SRX18271603 BAL-003_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764871 SAMN29794950 BAL-003_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271604 BAL-005_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764871 SAMN29794950 BAL-005_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271605 BAS-0010_S102_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764872 SAMN29794964 BAS-0010_S102_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271606 BAS-003_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764872 SAMN29794964 BAS-003_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271607 BAS-005_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764872 SAMN29794964 BAS-005_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271608 BAS-006_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764872 SAMN29794964 BAS-006_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271609 BAS-007_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764872 SAMN29794964 BAS-007_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271610 BAS-008_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764872 SAMN29794964 BAS-008_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271611 BAS-009_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764872 SAMN29794964 BAS-009_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271612 BAS-014_S103_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764872 SAMN29794964 BAS-014_S103_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271613 BAS-015_S104_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764872 SAMN29794964 BAS-015_S104_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271614 BAS-016_S105_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764872 SAMN29794964 BAS-016_S105_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271615 BAL-006_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764871 SAMN29794950 BAL-006_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271616 BAS23-A_final_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764872 SAMN29794964 BAS23-A_final_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271617 BAS-809455_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764872 SAMN29794964 BAS-809455_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271618 BIO_23A_final_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764873 SAMN29795340 BIO_23A_final_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271619 BIO-0010_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764873 SAMN29795340 BIO-0010_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271620 BIO-0014_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764873 SAMN29795340 BIO-0014_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271621 BIO-0015_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764873 SAMN29795340 BIO-0015_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271622 BIO-005_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764873 SAMN29795340 BIO-005_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271623 BIO-006_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764873 SAMN29795340 BIO-006_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271624 BIO-007_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764873 SAMN29795340 BIO-007_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271625 BIO-008_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764873 SAMN29795340 BIO-008_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271626 BAL-007_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764871 SAMN29794950 BAL-007_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271627 BIO-009_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764873 SAMN29795340 BIO-009_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271628 BIO-809455_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764873 SAMN29795340 BIO-809455_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271629 CEP_0010_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764874 SAMN29795004 CEP_0010_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271630 CEP_014_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764874 SAMN29795004 CEP_014_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271631 CEP_016.final_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764874 SAMN29795004 CEP_016.final_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271632 CEP_23A.final_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764874 SAMN29795004 CEP_23A.final_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271633 CEP-003_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764874 SAMN29795004 CEP-003_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271634 CEP-005_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764874 SAMN29795004 CEP-005_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271635 CEP-006_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764874 SAMN29795004 CEP-006_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271636 CEP-007_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764874 SAMN29795004 CEP-007_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271637 BAL-008_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764871 SAMN29794950 BAL-008_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271638 CEP-008_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764874 SAMN29795004 CEP-008_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271639 CEP-009_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764874 SAMN29795004 CEP-009_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271640 CEP-809455_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764874 SAMN29795004 CEP-809455_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271641 ES_0010_final_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764875 SAMN29794932 ES_0010_final_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271642 ES_014_final_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764875 SAMN29794932 ES_014_final_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271643 ES_016_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764875 SAMN29794932 ES_016_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271644 ES_23A_final_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764875 SAMN29794932 ES_23A_final_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271645 ES_V1_015_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764875 SAMN29794932 ES_V1_015_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271646 ES-003_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764875 SAMN29794932 ES-003_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271647 ES-004_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764875 SAMN29794932 ES-004_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271648 BAL-009_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764871 SAMN29794950 BAL-009_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271649 ES-005_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764875 SAMN29794932 ES-005_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271650 ES-006_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764875 SAMN29794932 ES-006_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271651 ES-007_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764875 SAMN29794932 ES-007_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271652 ES-008_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764875 SAMN29794932 ES-008_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271653 ES-009_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764875 SAMN29794932 ES-009_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271654 ES-011_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764875 SAMN29794932 ES-011_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271655 ES-013_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764875 SAMN29794932 ES-013_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271656 ES-809455_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764875 SAMN29794932 ES-809455_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271657 EX_010_S105_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764876 SAMN29794949 EX_010_S105_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271658 EX_014_S106_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764876 SAMN29794949 EX_014_S106_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271659 BAL-014_S107_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764871 SAMN29794950 BAL-014_S107_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271660 EX_015_S107_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764876 SAMN29794949 EX_015_S107_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271661 EX_016_S108_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764876 SAMN29794949 EX_016_S108_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271662 EX_23A_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764876 SAMN29794949 EX_23A_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271663 EX-003_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764876 SAMN29794949 EX-003_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271664 EX-004_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764876 SAMN29794949 EX-004_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271665 EX-005_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764876 SAMN29794949 EX-005_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271666 EX-006_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764876 SAMN29794949 EX-006_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271667 EX-007_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764876 SAMN29794949 EX-007_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271668 EX-008_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764876 SAMN29794949 EX-008_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271669 EX-009_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764876 SAMN29794949 EX-009_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271670 BAL-015_S108_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764871 SAMN29794950 BAL-015_S108_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271671 EX-809455_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764876 SAMN29794949 EX-809455_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271672 BAL-016_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764871 SAMN29794950 BAL-016_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq SRX18271673 BAL23-A_final_R1_001.fastq.gz SRP408011 PRJNA859796 16S rRNA Gene Sequencing. 16S rRNA gene libraries were created as described by Caporaso et al. [62], employing primers that amplify the 16S rRNA gene variable region 4 (V4) region of all bacteria and archaea. A mock community and no template control were included. Amplicons were quantified using the KAPA Library Quantification Kit for Illumina Platforms (KR0405, KAPABiosystems, Wilmington, MA), normalized and pooled. Library quality was assessed by Agilent Bioanalyzer chip then the library was prepared for sequencing on the Illumina MiSeq instrument using a MiSeq v3 Reagent kit (2 x 300 bp reads) SRS15764871 SAMN29794950 BAL23-A_final_R1_001.fastq.gz AMPLICON METAGENOMIC PCR Illumina MiSeq