<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT accession="SRX18301362" alias="HM3">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX18301362</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB12292556">HM3</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>scRNA-Seq of Mus musculus lymph node</TITLE>
    <STUDY_REF accession="SRP408513">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP408513</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB12292556">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Tumors or lymph nodes were dissociated and processed into single cell suspensions and sort-purified: P1: Tetramer+CD45+CD3+ (Antigen specific T-cells), P2: CD45+CD3+Tetramer- (polyclonal T-cells), P3: CD45+CD3− (Non-T-cell immune cells), and P4: CD45-. P1, P2, P3, and P4 were mixed at a 2:1:1:1 ratio and cells were encapsulated into droplets using 10x Chromium GEM and libraries prepared using the Single Cell 5′ Reagent Kit version 2.0 (10x Genomics) prior to sequencing using a NovaSeq instrument, as previously described (81).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS15792216">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS15792216</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|gmicevic">FM1</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>HM3</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC SINGLE CELL</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>HiSeq X Ten</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
