SRX18431288 Dairy 1 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913043 Dairy 1 Dairy 1 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431289 Dairy 10 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913044 Dairy 10 Dairy 10 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431290 Dairy 108 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913045 Dairy 108 Dairy 108 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431291 Dairy 70 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913046 Dairy 70 Dairy 70 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431292 Dairy 71 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913047 Dairy 71 Dairy 71 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431293 Dairy 72 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913048 Dairy 72 Dairy 72 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431294 Dairy 73 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913049 Dairy 73 Dairy 73 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431295 Dairy 74 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913050 Dairy 74 Dairy 74 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431296 Dairy 75 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913051 Dairy 75 Dairy 75 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431297 Dairy 76 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913052 Dairy 76 Dairy 76 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431298 Dairy 77 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913053 Dairy 77 Dairy 77 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431299 Dairy 78 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913054 Dairy 78 Dairy 78 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431300 Dairy 79 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913055 Dairy 79 Dairy 79 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431301 Dairy 109 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913056 Dairy 109 Dairy 109 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431302 Dairy 8 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913057 Dairy 8 Dairy 8 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431303 Dairy 80 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913058 Dairy 80 Dairy 80 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431304 Dairy 96 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913059 Dairy 96 Dairy 96 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431305 Dairy 97 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913060 Dairy 97 Dairy 97 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431306 Dairy 98 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913061 Dairy 98 Dairy 98 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431307 Dairy 110 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913062 Dairy 110 Dairy 110 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431308 Dairy 99 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913063 Dairy 99 Dairy 99 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431309 Mock 1 SRP410653 bp0 The extracted DNA from know 10 Fungal strains were used to construct the ITS (Internal Transcribed Spacer) libraryfollowing the protocol from the Earth Microbiome Project. The amplified DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITSamplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913064 Mock 1 Mock 1 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431310 Mock 2 SRP410653 bp0 The extracted DNA from know 10 Fungal strains were used to construct the ITS (Internal Transcribed Spacer) libraryfollowing the protocol from the Earth Microbiome Project. The amplified DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITSamplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913065 Mock 2 Mock 2 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431311 Water 1 SRP410653 bp0 PCR grade water was used to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol from the Earth Microbiome Project. The amplified DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913066 Water 1 Water 1 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431312 Water 2 SRP410653 bp0 PCR grade water was used to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol from the Earth Microbiome Project. The amplified DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913067 Water 2 Water 2 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431313 Dairy 111 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913068 Dairy 111 Dairy 111 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431314 Dairy 112 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913069 Dairy 112 Dairy 112 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431315 Dairy 113 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913070 Dairy 113 Dairy 113 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431316 Dairy 114 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913071 Dairy 114 Dairy 114 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431317 Dairy 115 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913072 Dairy 115 Dairy 115 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431318 Dairy 116 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913073 Dairy 116 Dairy 116 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431319 Dairy 100 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913074 Dairy 100 Dairy 100 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431320 Dairy 117 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913075 Dairy 117 Dairy 117 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431321 Dairy 118 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913076 Dairy 118 Dairy 118 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431322 Dairy 66 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913077 Dairy 66 Dairy 66 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431323 Dairy 67 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913078 Dairy 67 Dairy 67 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431324 Dairy 68 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913079 Dairy 68 Dairy 68 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431325 Dairy 69 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913080 Dairy 69 Dairy 69 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431326 Dairy 7 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913081 Dairy 7 Dairy 7 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431327 Dairy 81 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913082 Dairy 81 Dairy 81 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431328 Dairy 82 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913083 Dairy 82 Dairy 82 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431329 Dairy 83 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913084 Dairy 83 Dairy 83 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431330 Dairy 84 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913085 Dairy 84 Dairy 84 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431331 Dairy 85 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913086 Dairy 85 Dairy 85 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431332 Dairy 86 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913087 Dairy 86 Dairy 86 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431333 Dairy 87 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913088 Dairy 87 Dairy 87 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431334 Dairy 88 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913089 Dairy 88 Dairy 88 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431335 Dairy 11 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913090 Dairy 11 Dairy 11 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431336 Dairy 89 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913091 Dairy 89 Dairy 89 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431337 Dairy 9 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913092 Dairy 9 Dairy 9 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431338 Dairy 90 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913093 Dairy 90 Dairy 90 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431339 Dairy 91 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913094 Dairy 91 Dairy 91 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431340 Dairy 93 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913095 Dairy 93 Dairy 93 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431341 Dairy 94 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913096 Dairy 94 Dairy 94 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431342 Dairy 95 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913098 Dairy 95 Dairy 95 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431343 Dairy 133 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913097 Dairy 133 Dairy 133 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431344 Dairy 14 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913099 Dairy 14 Dairy 14 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431345 Dairy 15 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913100 Dairy 15 Dairy 15 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431346 Dairy 102 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913101 Dairy 102 Dairy 102 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431347 Dairy 16 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913102 Dairy 16 Dairy 16 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431348 Dairy 17 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913103 Dairy 17 Dairy 17 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431349 Dairy 18 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913104 Dairy 18 Dairy 18 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431350 Dairy 19 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913105 Dairy 19 Dairy 19 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431351 Dairy 2 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913106 Dairy 2 Dairy 2 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431352 Dairy 20 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913107 Dairy 20 Dairy 20 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431353 Dairy 21 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913108 Dairy 21 Dairy 21 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431354 Dairy 22 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913109 Dairy 22 Dairy 22 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431355 Dairy 23 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913110 Dairy 23 Dairy 23 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431356 Dairy 24 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913111 Dairy 24 Dairy 24 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431357 Dairy 103 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913113 Dairy 103 Dairy 103 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431358 Dairy 25 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913112 Dairy 25 Dairy 25 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431359 Dairy 52 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913114 Dairy 52 Dairy 52 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431360 Dairy 53 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913115 Dairy 53 Dairy 53 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431361 Dairy 54 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913116 Dairy 54 Dairy 54 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431362 Dairy 55 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913117 Dairy 55 Dairy 55 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431363 Dairy 56 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913118 Dairy 56 Dairy 56 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431364 Dairy 57 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913119 Dairy 57 Dairy 57 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431365 Dairy 58 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913120 Dairy 58 Dairy 58 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431366 Dairy 59 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913121 Dairy 59 Dairy 59 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431367 Dairy 6 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913122 Dairy 6 Dairy 6 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431368 Dairy 60 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913123 Dairy 60 Dairy 60 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431369 Dairy 107 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913124 Dairy 107 Dairy 107 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431370 Dairy 61 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913125 Dairy 61 Dairy 61 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431371 Dairy 62 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913126 Dairy 62 Dairy 62 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431372 Dairy 63 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913127 Dairy 63 Dairy 63 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431373 Dairy 64 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913128 Dairy 64 Dairy 64 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431374 Dairy 65 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913129 Dairy 65 Dairy 65 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431375 Dairy 119 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913130 Dairy 119 Dairy 119 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431376 Dairy 12 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913131 Dairy 12 Dairy 12 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431377 Dairy 120 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913132 Dairy 120 Dairy 120 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431378 Dairy 121 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913133 Dairy 121 Dairy 121 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431379 Dairy 122 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913134 Dairy 122 Dairy 122 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431380 Dairy 124 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913135 Dairy 124 Dairy 124 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431381 Dairy 125 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913136 Dairy 125 Dairy 125 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431382 Dairy 126 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913137 Dairy 126 Dairy 126 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431383 Dairy 101 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913138 Dairy 101 Dairy 101 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431384 Dairy 127 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913139 Dairy 127 Dairy 127 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431385 Dairy 128 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913140 Dairy 128 Dairy 128 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431386 Dairy 129 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913141 Dairy 129 Dairy 129 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431387 Dairy 13 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913142 Dairy 13 Dairy 13 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431388 Dairy 130 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913143 Dairy 130 Dairy 130 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431389 Dairy 131 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913144 Dairy 131 Dairy 131 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431390 Dairy 132 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913145 Dairy 132 Dairy 132 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431391 Dairy 26 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913146 Dairy 26 Dairy 26 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431392 Dairy 27 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913147 Dairy 27 Dairy 27 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431393 Dairy 28 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913148 Dairy 28 Dairy 28 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431394 Dairy 29 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913149 Dairy 29 Dairy 29 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431395 Dairy 3 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913150 Dairy 3 Dairy 3 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431396 Dairy 30 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913151 Dairy 30 Dairy 30 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431397 Dairy 31 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913152 Dairy 31 Dairy 31 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431398 Dairy 32 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913153 Dairy 32 Dairy 32 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431399 Dairy 33 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913154 Dairy 33 Dairy 33 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431400 Dairy 104 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913155 Dairy 104 Dairy 104 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431401 Dairy 34 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913156 Dairy 34 Dairy 34 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431402 Dairy 35 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913157 Dairy 35 Dairy 35 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431403 Dairy 36 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913158 Dairy 36 Dairy 36 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431404 Dairy 37 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913159 Dairy 37 Dairy 37 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431405 Dairy 38 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913160 Dairy 38 Dairy 38 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431406 Dairy 39 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913161 Dairy 39 Dairy 39 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431407 Dairy 4 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913162 Dairy 4 Dairy 4 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431408 Dairy 40 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913163 Dairy 40 Dairy 40 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431409 Dairy 41 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913164 Dairy 41 Dairy 41 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431410 Dairy 42 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913165 Dairy 42 Dairy 42 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431411 Dairy 105 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913166 Dairy 105 Dairy 105 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431412 Dairy 43 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913167 Dairy 43 Dairy 43 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431413 Dairy 44 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913168 Dairy 44 Dairy 44 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431414 Dairy 45 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913169 Dairy 45 Dairy 45 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431415 Dairy 46 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913170 Dairy 46 Dairy 46 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431416 Dairy 47 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913171 Dairy 47 Dairy 47 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431417 Dairy 48 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913172 Dairy 48 Dairy 48 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431418 Dairy 49 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913173 Dairy 49 Dairy 49 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431419 Dairy 5 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913175 Dairy 5 Dairy 5 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431420 Dairy 50 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913174 Dairy 50 Dairy 50 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431421 Dairy 51 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913176 Dairy 51 Dairy 51 AMPLICON METAGENOMIC PCR Illumina MiniSeq SRX18431422 Dairy 106 SRP410653 bp0 Nasal swabs were collected from apparently healthy (n=73) and BRD-affected (n=56) pen-mates Holstein steers. Nasal swabs were collected from July-December 2020 in a feedlot located at Indiana, USA. DNA was then extracted from the nasal swabs to construct the fungal ITS (Internal Transcribed Spacer) library following the protocol fromthe Earth Microbiome Project. The amplified fungal DNA was normalized using the SequalPrep Normalization Plate (Invitrogen) and pooled to form a single library. The ITS amplicons were sequenced using Ilumina MiSeq (2x250, paired-end). SRS15913177 Dairy 106 Dairy 106 AMPLICON METAGENOMIC PCR Illumina MiniSeq