CDC Sars CoV2 Sequencing Baseline Constellation

SRS16169015 SAMN31847804 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428224/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.2.14 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169016 SAMN31847803 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428225/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BF.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169017 SAMN31847802 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428229/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169018 SAMN31847801 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428231/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169019 SAMN31847800 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428233/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.2.34 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169020 SAMN31847139 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/WI-CDC-QDX43428235/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 65 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169021 SAMN31847799 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428236/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name CK.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169022 SAMN31847138 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/WI-CDC-QDX43428240/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BL.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169023 SAMN31847798 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428241/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169024 SAMN31847797 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428247/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169025 SAMN31847796 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428248/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169026 SAMN31847490 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428249/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 74 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BF.32 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169027 SAMN31847489 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428251/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BF.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169028 SAMN31847488 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428255/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169029 SAMN31847487 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428256/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169030 SAMN31847486 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428257/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.1.27 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169031 SAMN31847485 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428258/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169032 SAMN31847484 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428260/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BQ.1.1.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169033 SAMN31847483 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428261/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BQ.1.14 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169034 SAMN31847741 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MI-CDC-QDX43428263/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Michigan host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169035 SAMN31847740 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MI-CDC-QDX43428264/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Michigan host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169036 SAMN31847739 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MI-CDC-QDX43428265/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Michigan host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169037 SAMN31847482 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428266/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169038 SAMN31847771 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/KY-CDC-QDX43428272/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Kentucky host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169039 SAMN31847481 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428274/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BF.7.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169040 SAMN31847480 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428275/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 71 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169041 SAMN31847738 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MI-CDC-QDX43428280/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Michigan host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169042 SAMN31847737 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MI-CDC-QDX43428281/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Michigan host Homo sapiens host_disease COVID-19 host_sex male host_age 80 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169043 SAMN31847727 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MI-CDC-QDX43428353/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Michigan host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169044 SAMN31847726 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MI-CDC-QDX43428354/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Michigan host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race BLACK OR AFR AM collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BQ.1.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169045 SAMN31847596 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43428360/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169046 SAMN31847937 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473797/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169047 SAMN31847936 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473798/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex female host_age 82 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169048 SAMN31847935 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473801/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169049 SAMN31847934 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473802/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169050 SAMN31847933 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473803/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex male host_age 76 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 16 lineage/clade name BQ.1.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169051 SAMN31847932 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473804/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 16 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169052 SAMN31847931 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473808/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 19 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169053 SAMN31847930 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473809/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex female host_age 68 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 19 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169054 SAMN31847929 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473810/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.2.3.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169055 SAMN31847928 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473812/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 20 lineage/clade name BF.7.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169056 SAMN31847927 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473813/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 15 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169057 SAMN31847926 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473814/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169058 SAMN31847925 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473816/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169059 SAMN31847924 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473817/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 25 lineage/clade name BQ.1.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169060 SAMN31847923 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473818/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169061 SAMN31847922 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473819/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169062 SAMN31847921 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473820/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169063 SAMN31847920 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473821/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex female host_age 68 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 16 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169064 SAMN31847919 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473822/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.1.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169065 SAMN31847918 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473823/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 16 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169066 SAMN31847917 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473824/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169067 SAMN31847916 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473825/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 22 lineage/clade name BQ.1.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169068 SAMN31847779 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43473827/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 15 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169069 SAMN31847915 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473828/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 14 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169070 SAMN31847914 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473829/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 22 lineage/clade name BQ.1.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169071 SAMN31847410 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/SC-CDC-QDX43385496/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: South Carolina host Homo sapiens host_disease COVID-19 host_sex male host_age 74 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.4.6.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169072 SAMN31847705 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43385500/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex male host_age 61 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169073 SAMN31847704 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43385523/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169074 SAMN31847703 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43385528/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.7.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169075 SAMN31847702 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43385529/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex male host_age 62 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.7.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169076 SAMN31847409 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/SC-CDC-QDX43385546/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: South Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BN.1.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169077 SAMN31847400 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TN-CDC-QDX43385556/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: Tennessee host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1.27 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169078 SAMN31847684 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43385566/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 81 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169079 SAMN31847701 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43386515/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.7.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169080 SAMN31847866 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CO-CDC-QDX43386521/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name CD.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169081 SAMN31847725 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43386523/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex female host_age 76 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169082 SAMN31847820 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43386528/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169083 SAMN31847724 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43386530/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex female host_age 68 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BF.7.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169084 SAMN31847819 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43386532/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169085 SAMN31847723 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43386541/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex male host_age 63 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BF.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169086 SAMN31847722 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43386546/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BE.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169087 SAMN31847721 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43386548/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex female host_age 74 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169088 SAMN31847720 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43386553/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169089 SAMN31847719 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43386554/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BQ.1.8 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169090 SAMN31847778 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/KS-CDC-QDX43386560/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Kansas host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169091 SAMN31847818 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43386562/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169092 SAMN31847817 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43386564/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 58 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.6.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169093 SAMN31847718 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43386585/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex male host_age 85 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169094 SAMN31847717 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43386588/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BF.7.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169095 SAMN31847716 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43386596/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169096 SAMN31847715 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43386601/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169097 SAMN31847186 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/UT-CDC-QDX43386869/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Utah host Homo sapiens host_disease COVID-19 host_sex male host_age 70 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169098 SAMN31847185 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/UT-CDC-QDX43386874/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Utah host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169099 SAMN31847673 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427028/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169100 SAMN31847672 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427029/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex male host_age 65 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BQ.1.13 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169101 SAMN31847454 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43427030/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 26 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169102 SAMN31847671 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427032/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex male host_age 0 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169103 SAMN31847584 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427035/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BE.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169104 SAMN31847583 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427036/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BF.7.8 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169105 SAMN31847670 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427037/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169106 SAMN31847582 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427041/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BF.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169107 SAMN31847453 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43427043/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 68 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BF.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169108 SAMN31847452 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43427044/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2.35 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169109 SAMN31847669 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427047/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169110 SAMN31847668 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427049/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 26 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169111 SAMN31847667 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427055/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 3 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.4.6.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169112 SAMN31847581 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427059/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name CK.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169113 SAMN31847580 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427061/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2.23 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169114 SAMN31847579 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427065/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 24 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169115 SAMN31847578 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427066/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 76 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 24 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169116 SAMN31847666 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427070/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 77 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169117 SAMN31847665 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427071/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169118 SAMN31847451 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43427072/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.1.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169119 SAMN31847450 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43427079/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 56 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169120 SAMN31847577 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427085/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1.14 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169121 SAMN31847576 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427086/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 70 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169122 SAMN31847664 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427091/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169123 SAMN31847449 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43427101/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age 12 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169124 SAMN31847575 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427103/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 24 lineage/clade name CM.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169125 SAMN31847574 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427104/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 70 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 22 lineage/clade name BF.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169126 SAMN31847573 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427106/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1.1.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169127 SAMN31847846 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43385442/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex female host_age 70 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169128 SAMN31847411 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/SC-CDC-QDX43385472/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: South Carolina host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.9 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169129 SAMN31847845 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43385486/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex male host_age 54 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169130 SAMN31847844 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43385490/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169131 SAMN31847616 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427989/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 65 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1.23 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169132 SAMN31847615 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427990/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169133 SAMN31847614 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427991/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169134 SAMN31847613 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427992/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.23 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169135 SAMN31847612 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427993/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.23 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169136 SAMN31847611 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427994/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169137 SAMN31847610 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427995/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169138 SAMN31847609 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427996/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169139 SAMN31847608 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427997/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169140 SAMN31847607 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427999/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.9 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169141 SAMN31847606 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43428001/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.9 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169142 SAMN31847605 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43428002/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169143 SAMN31847604 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43428003/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.13 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169144 SAMN31847603 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43428004/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.23 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169145 SAMN31847602 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43428009/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 58 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.2.3.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169146 SAMN31847601 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43428011/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 66 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169147 SAMN31847600 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43428013/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.14 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169148 SAMN31847599 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43428016/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name CP.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169149 SAMN31847598 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43428017/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race BLACK OR AFR AM collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169150 SAMN31847597 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43428022/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race OTHER RACE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.9 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169151 SAMN31847856 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/FL-CDC-QDX43428034/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BQ.1.15 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169152 SAMN31847855 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/FL-CDC-QDX43428035/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BQ.1.15 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169153 SAMN31847854 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/FL-CDC-QDX43428048/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex female host_age 86 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BF.11.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169154 SAMN31847853 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/FL-CDC-QDX43428067/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 70 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 13 lineage/clade name BF.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169155 SAMN31847531 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428074/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 80 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169156 SAMN31847530 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428075/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BE.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169157 SAMN31847528 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428077/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169158 SAMN31847529 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428076/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169159 SAMN31847434 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428119/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169160 SAMN31847433 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428120/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169161 SAMN31847515 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428121/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.2.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169162 SAMN31847432 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428122/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 72 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1.15 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169163 SAMN31847431 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428124/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BF.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169164 SAMN31847514 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428125/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 58 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169165 SAMN31847541 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43428126/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169166 SAMN31847513 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428127/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BE.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169167 SAMN31847512 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428128/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169168 SAMN31847511 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428130/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 14 lineage/clade name BA.5.2.21 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169169 SAMN31847510 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428131/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 69 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169170 SAMN31847509 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428132/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BQ.1.1.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169171 SAMN31847508 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428133/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 69 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169172 SAMN31847507 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428134/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 72 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.5.2.9 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169173 SAMN31847506 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428135/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2.34 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169174 SAMN31847505 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428136/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 77 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BF.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169175 SAMN31847504 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428137/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169176 SAMN31847503 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428138/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169177 SAMN31847430 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428139/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race BLACK OR AFR AM collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BE.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169178 SAMN31847429 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428140/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 74 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169179 SAMN31847502 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428141/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BA.5.2.21 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169180 SAMN31847501 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428142/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 62 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BN.1.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169181 SAMN31847500 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428143/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 69 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.1.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169182 SAMN31847499 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428144/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BQ.1.13 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169183 SAMN31847498 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428145/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BQ.1.8 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169184 SAMN31847497 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428146/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BF.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169185 SAMN31847428 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428147/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169186 SAMN31847496 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428148/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.2.75.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169187 SAMN31847742 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43474113/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex male host_age 64 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.1.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169188 SAMN31847648 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43474122/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 16 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169189 SAMN31847646 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43474172/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex male host_age 58 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169190 SAMN31847647 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43474170/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169191 SAMN31847243 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474190/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169192 SAMN31847242 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474191/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 68 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169193 SAMN31847241 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474192/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169194 SAMN31847240 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474193/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BQ.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169195 SAMN31847239 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474196/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169196 SAMN31847238 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474198/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 66 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169197 SAMN31847237 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474200/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 72 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169198 SAMN31847236 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474201/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BF.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169199 SAMN31847235 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474202/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169200 SAMN31847234 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474203/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169201 SAMN31847233 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474204/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 64 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BF.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169202 SAMN31847232 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474205/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169203 SAMN31847231 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474206/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169204 SAMN31847230 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474207/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BF.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169205 SAMN31847229 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474208/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 62 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BQ.1.1.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169206 SAMN31847228 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474209/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169207 SAMN31847227 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474210/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name CK.2.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169208 SAMN31847226 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474211/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169209 SAMN31847225 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474212/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 58 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BF.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169210 SAMN31847224 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474214/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169211 SAMN31847223 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474215/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.5.2.34 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169212 SAMN31847222 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474216/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BF.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169213 SAMN31847221 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474217/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169214 SAMN31847220 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474218/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169215 SAMN31847193 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474261/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BF.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169216 SAMN31847192 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474262/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169217 SAMN31847191 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474263/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BQ.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169218 SAMN31847190 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474266/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BF.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169219 SAMN31847189 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474268/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169220 SAMN31847188 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474269/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 15 lineage/clade name BA.5.1.27 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169221 SAMN31847187 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474270/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169222 SAMN31847869 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43474271/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169223 SAMN31847868 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43474272/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 16 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169224 SAMN31847867 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43474273/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 61 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 25 lineage/clade name CR.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169225 SAMN31847461 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OR-CDC-QDX43474274/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 14 lineage/clade name BA.5.2.9 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169226 SAMN31847537 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43474278/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 16 lineage/clade name CA.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169227 SAMN31847637 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NM-CDC-QDX43474286/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race OTHER RACE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169228 SAMN31847848 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/FL-CDC-QDX43474292/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex male host_age 71 host_race UNKNOWN collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BF.31 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169229 SAMN31847476 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43474327/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169230 SAMN31847475 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43474328/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2.21 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169231 SAMN31847474 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43474330/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169232 SAMN31847473 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43474332/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 85 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2.35 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169233 SAMN31847472 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43474337/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BQ.1.1.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169234 SAMN31847471 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43474338/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169235 SAMN31847470 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43474340/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169236 SAMN31847469 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43474341/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169237 SAMN31847468 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43474342/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169238 SAMN31847467 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43474344/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169239 SAMN31847466 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43474345/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 26 lineage/clade name BQ.1.13 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169240 SAMN31847420 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43474346/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169241 SAMN31847419 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43474348/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169242 SAMN31847418 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43474349/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169243 SAMN31847306 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427426/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.1.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169244 SAMN31847305 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427427/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169245 SAMN31847304 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427429/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169246 SAMN31847824 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/HI-CDC-QDX43427434/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Hawaii host Homo sapiens host_disease COVID-19 host_sex female host_age 3 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169247 SAMN31847906 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427441/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.27 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169248 SAMN31847823 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/HI-CDC-QDX43427435/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Hawaii host Homo sapiens host_disease COVID-19 host_sex female host_age 10 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169249 SAMN31847905 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427449/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169250 SAMN31847904 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427454/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BN.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169251 SAMN31847903 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427462/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169252 SAMN31847902 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427464/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169253 SAMN31847901 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427492/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169254 SAMN31847900 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427495/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name CM.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169255 SAMN31847899 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427505/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169256 SAMN31847898 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427530/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169257 SAMN31847897 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427531/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.35 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169258 SAMN31847896 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427550/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169259 SAMN31847895 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427554/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169260 SAMN31847894 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427555/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169261 SAMN31847893 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427559/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169262 SAMN31847892 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427561/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169263 SAMN31847891 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427567/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BE.1.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169264 SAMN31847889 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427583/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 71 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169265 SAMN31847890 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427577/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 59 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BN.1.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169266 SAMN31847888 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427590/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 59 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169267 SAMN31847887 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427613/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 64 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BQ.1.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169268 SAMN31847886 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427619/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race BLACK OR AFR AM collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169269 SAMN31847885 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427638/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169270 SAMN31847884 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427659/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.19 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169271 SAMN31847913 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473832/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 15 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169272 SAMN31847912 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473833/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 24 lineage/clade name BQ.1.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169273 SAMN31847911 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473835/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 24 lineage/clade name BQ.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169274 SAMN31847910 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473836/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex female host_age 90 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 13 lineage/clade name BF.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169275 SAMN31847909 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473838/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.1.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169276 SAMN31847908 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473840/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex male host_age 0 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 16 lineage/clade name BQ.1.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169277 SAMN31847907 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AZ-CDC-QDX43473842/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Arizona host Homo sapiens host_disease COVID-19 host_sex female host_age 66 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 LDT diagnostic_pcr_Ct_value_1 16 lineage/clade name BN.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169278 SAMN31847643 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NM-CDC-QDX43473848/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race AM IND ALSK NTV collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169279 SAMN31847641 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NM-CDC-QDX43473850/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex female host_age 0 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169280 SAMN31847642 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NM-CDC-QDX43473849/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex female host_age 11 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.2.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169281 SAMN31847640 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NM-CDC-QDX43473853/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169282 SAMN31847639 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NM-CDC-QDX43473856/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169283 SAMN31847638 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NM-CDC-QDX43473857/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex female host_age 68 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BF.14 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169284 SAMN31847656 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43473982/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 64 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169285 SAMN31847657 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43473968/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169286 SAMN31847655 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43473991/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 58 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169287 SAMN31847654 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43474001/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169288 SAMN31847652 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43474003/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169289 SAMN31847653 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43474002/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 26 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169290 SAMN31847748 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43474008/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169291 SAMN31847747 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43474030/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 22 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169292 SAMN31847745 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43474051/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169293 SAMN31847746 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43474050/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169294 SAMN31847651 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43474075/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 69 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BF.7.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169295 SAMN31847650 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43474076/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169296 SAMN31847649 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43474079/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169297 SAMN31847744 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43474086/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex male host_age 71 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1.14 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169298 SAMN31847743 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43474088/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.2.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169299 SAMN31847184 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/UT-CDC-QDX43386875/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Utah host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BF.32 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169300 SAMN31847183 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/UT-CDC-QDX43386883/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Utah host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169301 SAMN31847182 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/UT-CDC-QDX43386891/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Utah host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169302 SAMN31847940 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AL-CDC-QDX43426712/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: Alabama host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race BLACK OR AFR AM collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169303 SAMN31847645 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NM-CDC-QDX43426710/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169304 SAMN31847843 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426718/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169305 SAMN31847842 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426721/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BN.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169306 SAMN31847841 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426725/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169307 SAMN31847840 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426727/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169308 SAMN31847839 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426729/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex female host_age 81 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169309 SAMN31847838 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426731/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BN.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169310 SAMN31847837 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426734/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex female host_age 72 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169311 SAMN31847700 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43426737/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169312 SAMN31847835 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426742/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169313 SAMN31847836 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426740/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.7.4.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169314 SAMN31847408 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/SC-CDC-QDX43426745/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: South Carolina host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169315 SAMN31847834 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426748/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169316 SAMN31847833 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426749/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BN.1.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169317 SAMN31847832 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426751/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169318 SAMN31847407 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/SC-CDC-QDX43426756/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: South Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1.27 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169319 SAMN31847699 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43426758/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 80 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169320 SAMN31847698 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43426759/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 64 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169321 SAMN31847697 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43426760/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.7.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169322 SAMN31847406 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/SC-CDC-QDX43426762/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: South Carolina host Homo sapiens host_disease COVID-19 host_sex male host_age 61 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169323 SAMN31847405 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/SC-CDC-QDX43426763/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: South Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 70 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169324 SAMN31847696 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43426767/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.23 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169325 SAMN31847695 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43426768/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 63 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.23 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169326 SAMN31847404 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/SC-CDC-QDX43426770/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: South Carolina host Homo sapiens host_disease COVID-19 host_sex male host_age 74 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name CH.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169327 SAMN31847594 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43426923/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169328 SAMN31847593 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43426928/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169329 SAMN31847592 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43426931/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169330 SAMN31847591 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43426933/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169331 SAMN31847590 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43426934/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169332 SAMN31847589 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43426935/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169333 SAMN31847588 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43426938/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BF.32 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169334 SAMN31847157 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426954/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 81 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169335 SAMN31847156 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426956/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 82 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name CL.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169336 SAMN31847155 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426957/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 78 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169337 SAMN31847154 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426958/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BA.5.2.22 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169338 SAMN31847153 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426959/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169339 SAMN31847682 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43426960/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BF.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169340 SAMN31847152 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426961/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169341 SAMN31847151 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426962/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169342 SAMN31847150 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426963/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex male host_age 72 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BF.7.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169343 SAMN31847149 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426969/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169344 SAMN31847681 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43426993/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race BLACK OR AFR AM collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BE.4.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169345 SAMN31847680 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43426999/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169346 SAMN31847679 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427000/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2.23 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169347 SAMN31847678 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427007/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169348 SAMN31847676 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427012/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex male host_age 70 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169349 SAMN31847677 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427009/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex male host_age 54 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.2.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169350 SAMN31847675 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427013/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169351 SAMN31847674 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427014/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BF.14 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169352 SAMN31847587 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427019/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BQ.1.1.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169353 SAMN31847586 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427020/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169354 SAMN31847585 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427025/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.1.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169355 SAMN31847555 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427187/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 22 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169356 SAMN31847442 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43427195/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169357 SAMN31847658 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427201/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex male host_age 68 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 16 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169358 SAMN31847554 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427206/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BM.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169359 SAMN31847553 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427208/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169360 SAMN31847552 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427210/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 16 lineage/clade name BQ.1.1.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169361 SAMN31847148 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43427221/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169362 SAMN31847147 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43427226/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169363 SAMN31847146 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43427227/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2.34 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169364 SAMN31847145 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43427229/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 73 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169365 SAMN31847144 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43427232/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.2.9 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169366 SAMN31847750 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43427233/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 25 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169367 SAMN31847143 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43427255/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169368 SAMN31847142 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43427260/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169369 SAMN31847141 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43427265/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex male host_age 64 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169370 SAMN31847749 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43427285/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BN.1.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169371 SAMN31847140 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43427287/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex male host_age 62 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 14 lineage/clade name BQ.1.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169372 SAMN31847551 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427289/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race BLACK OR AFR AM collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169373 SAMN31847398 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427297/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169374 SAMN31847399 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427296/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BA.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169375 SAMN31847397 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427298/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.2.75.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169376 SAMN31847395 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427301/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169377 SAMN31847396 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427300/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BA.5.2.35 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169378 SAMN31847393 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427304/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BA.2.75.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169379 SAMN31847394 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427303/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 84 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BQ.1.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169380 SAMN31847392 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427305/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169381 SAMN31847391 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427306/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.4.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169382 SAMN31847390 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427307/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169383 SAMN31847361 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427343/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169384 SAMN31847360 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427344/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BQ.1.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169385 SAMN31847359 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427346/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BF.7.4.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169386 SAMN31847358 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427347/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169387 SAMN31847357 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427348/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169388 SAMN31847356 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427349/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 69 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 15 lineage/clade name BA.5.2.22 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169389 SAMN31847355 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427350/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 70 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.5.2.22 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169390 SAMN31847354 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427356/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169391 SAMN31847353 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427358/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169392 SAMN31847352 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427359/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BW.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169393 SAMN31847351 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427361/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169394 SAMN31847350 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427365/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BN.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169395 SAMN31847349 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427367/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BF.8 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169396 SAMN31847348 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427368/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169397 SAMN31847347 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427369/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race BLACK OR AFR AM collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169398 SAMN31847346 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427370/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BQ.1.1.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169399 SAMN31847345 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427371/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2.34 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169400 SAMN31847344 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427373/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169401 SAMN31847343 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427374/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 56 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name CD.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169402 SAMN31847342 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427375/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BQ.1.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169403 SAMN31847341 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427376/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 26 lineage/clade name CM.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169404 SAMN31847340 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427377/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 68 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169405 SAMN31847339 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427378/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169406 SAMN31847338 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427380/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race UNKNOWN collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.4.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169407 SAMN31847337 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427381/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169408 SAMN31847336 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427382/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169409 SAMN31847335 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427383/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169410 SAMN31847334 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427385/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169411 SAMN31847883 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427662/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.28 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169412 SAMN31847882 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427664/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.27 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169413 SAMN31847881 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427675/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169414 SAMN31847880 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427676/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169415 SAMN31847879 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427678/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169416 SAMN31847878 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427680/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169417 SAMN31847877 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427681/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1.27 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169418 SAMN31847876 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427683/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169419 SAMN31847875 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427691/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169420 SAMN31847874 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427695/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169421 SAMN31847822 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/HI-CDC-QDX43427699/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Hawaii host Homo sapiens host_disease COVID-19 host_sex female host_age 68 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169422 SAMN31847873 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427700/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169423 SAMN31847821 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/HI-CDC-QDX43427703/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Hawaii host Homo sapiens host_disease COVID-19 host_sex male host_age 68 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169424 SAMN31847872 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427705/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169425 SAMN31847871 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427708/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race OTHER RACE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169426 SAMN31847870 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CA-CDC-QDX43427712/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169427 SAMN31847688 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43427727/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1.22 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169428 SAMN31847687 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43427728/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169429 SAMN31847686 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43427729/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169430 SAMN31847685 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43427732/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169431 SAMN31847303 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427737/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169432 SAMN31847302 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427738/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BE.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169433 SAMN31847301 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427742/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BN.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169434 SAMN31847300 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427744/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 85 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.32 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169435 SAMN31847299 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427745/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169436 SAMN31847298 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427746/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169437 SAMN31847297 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427748/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169438 SAMN31847296 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427751/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.13 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169439 SAMN31847270 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427819/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 72 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169440 SAMN31847269 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427820/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169441 SAMN31847268 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427822/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169442 SAMN31847267 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427823/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169443 SAMN31847266 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427825/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169444 SAMN31847265 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427826/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169445 SAMN31847264 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427827/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 58 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.35 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169446 SAMN31847767 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/LA-CDC-QDX43427833/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Louisiana host Homo sapiens host_disease COVID-19 host_sex male host_age 76 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169447 SAMN31847766 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/LA-CDC-QDX43427836/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Louisiana host Homo sapiens host_disease COVID-19 host_sex male host_age 83 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169448 SAMN31847263 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427837/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name CM.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169449 SAMN31847262 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427841/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169450 SAMN31847261 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427842/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169451 SAMN31847260 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427845/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169452 SAMN31847259 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427848/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169453 SAMN31847258 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427849/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169454 SAMN31847257 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427850/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169455 SAMN31847256 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427851/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 71 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.32 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169456 SAMN31847255 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427853/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169457 SAMN31847254 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427855/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169458 SAMN31847253 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427856/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 84 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169459 SAMN31847252 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427859/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169460 SAMN31847251 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427860/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169461 SAMN31847250 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427861/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169462 SAMN31847249 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427862/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169463 SAMN31847765 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/LA-CDC-QDX43427867/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Louisiana host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169464 SAMN31847764 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/LA-CDC-QDX43427868/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Louisiana host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169465 SAMN31847248 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427870/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 75 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169466 SAMN31847247 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427871/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169467 SAMN31847219 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474219/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169468 SAMN31847218 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474220/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169469 SAMN31847763 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/LA-CDC-QDX43474221/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Louisiana host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BF.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169470 SAMN31847217 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474222/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BE.1.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169471 SAMN31847216 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474226/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.2.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169472 SAMN31847215 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474227/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169473 SAMN31847214 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474228/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169474 SAMN31847213 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474230/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 13 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169475 SAMN31847212 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474232/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 68 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169476 SAMN31847211 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474233/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BF.7.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169477 SAMN31847210 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474235/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 13 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169478 SAMN31847209 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474236/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169479 SAMN31847208 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474237/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.2.9 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169480 SAMN31847207 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474239/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169481 SAMN31847206 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474240/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BQ.1.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169482 SAMN31847762 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/LA-CDC-QDX43474241/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Louisiana host Homo sapiens host_disease COVID-19 host_sex female host_age 69 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 15 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169483 SAMN31847205 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474242/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 65 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BQ.1.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169484 SAMN31847204 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474244/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169485 SAMN31847203 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474248/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.14 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169486 SAMN31847202 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474250/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169487 SAMN31847201 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474251/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169488 SAMN31847200 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474252/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169489 SAMN31847199 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474254/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169490 SAMN31847198 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474255/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 71 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169491 SAMN31847197 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474256/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 78 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BN.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169492 SAMN31847196 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474258/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BQ.1.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169493 SAMN31847195 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474259/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169494 SAMN31847194 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43474260/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 26 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169495 SAMN31847417 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43474351/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BF.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169496 SAMN31847416 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43474352/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BF.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169497 SAMN31847465 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43474354/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 74 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169498 SAMN31847536 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43474355/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169499 SAMN31847535 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43474357/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169500 SAMN31847415 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43474358/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.2.21 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169501 SAMN31847414 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43474359/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169502 SAMN31847464 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43474360/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.1.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169503 SAMN31847534 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43474362/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169504 SAMN31847463 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43474363/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BF.7.4.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169505 SAMN31847413 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43474365/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169506 SAMN31847412 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43474366/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age 64 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169507 SAMN31847533 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43474368/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169508 SAMN31847462 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43474373/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BN.1.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169509 SAMN31847847 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/FL-CDC-QDX43474383/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-09 isolation_source Nasal Swabs geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex female host_age 82 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169510 SAMN31847389 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427308/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169511 SAMN31847388 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427309/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.4.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169512 SAMN31847387 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427310/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BN.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169513 SAMN31847386 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427311/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name CM.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169514 SAMN31847385 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427312/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 0 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169515 SAMN31847384 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427313/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 26 lineage/clade name BA.5.2.34 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169516 SAMN31847383 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427315/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BQ.1.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169517 SAMN31847382 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427316/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 75 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BQ.1.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169518 SAMN31847381 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427317/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BQ.1.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169519 SAMN31847380 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427319/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 64 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169520 SAMN31847379 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427320/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BE.1.4.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169521 SAMN31847378 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427322/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169522 SAMN31847377 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427325/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BQ.1.13 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169523 SAMN31847376 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427326/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169524 SAMN31847375 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427327/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BQ.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169525 SAMN31847374 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427328/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169526 SAMN31847373 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427329/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 59 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169527 SAMN31847372 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427330/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BF.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169528 SAMN31847371 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427331/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.2.34 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169529 SAMN31847370 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427333/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 62 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BF.14 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169530 SAMN31847369 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427334/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BQ.1.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169531 SAMN31847368 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427335/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169532 SAMN31847367 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427336/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2.34 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169533 SAMN31847366 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427337/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BF.7.4.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169534 SAMN31847365 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427338/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 74 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BN.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169535 SAMN31847364 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427340/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169536 SAMN31847363 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427341/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BQ.1.14 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169537 SAMN31847362 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427342/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BF.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169538 SAMN31847403 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/SC-CDC-QDX43426773/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: South Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169539 SAMN31847694 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43426775/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 80 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169540 SAMN31847831 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426778/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex male host_age 73 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169541 SAMN31847830 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426779/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169542 SAMN31847829 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426780/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169543 SAMN31847828 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426781/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race UNKNOWN collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169544 SAMN31847693 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43426782/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 63 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169545 SAMN31847402 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/SC-CDC-QDX43426790/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: South Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169546 SAMN31847692 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43426792/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169547 SAMN31847691 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43426803/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169548 SAMN31847401 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/SC-CDC-QDX43426804/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: South Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169549 SAMN31847827 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426808/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169550 SAMN31847690 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43426812/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169551 SAMN31847689 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NC-CDC-QDX43426813/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: North Carolina host Homo sapiens host_disease COVID-19 host_sex female host_age 0 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169552 SAMN31847826 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426815/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169553 SAMN31847825 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/GA-CDC-QDX43426821/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Georgia host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race UNKNOWN collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169554 SAMN31847532 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43426824/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.1.27 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169555 SAMN31847177 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426827/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169556 SAMN31847460 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43426831/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169557 SAMN31847683 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43426843/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 76 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BF.11.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169558 SAMN31847459 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43426845/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169559 SAMN31847458 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43426846/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race OTHER RACE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.5.1.23 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169560 SAMN31847457 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43426847/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 59 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169561 SAMN31847456 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43426848/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BF.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169562 SAMN31847176 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426850/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169563 SAMN31847761 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43426851/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169564 SAMN31847760 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43426853/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169565 SAMN31847759 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43426854/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex male host_age 67 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BQ.1.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169566 SAMN31847295 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427753/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.35 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169567 SAMN31847770 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/LA-CDC-QDX43427757/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: Louisiana host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169568 SAMN31847769 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/LA-CDC-QDX43427759/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: Louisiana host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169569 SAMN31847294 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427761/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 64 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169570 SAMN31847293 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427764/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169571 SAMN31847292 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427766/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169572 SAMN31847291 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427767/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169573 SAMN31847290 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427768/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169574 SAMN31847289 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427769/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169575 SAMN31847288 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427770/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 71 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169576 SAMN31847287 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427772/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name CP.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169577 SAMN31847286 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427773/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169578 SAMN31847768 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/LA-CDC-QDX43427779/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Louisiana host Homo sapiens host_disease COVID-19 host_sex female host_age 12 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169579 SAMN31847285 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427781/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169580 SAMN31847284 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427783/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169581 SAMN31847283 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427788/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 71 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169582 SAMN31847282 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427789/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169583 SAMN31847281 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427792/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BN.1.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169584 SAMN31847280 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427794/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169585 SAMN31847279 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427798/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169586 SAMN31847278 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427800/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169587 SAMN31847277 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427805/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name CD.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169588 SAMN31847276 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427806/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.9 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169589 SAMN31847275 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427810/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 0 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169590 SAMN31847274 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427811/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 1 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169591 SAMN31847273 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427813/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169592 SAMN31847272 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427817/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169593 SAMN31847271 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427818/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.13 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169594 SAMN31847427 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428149/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 59 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 26 lineage/clade name BF.7.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169595 SAMN31847426 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428150/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BE.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169596 SAMN31847495 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428151/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169597 SAMN31847425 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428152/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169598 SAMN31847424 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428153/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 74 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 26 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169599 SAMN31847423 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428154/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age 84 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BF.7.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169600 SAMN31847540 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43428155/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 66 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169601 SAMN31847539 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43428156/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BF.27 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169602 SAMN31847494 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428158/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 63 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169603 SAMN31847493 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428159/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 68 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BA.5.2.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169604 SAMN31847492 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428160/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BF.7.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169605 SAMN31847538 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43428161/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BF.27 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169606 SAMN31847422 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428162/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169607 SAMN31847491 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428164/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.2.21 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169608 SAMN31847421 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428165/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169609 SAMN31847181 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/UT-CDC-QDX43428166/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Utah host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2.21 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169610 SAMN31847180 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/UT-CDC-QDX43428168/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Utah host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169611 SAMN31847179 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/UT-CDC-QDX43428169/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Utah host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169612 SAMN31847178 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/UT-CDC-QDX43428170/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Utah host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169613 SAMN31847852 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/FL-CDC-QDX43428180/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2.19 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169614 SAMN31847851 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/FL-CDC-QDX43428189/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169615 SAMN31847850 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/FL-CDC-QDX43428197/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169616 SAMN31847849 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/FL-CDC-QDX43428201/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Florida host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169617 SAMN31847857 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CO-CDC-QDX43428207/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.15 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169618 SAMN31847808 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428211/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex male host_age 67 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BF.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169619 SAMN31847807 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428216/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169620 SAMN31847805 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428223/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex male host_age 58 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169621 SAMN31847806 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428219/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169622 SAMN31847758 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43426855/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169623 SAMN31847757 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43426859/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex male host_age 4 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BM.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169624 SAMN31847756 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43426861/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169625 SAMN31847755 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43426866/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex male host_age 82 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169626 SAMN31847175 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426867/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169627 SAMN31847174 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426869/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2.23 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169628 SAMN31847173 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426871/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BF.7.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169629 SAMN31847172 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426872/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 26 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169630 SAMN31847171 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426873/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169631 SAMN31847754 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43426877/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169632 SAMN31847753 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43426878/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BF.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169633 SAMN31847752 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43426879/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BF.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169634 SAMN31847170 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426880/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex male host_age 75 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BF.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169635 SAMN31847751 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MD-CDC-QDX43426883/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Maryland host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169636 SAMN31847169 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426881/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2.34 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169637 SAMN31847168 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426884/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169638 SAMN31847166 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426887/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name CK.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169639 SAMN31847167 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426885/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BF.7.4.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169640 SAMN31847165 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426888/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name CN.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169641 SAMN31847164 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426890/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169642 SAMN31847163 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426892/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169643 SAMN31847162 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426893/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169644 SAMN31847161 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426900/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2.34 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169645 SAMN31847160 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426904/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169646 SAMN31847159 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426906/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169647 SAMN31847158 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/VA-CDC-QDX43426912/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex male host_age 54 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BN.1.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169648 SAMN31847455 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43426913/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-03 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age 64 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BF.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169649 SAMN31847595 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43426916/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-04 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169650 SAMN31847572 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427108/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 70 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BE.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169651 SAMN31847571 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427109/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169652 SAMN31847570 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427110/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169653 SAMN31847569 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427111/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 56 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 23 lineage/clade name BN.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169654 SAMN31847568 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427112/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 24 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169655 SAMN31847567 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427113/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169656 SAMN31847566 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427114/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169657 SAMN31847565 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427117/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169658 SAMN31847564 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427118/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169659 SAMN31847563 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427119/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BE.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169660 SAMN31847562 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427125/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 79 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169661 SAMN31847561 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427128/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race UNKNOWN collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169662 SAMN31847560 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427135/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 26 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169663 SAMN31847559 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427136/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 67 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169664 SAMN31847663 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427138/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex male host_age 64 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169665 SAMN31847448 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43427144/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BF.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169666 SAMN31847447 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43427145/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name CK.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169667 SAMN31847446 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43427146/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169668 SAMN31847445 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43427147/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169669 SAMN31847444 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43427150/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169670 SAMN31847557 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427161/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169671 SAMN31847558 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427154/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169672 SAMN31847443 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43427163/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name CM.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169673 SAMN31847661 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427167/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.5.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169674 SAMN31847660 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427172/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169675 SAMN31847662 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427162/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169676 SAMN31847659 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NJ-CDC-QDX43427174/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name CL.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169677 SAMN31847556 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43427186/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 81 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169678 SAMN31847479 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428282/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169679 SAMN31847795 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428287/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169680 SAMN31847736 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MI-CDC-QDX43428286/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Michigan host Homo sapiens host_disease COVID-19 host_sex male host_age 61 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169681 SAMN31847794 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428292/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex male host_age 54 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169682 SAMN31847792 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428295/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name CK.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169683 SAMN31847793 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428294/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.4.1.8 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169684 SAMN31847791 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428296/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169685 SAMN31847790 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428301/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BN.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169686 SAMN31847735 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MI-CDC-QDX43428308/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Michigan host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.1.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169687 SAMN31847788 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428315/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 15 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169688 SAMN31847789 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428314/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169689 SAMN31847787 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428316/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 66 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169690 SAMN31847785 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428323/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169691 SAMN31847786 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428318/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169692 SAMN31847784 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428324/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.4.6.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169693 SAMN31847783 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428325/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169694 SAMN31847782 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428326/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BQ.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169695 SAMN31847781 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428327/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BE.1.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169696 SAMN31847780 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43428328/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 15 lineage/clade name BA.5.2.23 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169697 SAMN31847734 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MI-CDC-QDX43428330/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Michigan host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BQ.1.13 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169698 SAMN31847733 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MI-CDC-QDX43428332/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Michigan host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169699 SAMN31847478 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428334/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169700 SAMN31847477 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428335/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169701 SAMN31847732 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MI-CDC-QDX43428340/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Michigan host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169702 SAMN31847731 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MI-CDC-QDX43428342/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Michigan host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race BLACK OR AFR AM collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169703 SAMN31847730 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MI-CDC-QDX43428348/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Michigan host Homo sapiens host_disease COVID-19 host_sex female host_age 75 host_race BLACK OR AFR AM collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169704 SAMN31847729 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MI-CDC-QDX43428351/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Michigan host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BF.14 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169705 SAMN31847728 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MI-CDC-QDX43428352/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: Michigan host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race BLACK OR AFR AM collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169706 SAMN31847333 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427386/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2.34 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169707 SAMN31847332 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427387/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.2.34 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169708 SAMN31847331 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427389/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 77 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BN.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169709 SAMN31847330 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427390/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name CK.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169710 SAMN31847329 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427392/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name CA.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169711 SAMN31847328 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427393/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.5.2.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169712 SAMN31847327 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427394/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 63 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name CD.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169713 SAMN31847326 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427395/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 26 lineage/clade name BA.5.2.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169714 SAMN31847325 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427396/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169715 SAMN31847324 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427397/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BF.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169716 SAMN31847323 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427398/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169717 SAMN31847322 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427400/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 79 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169718 SAMN31847321 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427401/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race OTHER RACE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169719 SAMN31847320 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427402/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name CK.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169720 SAMN31847319 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427403/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 72 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BE.1.4.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169721 SAMN31847318 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427404/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169722 SAMN31847644 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NM-CDC-QDX43427405/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169723 SAMN31847317 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427408/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 61 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 15 lineage/clade name BF.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169724 SAMN31847315 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427411/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169725 SAMN31847316 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427410/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2.35 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169726 SAMN31847313 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427413/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 58 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.2.28 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169727 SAMN31847314 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427412/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169728 SAMN31847312 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427415/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 63 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2.34 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169729 SAMN31847311 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427418/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BF.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169730 SAMN31847310 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427421/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BF.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169731 SAMN31847309 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427422/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169732 SAMN31847308 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427424/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169733 SAMN31847307 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427425/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 58 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BQ.1.13 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169734 SAMN31847246 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427874/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169735 SAMN31847245 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427876/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169736 SAMN31847816 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43427880/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race BLACK OR AFR AM collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169737 SAMN31847865 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CO-CDC-QDX43427881/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BE.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169738 SAMN31847864 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CO-CDC-QDX43427882/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 0 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BE.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169739 SAMN31847863 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CO-CDC-QDX43427883/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BQ.1.1.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169740 SAMN31847815 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43427885/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.4.6.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169741 SAMN31847777 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/KS-CDC-QDX43427886/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Kansas host Homo sapiens host_disease COVID-19 host_sex female host_age 12 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BF.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169742 SAMN31847776 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/KS-CDC-QDX43427887/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Kansas host Homo sapiens host_disease COVID-19 host_sex female host_age 74 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169743 SAMN31847714 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43427888/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2.32 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169744 SAMN31847775 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/KS-CDC-QDX43427890/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Kansas host Homo sapiens host_disease COVID-19 host_sex male host_age 67 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169745 SAMN31847774 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/KS-CDC-QDX43427891/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Kansas host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169746 SAMN31847773 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/KS-CDC-QDX43427895/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Kansas host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169747 SAMN31847772 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/KS-CDC-QDX43427896/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Kansas host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 13 lineage/clade name BE.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169748 SAMN31847814 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43427897/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 63 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169749 SAMN31847862 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CO-CDC-QDX43427898/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169750 SAMN31847861 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CO-CDC-QDX43427900/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.2.22 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169751 SAMN31847859 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CO-CDC-QDX43427906/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex male host_age 58 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169752 SAMN31847860 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CO-CDC-QDX43427903/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 16 lineage/clade name BA.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169753 SAMN31847939 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AR-CDC-QDX43427909/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Arkansas host Homo sapiens host_disease COVID-19 host_sex male host_age 65 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169754 SAMN31847938 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/AR-CDC-QDX43427910/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Arkansas host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169755 SAMN31847858 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/CO-CDC-QDX43427911/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Colorado host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BN.1.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169756 SAMN31847713 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43427912/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169757 SAMN31847712 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43427914/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169759 SAMN31847244 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/TX-CDC-QDX43427918/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name CM.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169760 SAMN31847710 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43427921/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169761 SAMN31847813 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43427924/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BF.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169762 SAMN31847812 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43427925/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169763 SAMN31847811 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43427926/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 18 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169765 SAMN31847708 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43427930/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169767 SAMN31847810 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43427936/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169769 SAMN31847706 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43427942/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex female host_age 58 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BF.7.4.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169771 SAMN31847635 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427954/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race OTHER RACE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169773 SAMN31847634 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427958/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1.12 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169775 SAMN31847631 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427961/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 61 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169777 SAMN31847630 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427962/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 81 host_race OTHER RACE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169779 SAMN31847627 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427967/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169781 SAMN31847625 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427973/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.14 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169783 SAMN31847623 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427978/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 73 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BF.27 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169785 SAMN31847621 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427980/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race OTHER RACE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name CK.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169787 SAMN31847619 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427984/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race OTHER RACE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169789 SAMN31847617 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427986/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169791 SAMN31847526 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428081/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169793 SAMN31847524 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428083/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169795 SAMN31847441 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428086/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169797 SAMN31847439 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428088/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex female host_age 63 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169799 SAMN31847438 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428089/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169801 SAMN31847521 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428093/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169803 SAMN31847436 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428096/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169805 SAMN31847519 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428099/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169807 SAMN31847550 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43428102/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name CJ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169809 SAMN31847548 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43428107/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169758 SAMN31847711 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43427915/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.1.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169764 SAMN31847709 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43427927/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BF.7.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169766 SAMN31847707 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/MO-CDC-QDX43427933/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Missouri host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BF.28 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169768 SAMN31847809 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/IL-CDC-QDX43427939/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Illinois host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BA.5.1.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169770 SAMN31847636 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427948/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 74 host_race OTHER RACE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169772 SAMN31847633 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427959/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race BLACK OR AFR AM collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BN.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169774 SAMN31847632 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427960/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race OTHER RACE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169776 SAMN31847629 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427965/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 58 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169778 SAMN31847628 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427966/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 58 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169780 SAMN31847626 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427971/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 76 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.1.18 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169782 SAMN31847624 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427976/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169784 SAMN31847622 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427979/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169786 SAMN31847620 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427981/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169788 SAMN31847618 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NV-CDC-QDX43427985/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-08 isolation_source Nasal Swabs geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Hologic diagnostic_pcr_Ct_value_1 Unknown lineage/clade name BQ.1.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169790 SAMN31847527 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428080/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BA.5.2.35 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169792 SAMN31847525 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428082/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BQ.1.17 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169794 SAMN31847523 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428084/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 22 lineage/clade name BE.1.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169796 SAMN31847440 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428087/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 67 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169798 SAMN31847437 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428091/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 24 lineage/clade name BQ.1.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169800 SAMN31847522 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428092/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 20 lineage/clade name BA.5.1.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169802 SAMN31847520 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428095/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169804 SAMN31847435 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/PA-CDC-QDX43428097/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169806 SAMN31847518 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428100/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-05 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 19 lineage/clade name BA.5.2.14 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169808 SAMN31847549 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43428104/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BF.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169810 SAMN31847547 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43428111/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169811 SAMN31847546 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43428112/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BQ.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169812 SAMN31847545 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43428113/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 25 lineage/clade name BA.5.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169813 SAMN31847544 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43428114/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 21 lineage/clade name BQ.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169814 SAMN31847543 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43428115/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.4.6 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169815 SAMN31847542 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/NY-CDC-QDX43428116/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-06 isolation_source Nasal Swabs geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race WHITE collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.5.2.13 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169816 SAMN31847517 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428117/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 26 lineage/clade name BA.5.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS16169817 SAMN31847516 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 716985 PRJNA716985 Isolate SARS-CoV-2/Human/USA/OH-CDC-QDX43428118/2022 collected_by Quest Diagnostics Incorporated collection_date 2022-11-07 isolation_source Nasal Swabs geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race Unknown collection_device Nasal Swabs collection_method Nasal Swabs purpose_of_sequencing baseline surveillance (random sampling) diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 23 lineage/clade name BA.5.2.6 BioSampleModel SARS-CoV-2: clinical or host-associated