SRX18272190 S1 SRP408035 bp0 The libraries were prepared using Illumina DNA Prep, (M) Tagmentation library preparation kit (Illumina) following the manufacturer's user guide. 20-50 ng DNA was used to prepare the libraries. The samples underwent the simultaneous fragmentation and addition of adapter sequences. These adapters are utilized during a limited-cycle PCR in which unique indices were added to the sample. Following the library preparation, the final concentration of the libraries were measured using the Qubit dsDNA HS assay kit, and the average library size was determined using the Agilent 2100 Bioanalyzer (Agilent Technologies). The libraries were then pooled in equimolar ratios of 0.6nM, and sequenced paired end (2 x 150 bp) for 300 cycles using the Illumina NovaSeq 6000 system SRS15765372 Rhizosphere soil S1 WGS METAGENOMIC PCR Illumina NovaSeq 6000 SRX18272191 S2 SRP408035 bp0 The libraries were prepared using Illumina DNA Prep, (M) Tagmentation library preparation kit (Illumina) following the manufacturer's user guide. 20-50 ng DNA was used to prepare the libraries. The samples underwent the simultaneous fragmentation and addition of adapter sequences. These adapters are utilized during a limited-cycle PCR in which unique indices were added to the sample. Following the library preparation, the final concentration of the libraries were measured using the Qubit dsDNA HS assay kit, and the average library size was determined using the Agilent 2100 Bioanalyzer (Agilent Technologies). The libraries were then pooled in equimolar ratios of 0.6nM, and sequenced paired end (2 x 150 bp) for 300 cycles using the Illumina NovaSeq 6000 system SRS15765372 Rhizosphere soil S2 WGS METAGENOMIC PCR Illumina NovaSeq 6000 SRX18272192 S3 SRP408035 bp0 The libraries were prepared using Illumina DNA Prep, (M) Tagmentation library preparation kit (Illumina) following the manufacturer's user guide. 20-50 ng DNA was used to prepare the libraries. The samples underwent the simultaneous fragmentation and addition of adapter sequences. These adapters are utilized during a limited-cycle PCR in which unique indices were added to the sample. Following the library preparation, the final concentration of the libraries were measured using the Qubit dsDNA HS assay kit, and the average library size was determined using the Agilent 2100 Bioanalyzer (Agilent Technologies). The libraries were then pooled in equimolar ratios of 0.6nM, and sequenced paired end (2 x 150 bp) for 300 cycles using the Illumina NovaSeq 6000 system SRS15765372 Rhizosphere soil S3 WGS METAGENOMIC PCR Illumina NovaSeq 6000 SRX18272193 S4 SRP408035 bp0 The libraries were prepared using Illumina DNA Prep, (M) Tagmentation library preparation kit (Illumina) following the manufacturer's user guide. 20-50 ng DNA was used to prepare the libraries. The samples underwent the simultaneous fragmentation and addition of adapter sequences. These adapters are utilized during a limited-cycle PCR in which unique indices were added to the sample. Following the library preparation, the final concentration of the libraries were measured using the Qubit dsDNA HS assay kit, and the average library size was determined using the Agilent 2100 Bioanalyzer (Agilent Technologies). The libraries were then pooled in equimolar ratios of 0.6nM, and sequenced paired end (2 x 150 bp) for 300 cycles using the Illumina NovaSeq 6000 system SRS15765372 Rhizosphere soil S4 WGS METAGENOMIC PCR Illumina NovaSeq 6000 SRX18272194 S SRP408035 bp0 The libraries were prepared using Illumina DNA Prep, (M) Tagmentation library preparation kit (Illumina) following the manufacturer's user guide. 20-50 ng DNA was used to prepare the libraries. The samples underwent the simultaneous fragmentation and addition of adapter sequences. These adapters are utilized during a limited-cycle PCR in which unique indices were added to the sample. Following the library preparation, the final concentration of the libraries were measured using the Qubit dsDNA HS assay kit, and the average library size was determined using the Agilent 2100 Bioanalyzer (Agilent Technologies). The libraries were then pooled in equimolar ratios of 0.6nM, and sequenced paired end (2 x 150 bp) for 300 cycles using the Illumina NovaSeq 6000 system SRS15765373 Bulk soil S WGS METAGENOMIC PCR Illumina NovaSeq 6000