SRX18356049 CnmeGV-24hpi SRP359352 PRJNA805352 DNA library was constructed following the manufacturers instructions (Illumina, San Diego, CA, U.S.). We selected the paired-end (PE) library with 350 bp insertsize. All the samples were sequenced by the PE150 (2150) protocol on the Illumina Novaseq 6000 SRS11963862 SAMN25854939 CnmeGV-24hpi WGS METAGENOMIC cDNA Illumina NovaSeq 6000 SRX18356050 CnmeGV-48hpi SRP359352 PRJNA805352 DNA library was constructed following the manufacturers instructions (Illumina, San Diego, CA, U.S.). We selected the paired-end (PE) library with 350 bp insertsize. All the samples were sequenced by the PE150 (2150) protocol on the Illumina Novaseq 6000 SRS11963862 SAMN25854939 CnmeGV-48hpi WGS METAGENOMIC cDNA Illumina NovaSeq 6000 SRX18356051 CnmeGV-72hpi SRP359352 PRJNA805352 DNA library was constructed following the manufacturers instructions (Illumina, San Diego, CA, U.S.). We selected the paired-end (PE) library with 350 bp insertsize. All the samples were sequenced by the PE150 (2150) protocol on the Illumina Novaseq 6000 SRS11963862 SAMN25854939 CnmeGV-72hpi WGS METAGENOMIC cDNA Illumina NovaSeq 6000 SRX18356052 CK-24hpi SRP359352 PRJNA805352 DNA library was constructed following the manufacturers instructions (Illumina, San Diego, CA, U.S.). We selected the paired-end (PE) library with 350 bp insertsize. All the samples were sequenced by the PE150 (2150) protocol on the Illumina Novaseq 6000 SRS11963862 SAMN25854939 CK-24hpi WGS METAGENOMIC cDNA Illumina NovaSeq 6000 SRX18356053 CK-48hpi SRP359352 PRJNA805352 DNA library was constructed following the manufacturers instructions (Illumina, San Diego, CA, U.S.). We selected the paired-end (PE) library with 350 bp insertsize. All the samples were sequenced by the PE150 (2150) protocol on the Illumina Novaseq 6000 SRS11963862 SAMN25854939 CK-48hpi WGS METAGENOMIC cDNA Illumina NovaSeq 6000 SRX18356054 CK-72hpi SRP359352 PRJNA805352 DNA library was constructed following the manufacturers instructions (Illumina, San Diego, CA, U.S.). We selected the paired-end (PE) library with 350 bp insertsize. All the samples were sequenced by the PE150 (2150) protocol on the Illumina Novaseq 6000 SRS11963862 SAMN25854939 CK-72hpi WGS METAGENOMIC cDNA Illumina NovaSeq 6000