SRS15909323 SAMN31937300 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 764553 PRJNA764553 collected_by Clinical Lab, Aga Khan University Hospital collection_date 2022-09-01 geo_loc_name Pakistan: Karachi host Homo sapiens host_disease COVID-19 isolate 77163 isolation_source nasal swab collection_device Sterile Dacron Swab gisaid_virus_name hCoV-19/Pakistan/IDRL-AKU-KHI-77163-S1/2022 host_age 56 host_anatomical_part nasopharynx host_sex male purpose_of_sampling Diagnostic testing purpose_of_sequencing baseline surveillance (random sampling) sequenced_by Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan BioSampleModel SARS-CoV-2: clinical or host-associated SRS15909324 SAMN31937301 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 764553 PRJNA764553 collected_by Clinical Lab, Aga Khan University Hospital collection_date 2022-09-05 geo_loc_name Pakistan: Karachi host Homo sapiens host_disease COVID-19 isolate 77527 isolation_source nasal swab collection_device Sterile Dacron Swab gisaid_virus_name hCoV-19/Pakistan/IDRL-AKU-KHI-77527-S2/2022 host_age 30 host_anatomical_part nasopharynx host_sex female purpose_of_sampling Diagnostic testing purpose_of_sequencing baseline surveillance (random sampling) sequenced_by Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan BioSampleModel SARS-CoV-2: clinical or host-associated SRS15909325 SAMN31937310 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 764553 PRJNA764553 collected_by Clinical Lab, Aga Khan University Hospital collection_date 2022-09-12 geo_loc_name Pakistan: Karachi host Homo sapiens host_disease COVID-19 isolate 77976 isolation_source nasal swab collection_device Sterile Dacron Swab gisaid_virus_name hCoV-19/Pakistan/IDRL-AKU-KHI-77976-S11/2022 host_age 33 host_anatomical_part nasopharynx host_sex male purpose_of_sampling Diagnostic testing purpose_of_sequencing baseline surveillance (random sampling) sequenced_by Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan BioSampleModel SARS-CoV-2: clinical or host-associated SRS15909326 SAMN31937311 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 764553 PRJNA764553 collected_by Clinical Lab, Aga Khan University Hospital collection_date 2022-09-13 geo_loc_name Pakistan: Karachi host Homo sapiens host_disease COVID-19 isolate 78002 isolation_source nasal swab collection_device Sterile Dacron Swab gisaid_virus_name hCoV-19/Pakistan/IDRL-AKU-KHI-78002-S13/2022 host_age 76 host_anatomical_part nasopharynx host_sex male purpose_of_sampling Diagnostic testing purpose_of_sequencing baseline surveillance (random sampling) sequenced_by Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan BioSampleModel SARS-CoV-2: clinical or host-associated SRS15909327 SAMN31937312 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 764553 PRJNA764553 collected_by Clinical Lab, Aga Khan University Hospital collection_date 2022-09-13 geo_loc_name Pakistan: Karachi host Homo sapiens host_disease COVID-19 isolate 78004 isolation_source nasal swab collection_device Sterile Dacron Swab gisaid_virus_name hCoV-19/Pakistan/IDRL-AKU-KHI-78004-S12/2022 host_age 85 host_anatomical_part nasopharynx host_sex male purpose_of_sampling Diagnostic testing purpose_of_sequencing baseline surveillance (random sampling) sequenced_by Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan BioSampleModel SARS-CoV-2: clinical or host-associated SRS15909328 SAMN31937313 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 764553 PRJNA764553 collected_by Clinical Lab, Aga Khan University Hospital collection_date 2022-09-13 geo_loc_name Pakistan: Karachi host Homo sapiens host_disease COVID-19 isolate 78015 isolation_source nasal swab collection_device Sterile Dacron Swab gisaid_virus_name hCoV-19/Pakistan/IDRL-AKU-KHI-78015-S14/2022 host_age 44 host_anatomical_part nasopharynx host_sex male purpose_of_sampling Diagnostic testing purpose_of_sequencing baseline surveillance (random sampling) sequenced_by Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan BioSampleModel SARS-CoV-2: clinical or host-associated SRS15909329 SAMN31937314 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 764553 PRJNA764553 collected_by Clinical Lab, Aga Khan University Hospital collection_date 2022-09-13 geo_loc_name Pakistan: Karachi host Homo sapiens host_disease COVID-19 isolate 78030 isolation_source nasal swab collection_device Sterile Dacron Swab gisaid_virus_name hCoV-19/Pakistan/IDRL-AKU-KHI-78030-S16/2022 host_age 16 host_anatomical_part nasopharynx host_sex female purpose_of_sampling Diagnostic testing purpose_of_sequencing baseline surveillance (random sampling) sequenced_by Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan BioSampleModel SARS-CoV-2: clinical or host-associated SRS15909330 SAMN31937315 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 764553 PRJNA764553 collected_by Clinical Lab, Aga Khan University Hospital collection_date 2022-09-13 geo_loc_name Pakistan: Karachi host Homo sapiens host_disease COVID-19 isolate 78043 isolation_source nasal swab collection_device Sterile Dacron Swab gisaid_virus_name hCoV-19/Pakistan/IDRL-AKU-KHI-78043-S15/2022 host_age 20 host_anatomical_part nasopharynx host_sex female purpose_of_sampling Diagnostic testing purpose_of_sequencing baseline surveillance (random sampling) sequenced_by Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan BioSampleModel SARS-CoV-2: clinical or host-associated SRS15909331 SAMN31937316 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 764553 PRJNA764553 collected_by Clinical Lab, Aga Khan University Hospital collection_date 2022-09-14 geo_loc_name Pakistan: Karachi host Homo sapiens host_disease COVID-19 isolate 78098 isolation_source nasal swab collection_device Sterile Dacron Swab gisaid_virus_name hCoV-19/Pakistan/IDRL-AKU-KHI-78098-S17/2022 host_age 23 host_anatomical_part nasopharynx host_sex female purpose_of_sampling Diagnostic testing purpose_of_sequencing baseline surveillance (random sampling) sequenced_by Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan BioSampleModel SARS-CoV-2: clinical or host-associated SRS15909332 SAMN31937317 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 764553 PRJNA764553 collected_by Clinical Lab, Aga Khan University Hospital collection_date 2022-09-14 geo_loc_name Pakistan: Karachi host Homo sapiens host_disease COVID-19 isolate 78102 isolation_source nasal swab collection_device Sterile Dacron Swab gisaid_virus_name hCoV-19/Pakistan/IDRL-AKU-KHI-78102-S18/2022 host_age 15 host_anatomical_part nasopharynx host_sex male purpose_of_sampling Diagnostic testing purpose_of_sequencing baseline surveillance (random sampling) sequenced_by Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan BioSampleModel SARS-CoV-2: clinical or host-associated SRS15909333 SAMN31937302 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 764553 PRJNA764553 collected_by Clinical Lab, Aga Khan University Hospital collection_date 2022-09-07 geo_loc_name Pakistan: Karachi host Homo sapiens host_disease COVID-19 isolate 77641 isolation_source nasal swab collection_device Sterile Dacron Swab gisaid_virus_name hCoV-19/Pakistan/IDRL-AKU-KHI-77641-S4/2022 host_age 23 host_anatomical_part nasopharynx host_sex female purpose_of_sampling Diagnostic testing purpose_of_sequencing baseline surveillance (random sampling) sequenced_by Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan BioSampleModel SARS-CoV-2: clinical or host-associated SRS15909334 SAMN31937303 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 764553 PRJNA764553 collected_by Clinical Lab, Aga Khan University Hospital collection_date 2022-09-07 geo_loc_name Pakistan: Karachi host Homo sapiens host_disease COVID-19 isolate 77647 isolation_source nasal swab collection_device Sterile Dacron Swab gisaid_virus_name hCoV-19/Pakistan/IDRL-AKU-KHI-77647-S3/2022 host_age 52 host_anatomical_part nasopharynx host_sex male purpose_of_sampling Diagnostic testing purpose_of_sequencing baseline surveillance (random sampling) sequenced_by Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan BioSampleModel SARS-CoV-2: clinical or host-associated SRS15909335 SAMN31937304 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 764553 PRJNA764553 collected_by Clinical Lab, Aga Khan University Hospital collection_date 2022-09-08 geo_loc_name Pakistan: Karachi host Homo sapiens host_disease COVID-19 isolate 77681 isolation_source nasal swab collection_device Sterile Dacron Swab gisaid_virus_name hCoV-19/Pakistan/IDRL-AKU-KHI-77681-S5/2022 host_age 57 host_anatomical_part nasopharynx host_sex female purpose_of_sampling Diagnostic testing purpose_of_sequencing baseline surveillance (random sampling) sequenced_by Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan BioSampleModel SARS-CoV-2: clinical or host-associated SRS15909336 SAMN31937305 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 764553 PRJNA764553 collected_by Clinical Lab, Aga Khan University Hospital collection_date 2022-09-11 geo_loc_name Pakistan: Karachi host Homo sapiens host_disease COVID-19 isolate 77894 isolation_source nasal swab collection_device Sterile Dacron Swab gisaid_virus_name hCoV-19/Pakistan/IDRL-AKU-KHI-77894-S8/2022 host_age 24 host_anatomical_part nasopharynx host_sex female purpose_of_sampling Diagnostic testing purpose_of_sequencing baseline surveillance (random sampling) sequenced_by Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan BioSampleModel SARS-CoV-2: clinical or host-associated SRS15909337 SAMN31937306 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 764553 PRJNA764553 collected_by Clinical Lab, Aga Khan University Hospital collection_date 2022-09-11 geo_loc_name Pakistan: Karachi host Homo sapiens host_disease COVID-19 isolate 77895 isolation_source nasal swab collection_device Sterile Dacron Swab gisaid_virus_name hCoV-19/Pakistan/IDRL-AKU-KHI-77895-S7/2022 host_age 32 host_anatomical_part nasopharynx host_sex female purpose_of_sampling Diagnostic testing purpose_of_sequencing baseline surveillance (random sampling) sequenced_by Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan BioSampleModel SARS-CoV-2: clinical or host-associated SRS15909338 SAMN31937307 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 764553 PRJNA764553 collected_by Clinical Lab, Aga Khan University Hospital collection_date 2022-09-11 geo_loc_name Pakistan: Karachi host Homo sapiens host_disease COVID-19 isolate 77907 isolation_source nasal swab collection_device Sterile Dacron Swab gisaid_virus_name hCoV-19/Pakistan/IDRL-AKU-KHI-77907-S6/2022 host_age 83 host_anatomical_part nasopharynx host_sex male purpose_of_sampling Diagnostic testing purpose_of_sequencing baseline surveillance (random sampling) sequenced_by Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan BioSampleModel SARS-CoV-2: clinical or host-associated SRS15909339 SAMN31937308 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 764553 PRJNA764553 collected_by Clinical Lab, Aga Khan University Hospital collection_date 2022-09-12 geo_loc_name Pakistan: Karachi host Homo sapiens host_disease COVID-19 isolate 77940 isolation_source nasal swab collection_device Sterile Dacron Swab gisaid_virus_name hCoV-19/Pakistan/IDRL-AKU-KHI-77940-S9/2022 host_age 23 host_anatomical_part nasopharynx host_sex male purpose_of_sampling Diagnostic testing purpose_of_sequencing baseline surveillance (random sampling) sequenced_by Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan BioSampleModel SARS-CoV-2: clinical or host-associated SRS15909340 SAMN31937309 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 764553 PRJNA764553 collected_by Clinical Lab, Aga Khan University Hospital collection_date 2022-09-12 geo_loc_name Pakistan: Karachi host Homo sapiens host_disease COVID-19 isolate 77954 isolation_source nasal swab collection_device Sterile Dacron Swab gisaid_virus_name hCoV-19/Pakistan/IDRL-AKU-KHI-77954-S10/2022 host_age 4 host_anatomical_part nasopharynx host_sex female purpose_of_sampling Diagnostic testing purpose_of_sequencing baseline surveillance (random sampling) sequenced_by Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan BioSampleModel SARS-CoV-2: clinical or host-associated