAMN31274683 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Alamosa, county isolation_source wastewater collection_site_id AL project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 18364.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id AL20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439548 SAMN31274684 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Pitkin, county isolation_source wastewater collection_site_id AP project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.966 instantaneous_flow NaN ww_population 5500.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration NaN concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 37100.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id AP20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439549 SAMN31274686 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Eagle, county isolation_source wastewater collection_site_id AN project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.46 instantaneous_flow NaN ww_population 30714.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 59200.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id AN20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439550 SAMN31274687 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Adams, county isolation_source wastewater collection_site_id BT project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.3 instantaneous_flow NaN ww_population 21429.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 70400.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id BT20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439551 SAMN31274688 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, El Paso, county isolation_source wastewater collection_site_id CK project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.729 instantaneous_flow NaN ww_population 34286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 86500.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id CK20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439552 SAMN31274708 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Adams Arapahoe, county isolation_source wastewater collection_site_id SA project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 4.5859 instantaneous_flow NaN ww_population 268004.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 183684.5494 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SA20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439553 SAMN31274545 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Denver Arapahoe, county isolation_source wastewater collection_site_id SR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 16.3 instantaneous_flow NaN ww_population 247443.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 201290.8723 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SR20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439554 SAMN31274689 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id CM project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.44 instantaneous_flow NaN ww_population 7857.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 194000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id CM20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439555 SAMN31274690 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Eagle, county isolation_source wastewater collection_site_id ED project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.767 instantaneous_flow NaN ww_population 21071.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 53100.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id ED20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439556 SAMN31274692 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-04 geo_loc_name USA: Colorado, Mesa, county isolation_source wastewater collection_site_id GJ project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant instantaneous_flow NaN ww_population 89286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 120000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id GJ20220504 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439557 SAMN31274693 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Gunnison, county isolation_source wastewater collection_site_id GN project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.813 instantaneous_flow NaN ww_population 30000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 44000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id GN20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439558 SAMN31274694 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Garfield, county isolation_source wastewater collection_site_id GS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.0374 instantaneous_flow NaN ww_population 16714.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 37100.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id GS20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439559 SAMN31274760 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, El Paso, county isolation_source wastewater collection_site_id SE project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 29.84 instantaneous_flow NaN ww_population 303855.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 72331.43416 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SE20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439560 SAMN31274761 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id UTEP project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 5818.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id UTEP20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439561 SAMN31274562 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-21 geo_loc_name USA: Colorado, Pitkin, county isolation_source wastewater collection_site_id AP project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 5500.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id AP20220421 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439562 SAMN31274563 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-26 geo_loc_name USA: Colorado, Boulder, county isolation_source wastewater collection_site_id NL project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 1786.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id NL20220426 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439563 SAMN31274564 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-26 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id KS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 18571.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id KS20220426 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439564 SAMN31274565 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-26 geo_loc_name USA: Colorado, El Paso, county isolation_source wastewater collection_site_id CK project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 34286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id CK20220426 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439565 SAMN31274566 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-26 geo_loc_name USA: Colorado, Morgan, county isolation_source wastewater collection_site_id BH project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.758 instantaneous_flow NaN ww_population 12000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 29400.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id BH20220426 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439566 SAMN31274567 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-26 geo_loc_name USA: Colorado, Weld, county isolation_source wastewater collection_site_id WS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 20000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id WS20220426 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439567 SAMN31274568 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Adams Arapahoe, county isolation_source wastewater collection_site_id SA project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 4.8021 instantaneous_flow NaN ww_population 268004.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 111450.3654 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SA20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439568 SAMN31274533 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, El Paso, county isolation_source wastewater collection_site_id SE project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 27.47 instantaneous_flow NaN ww_population 303855.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 90080.77296 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SE20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439569 SAMN31274569 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Boulder, county isolation_source wastewater collection_site_id SB project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 10.83 instantaneous_flow NaN ww_population 89383.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 275756.1947 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SB20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439570 SAMN31274570 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Broomfield, county isolation_source wastewater collection_site_id SC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 6.10268 instantaneous_flow NaN ww_population 53356.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 44033.54764 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SC20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439571 SAMN31274571 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, El Paso, county isolation_source wastewater collection_site_id SD project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 8.95 instantaneous_flow NaN ww_population 102204.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 175344.9837 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SD20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439572 SAMN31274573 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SG project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.983 instantaneous_flow NaN ww_population 17997.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 102938.8451 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SG20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439573 SAMN31274572 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, El Paso, county isolation_source wastewater collection_site_id SE project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 27.66 instantaneous_flow NaN ww_population 303855.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 87798.52219 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SE20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439574 SAMN31274574 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SH project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 9.87 instantaneous_flow NaN ww_population 92127.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 96179.09721 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SH20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439575 SAMN31274575 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SI project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 2.73 instantaneous_flow NaN ww_population 26621.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 50654.724930000004 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SI20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439576 SAMN31274576 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Weld, county isolation_source wastewater collection_site_id SJ project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 7.41 instantaneous_flow NaN ww_population 83319.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 36827.48097 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SJ20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439577 SAMN31274577 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Boulder Weld, county isolation_source wastewater collection_site_id SK project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 6.81 instantaneous_flow NaN ww_population 75544.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 142705.7484 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SK20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439578 SAMN31274534 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SG project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 2.019 instantaneous_flow NaN ww_population 17997.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 120671.4185 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SG20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439579 SAMN31274579 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Denver, county isolation_source wastewater collection_site_id SM project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 26.6 instantaneous_flow NaN ww_population 345454.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 50211.54769 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SM20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439580 SAMN31274580 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Denver, county isolation_source wastewater collection_site_id SN project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 57.7 instantaneous_flow NaN ww_population 709904.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 113048.2681 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SN20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439581 SAMN31274559 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Las Animas, county isolation_source wastewater collection_site_id TD project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 14286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id TD20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439582 SAMN31274581 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Pueblo, county isolation_source wastewater collection_site_id SO project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 10.380999999999998 instantaneous_flow NaN ww_population 96515.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 20255.7808 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SO20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439583 SAMN31274716 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Weld, county isolation_source wastewater collection_site_id SJ project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 7.13 instantaneous_flow NaN ww_population 83319.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 80957.30154 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SJ20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439584 SAMN31274717 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Boulder Weld, county isolation_source wastewater collection_site_id SK project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 6.5 instantaneous_flow NaN ww_population 75544.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 132558.8644 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SK20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439585 SAMN31274718 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Boulder, county isolation_source wastewater collection_site_id SL project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.8183 instantaneous_flow NaN ww_population 17601.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 155997.9637 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SL20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439586 SAMN31274548 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Larimer Weld, county isolation_source wastewater collection_site_id LC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.987 instantaneous_flow NaN ww_population 7946.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 4820.377769 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id LC20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439587 SAMN31274546 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id LA project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 5.624 instantaneous_flow NaN ww_population 66429.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 138408.923 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id LA20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439588 SAMN31274699 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Archuleta, county isolation_source wastewater collection_site_id PG project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.002 instantaneous_flow NaN ww_population 27857.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 92500.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id PG20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439589 SAMN31274722 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Adams, county isolation_source wastewater collection_site_id SP project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 3.77 instantaneous_flow NaN ww_population 54561.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 93985.44125 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SP20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439590 SAMN31274723 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SQ project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 3.24 instantaneous_flow NaN ww_population 23194.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 163225.5062 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SQ20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439591 SAMN31274724 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Denver Arapahoe, county isolation_source wastewater collection_site_id SR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 16.4 instantaneous_flow NaN ww_population 247443.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 247127.484 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SR20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439592 SAMN31274725 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id LA project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 3.41 instantaneous_flow NaN ww_population 66429.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 133170.201 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id LA20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439593 SAMN31274726 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id LB project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.5 instantaneous_flow NaN ww_population 9292.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 96840.38289 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id LB20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439594 SAMN31274727 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Larimer Weld, county isolation_source wastewater collection_site_id LC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.9890000000000001 instantaneous_flow NaN ww_population 7946.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 49041.03043 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id LC20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439595 SAMN31274728 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Arapahoe, county isolation_source wastewater collection_site_id AC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 25714.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id AC20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439596 SAMN31274531 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Broomfield, county isolation_source wastewater collection_site_id SC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 5.931 instantaneous_flow NaN ww_population 53356.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 134988.5232 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SC20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439597 SAMN31274549 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-21 geo_loc_name USA: Colorado, Archuleta, county isolation_source wastewater collection_site_id PG project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.9620000000000001 instantaneous_flow NaN ww_population 27857.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 49900.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id PG20220421 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439598 SAMN31274729 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Eagle, county isolation_source wastewater collection_site_id AN project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 30714.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id AN20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439599 SAMN31274730 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Adams, county isolation_source wastewater collection_site_id BT project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 21429.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id BT20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439600 SAMN31274731 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Eagle, county isolation_source wastewater collection_site_id ED project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 21071.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id ED20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439601 SAMN31274732 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Ouray, county isolation_source wastewater collection_site_id OU project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 2152.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id OU20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439602 SAMN31274733 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Garfield, county isolation_source wastewater collection_site_id GS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 16714.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id GS20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439603 SAMN31274734 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Gunnison, county isolation_source wastewater collection_site_id GN project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 30000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id GN20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439604 SAMN31274735 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Douglas, county isolation_source wastewater collection_site_id PC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 34786.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id PC20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439605 SAMN31274736 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-21 geo_loc_name USA: Colorado, Routt, county isolation_source wastewater collection_site_id SS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 43741.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SS20220421 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439606 SAMN31274737 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Routt, county isolation_source wastewater collection_site_id SS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 43741.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SS20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439607 SAMN31274560 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-07 geo_loc_name USA: Colorado, Douglas, county isolation_source wastewater collection_site_id PC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 34786.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id PC20220407 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439608 SAMN31274561 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, La Plata, county isolation_source wastewater collection_site_id PR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 1786.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id PR20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439609 SAMN31274583 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SQ project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 3.6 instantaneous_flow NaN ww_population 23194.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 106810.56599999999 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SQ20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439610 SAMN31274584 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Denver Arapahoe, county isolation_source wastewater collection_site_id SR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 16.6 instantaneous_flow NaN ww_population 247443.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 123527.1345 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SR20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439611 SAMN31274585 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id LA project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 5.73 instantaneous_flow NaN ww_population 66429.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 90406.32906 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id LA20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439612 SAMN31274586 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id LB project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.541 instantaneous_flow NaN ww_population 9292.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 69009.41021 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id LB20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439613 SAMN31274608 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Eagle, county isolation_source wastewater collection_site_id VA project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.359 instantaneous_flow NaN ww_population 19286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 16500.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id VA20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439614 SAMN31274587 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Larimer Weld, county isolation_source wastewater collection_site_id LC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.0390000000000001 instantaneous_flow NaN ww_population 7946.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 60718.063729999994 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id LC20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439615 SAMN31274588 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Alamosa, county isolation_source wastewater collection_site_id AL project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.239 instantaneous_flow NaN ww_population 18364.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 9380.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id AL20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439616 SAMN31274535 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SH project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 92127.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SH20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439617 SAMN31274589 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Pitkin, county isolation_source wastewater collection_site_id AP project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.98 instantaneous_flow NaN ww_population 5500.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration NaN concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 24700.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id AP20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439618 SAMN31274590 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id BR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.6840000000000002 instantaneous_flow NaN ww_population 28571.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 40600.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id BR20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439619 SAMN31274591 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id CM project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.207 instantaneous_flow NaN ww_population 7857.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 119000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id CM20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439620 SAMN31274592 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Mesa, county isolation_source wastewater collection_site_id GJ project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 8.14 instantaneous_flow NaN ww_population 89286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 47900.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id GJ20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439621 SAMN31274593 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, El Paso, county isolation_source wastewater collection_site_id CK project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.702 instantaneous_flow NaN ww_population 34286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 91600.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id CK20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439622 SAMN31274594 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id CM project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.132 instantaneous_flow NaN ww_population 7857.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 623000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id CM20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439623 SAMN31274595 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Eagle, county isolation_source wastewater collection_site_id ED project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.79 instantaneous_flow NaN ww_population 21071.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 57000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id ED20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439624 SAMN31274596 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id FC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.514 instantaneous_flow NaN ww_population 14286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 52900.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id FC20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439625 SAMN31274597 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Gunnison, county isolation_source wastewater collection_site_id GN project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.599 instantaneous_flow NaN ww_population 30000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 26300.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id GN20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439626 SAMN31274598 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Garfield, county isolation_source wastewater collection_site_id GS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.03 instantaneous_flow NaN ww_population 16714.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 51500.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id GS20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439627 SAMN31274536 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SI project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 2.68 instantaneous_flow NaN ww_population 26621.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 52883.47128 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SI20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439628 SAMN31274599 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id KS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.6724 instantaneous_flow NaN ww_population 18571.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 21400.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id KS20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439629 SAMN31274600 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Boulder, county isolation_source wastewater collection_site_id NL project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.08 instantaneous_flow NaN ww_population 1786.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 952.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id NL20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439630 SAMN31274601 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Ouray, county isolation_source wastewater collection_site_id OU project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow NaN ww_population 2152.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type grab ww_sample_duration 0 concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 11100.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id OU20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439631 SAMN31274582 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Adams, county isolation_source wastewater collection_site_id SP project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 3.89 instantaneous_flow NaN ww_population 54561.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 25309.92672 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SP20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439632 SAMN31274605 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-27 geo_loc_name USA: Colorado, Las Animas, county isolation_source wastewater collection_site_id TD project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow NaN instantaneous_flow 1.09 ww_population 14286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type grab ww_sample_duration 0 concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 72800.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id TD20220427 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439633 SAMN31274606 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-27 geo_loc_name USA: Colorado, San Miguel, county isolation_source wastewater collection_site_id TR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.6509999999999999 instantaneous_flow NaN ww_population 15000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 39200.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id TR20220427 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439634 SAMN31274607 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id UTEP project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.7040000000000001 instantaneous_flow NaN ww_population 5818.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 238000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id UTEP20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439635 SAMN31274537 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Weld, county isolation_source wastewater collection_site_id SJ project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 7.19 instantaneous_flow NaN ww_population 83319.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 103084.1412 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SJ20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439636 SAMN31274609 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Arapahoe, county isolation_source wastewater collection_site_id AC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 2.42 instantaneous_flow NaN ww_population 25714.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 71900.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id AC20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439637 SAMN31274610 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Alamosa, county isolation_source wastewater collection_site_id AL project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.39 instantaneous_flow NaN ww_population 18364.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 38300.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id AL20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439638 SAMN31274611 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Eagle, county isolation_source wastewater collection_site_id AN project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.49 instantaneous_flow NaN ww_population 30714.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 35100.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id AN20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439639 SAMN31274612 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Pitkin, county isolation_source wastewater collection_site_id AP project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.826 instantaneous_flow NaN ww_population 5500.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration NaN concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 13800.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id AP20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439640 SAMN31274613 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-03 geo_loc_name USA: Colorado, Morgan, county isolation_source wastewater collection_site_id BH project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.635 instantaneous_flow NaN ww_population 12000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 81200.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id BH20220503 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439641 SAMN31274614 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-02 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id BR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.518 instantaneous_flow NaN ww_population 28571.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 93400.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id BR20220502 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439642 SAMN31274615 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Adams Arapahoe, county isolation_source wastewater collection_site_id SA project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 4.8038 instantaneous_flow NaN ww_population 268004.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 262170.2108 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SA20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439643 SAMN31274616 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Boulder, county isolation_source wastewater collection_site_id SB project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 12.37 instantaneous_flow NaN ww_population 89383.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 237025.3879 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SB20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439644 SAMN31274617 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Broomfield, county isolation_source wastewater collection_site_id SC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 6.616739999999999 instantaneous_flow NaN ww_population 53356.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 208211.0986 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SC20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439645 SAMN31274618 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, El Paso, county isolation_source wastewater collection_site_id SD project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 8.5 instantaneous_flow NaN ww_population 102204.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 234503.5957 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SD20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439646 SAMN31274538 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Boulder Weld, county isolation_source wastewater collection_site_id SK project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 6.85 instantaneous_flow NaN ww_population 75544.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 118276.4663 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SK20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439647 SAMN31274619 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, El Paso, county isolation_source wastewater collection_site_id SE project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 26.88 instantaneous_flow NaN ww_population 303855.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 150184.1223 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SE20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439648 SAMN31274620 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SG project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 2.171 instantaneous_flow NaN ww_population 17997.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 70608.4112 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SG20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439649 SAMN31274621 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id SH project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 11.335999999999999 instantaneous_flow NaN ww_population 92127.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 109462.8296 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SH20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439650 SAMN31274602 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Douglas, county isolation_source wastewater collection_site_id PC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 4.962 instantaneous_flow NaN ww_population 34786.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 267000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id PC20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439651 SAMN31274603 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Archuleta, county isolation_source wastewater collection_site_id PG project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.081 instantaneous_flow NaN ww_population 27857.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 46100.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id PG20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439652 SAMN31274604 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, La Plata, county isolation_source wastewater collection_site_id ST project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.63 instantaneous_flow NaN ww_population 23429.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 113000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id ST20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439653 SAMN31274626 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Denver, county isolation_source wastewater collection_site_id SM project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 27.3 instantaneous_flow NaN ww_population 345454.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 159904.2663 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SM20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439654 SAMN31274627 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-05-05 geo_loc_name USA: Colorado, Denver, county isolation_source wastewater collection_site_id SN project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 59.0 instantaneous_flow NaN ww_population 709904.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 346024.7925 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SN20220505 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439655 SAMN31274738 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id UB project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 35643.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id UB20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439656 SAMN31274758 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, Broomfield, county isolation_source wastewater collection_site_id SC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 8.21841 instantaneous_flow NaN ww_population 53356.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 2200.281232 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SC20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439657 SAMN31274719 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Denver, county isolation_source wastewater collection_site_id SM project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 26.1 instantaneous_flow NaN ww_population 345454.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 94035.24497999999 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SM20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439658 SAMN31274720 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Denver, county isolation_source wastewater collection_site_id SN project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 57.1 instantaneous_flow NaN ww_population 709904.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 175099.5857 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SN20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439659 SAMN31274721 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Pueblo, county isolation_source wastewater collection_site_id SO project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 10.173 instantaneous_flow NaN ww_population 96515.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 23698.06801 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SO20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439660 SAMN31274741 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-15 geo_loc_name USA: Colorado, Weld, county isolation_source wastewater collection_site_id WS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 20000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id WS20220415 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439661 SAMN31274742 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-14 geo_loc_name USA: Colorado, Weld, county isolation_source wastewater collection_site_id WS project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 20000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id WS20220414 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439662 SAMN31274743 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-13 geo_loc_name USA: Colorado, La Plata, county isolation_source wastewater collection_site_id PR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 1786.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id PR20220413 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439663 SAMN31274744 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id UTEP project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 5818.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id UTEP20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439664 SAMN31274745 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-25 geo_loc_name USA: Colorado, Eagle, county isolation_source wastewater collection_site_id VA project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow missing instantaneous_flow missing ww_population 19286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type missing ww_sample_duration missing concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc missing ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene missing purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id VA20220425 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439665 SAMN31274747 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Pitkin, county isolation_source wastewater collection_site_id AP project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.9390000000000001 instantaneous_flow NaN ww_population 5500.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration NaN concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 23800.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id AP20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439666 SAMN31274746 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-21 geo_loc_name USA: Colorado, El Paso, county isolation_source wastewater collection_site_id CK project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.736 instantaneous_flow NaN ww_population 34286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 25200.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id CK20220421 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439667 SAMN31274748 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Eagle, county isolation_source wastewater collection_site_id AN project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.5319999999999998 instantaneous_flow NaN ww_population 30714.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 27600.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id AN20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439668 SAMN31274551 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-21 geo_loc_name USA: Colorado, Eagle, county isolation_source wastewater collection_site_id VA project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.475 instantaneous_flow NaN ww_population 19286.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 109000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id VA20220421 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439669 SAMN31274750 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Alamosa, county isolation_source wastewater collection_site_id AL project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.24 instantaneous_flow NaN ww_population 18364.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 12500.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id AL20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439670 SAMN31274749 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Arapahoe, county isolation_source wastewater collection_site_id AC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 2.208 instantaneous_flow NaN ww_population 25714.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 151000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id AC20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439671 SAMN31274751 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Morgan, county isolation_source wastewater collection_site_id BH project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.603 instantaneous_flow NaN ww_population 12000.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 44200.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id BH20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439672 SAMN31274752 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Summit, county isolation_source wastewater collection_site_id BR project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.632 instantaneous_flow NaN ww_population 28571.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 102000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id BR20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439673 SAMN31274753 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-28 geo_loc_name USA: Colorado, Adams, county isolation_source wastewater collection_site_id BT project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.3 instantaneous_flow NaN ww_population 21429.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 30100.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id BT20220428 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439674 SAMN31274754 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, Larimer, county isolation_source wastewater collection_site_id LB project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 0.532275 instantaneous_flow NaN ww_population 9292.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 23731.06757 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id LB20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439675 SAMN31274755 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, Larimer Weld, county isolation_source wastewater collection_site_id LC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 1.587 instantaneous_flow NaN ww_population 7946.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 0.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id LC20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439676 SAMN31274756 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, Adams Arapahoe, county isolation_source wastewater collection_site_id SA project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 4.871 instantaneous_flow NaN ww_population 268004.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 21999.44275 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SA20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439677 SAMN31274757 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2021-06-03 geo_loc_name USA: Colorado, Boulder, county isolation_source wastewater collection_site_id SB project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 20.9 instantaneous_flow NaN ww_population 89383.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 4240.83086 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n1 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id SB20210603 BioSampleModel SARS-CoV-2: wastewater surveillance SRS15439678 SAMN31274552 527639 wastewater metagenome bioproject 850375 PRJNA850375 collection_date 2022-04-21 geo_loc_name USA: Colorado, Douglas, county isolation_source wastewater collection_site_id PC project_name SARS-CoV-2 Colorado wastewater genomic surveillance Raw sequence reads collected_by CDPHE purpose_of_ww_sampling public health surveillance community-level ww_sample_site wastewater treatment plant ww_flow 4.976 instantaneous_flow NaN ww_population 34786.0 ww_population_source census blocks clipped to wastewater service area polygon ww_sample_matrix raw wastewater ww_sample_type composite ww_sample_duration 24 hours concentration_method innovaprep ultrafiltration extraction_method qiagen EZ1 RNA extraction kit extraction_control MHV ww_surv_target_1 SARS-CoV-2 ww_surv_target_1_known_present no ww_surv_target_1_conc 150000.0 ww_surv_target_1_conc_unit copies/L ww_surv_target_1_gene n2 purpose_of_ww_sequencing diversity of mutations across entire genome sequenced_by CDPHE ww_surv_system_sample_id PC20220421 BioSampleModel SARS-CoV-2: wastewater surveillance