<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT accession="SRX18464774" alias="GSM6777971_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX18464774</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM6777971_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM6777971: RNA-Seq CD8 0h Replicate 1; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP376840">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP376840</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA841972</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS15941947">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS15941947</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM6777971</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM6777971</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Naive CD44- CD62L+ CD8+ P14 cells or CD44- CD62L+ CD4+ Smarta cells were flowcytometrically sorted from LCMV-TCRtg mice and differentiated in the presence of irradiated splenocytes from TCRbd-/- mice and cognate LCMV GP33-41 (P14) or GP64-80 peptide (Smarta) peptide (1µg/ml). T cells were cultivated in RPMI1640 + GlutaMax I (Thermo Scientific) supplemented with fetal calf serum (FCS) (10%), penicillin (100 U/ml), streptomycin (100 μg/ml), gentamycin (10 μg/ml) and b-mercaptoethanol (50 ng/ml). For CTL and Th1 differentiation, IL-12 (5 ng/ml), IL-2 (5 ng/ml), and anti-IL-4 antibody (11B11, 10 μg/ml) were added. For Th2 differentiation, IL-4 (5 ng/ml), IL-2 (5 ng/ml), anti-IL-12 (C18.2, 10 μg/ml) and anti-IFN-g antibody (XMG1.2, 10 μg/ml) were added. T cells were harvested at day 5 of culture using Histopaque density centrifugation and cultivated for additional 5 days in identical culture conditions.  At day 10 of culture, T cells were harvested and rested for 3 days in the presence of IL-2 (5 ng/ml) and IL-7 (5 ng/ml), without irradiated splenocytes or cognate peptide. At day 13, IL-12 (5 ng/ml) was added to CTLs and Th1 cells to induce ST2 expression. At day 14 of culture, dead cells were removed using Histopaque density centrifugation. Subsequently, 2,5x105 T cells were plated in 96 flat bottom well plates and stimulated with IL-33 (10ng/ul) or left untreated. See Sorting strategy RNA was purified using the Nucleospin RNA XS Micro kit (Macherey &amp; Nagel) according to manufacturer's instructions, without addition of carrier RNA. Smart-Seq v4 mRNA Ultra Low Input RNA Kit (Clontech)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX18464775" alias="GSM6777972_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX18464775</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM6777972_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM6777972: RNA-Seq CD8 0h Replicate 2; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP376840">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP376840</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA841972</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS15941948">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS15941948</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM6777972</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM6777972</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Naive CD44- CD62L+ CD8+ P14 cells or CD44- CD62L+ CD4+ Smarta cells were flowcytometrically sorted from LCMV-TCRtg mice and differentiated in the presence of irradiated splenocytes from TCRbd-/- mice and cognate LCMV GP33-41 (P14) or GP64-80 peptide (Smarta) peptide (1µg/ml). T cells were cultivated in RPMI1640 + GlutaMax I (Thermo Scientific) supplemented with fetal calf serum (FCS) (10%), penicillin (100 U/ml), streptomycin (100 μg/ml), gentamycin (10 μg/ml) and b-mercaptoethanol (50 ng/ml). For CTL and Th1 differentiation, IL-12 (5 ng/ml), IL-2 (5 ng/ml), and anti-IL-4 antibody (11B11, 10 μg/ml) were added. For Th2 differentiation, IL-4 (5 ng/ml), IL-2 (5 ng/ml), anti-IL-12 (C18.2, 10 μg/ml) and anti-IFN-g antibody (XMG1.2, 10 μg/ml) were added. T cells were harvested at day 5 of culture using Histopaque density centrifugation and cultivated for additional 5 days in identical culture conditions.  At day 10 of culture, T cells were harvested and rested for 3 days in the presence of IL-2 (5 ng/ml) and IL-7 (5 ng/ml), without irradiated splenocytes or cognate peptide. At day 13, IL-12 (5 ng/ml) was added to CTLs and Th1 cells to induce ST2 expression. At day 14 of culture, dead cells were removed using Histopaque density centrifugation. Subsequently, 2,5x105 T cells were plated in 96 flat bottom well plates and stimulated with IL-33 (10ng/ul) or left untreated. See Sorting strategy RNA was purified using the Nucleospin RNA XS Micro kit (Macherey &amp; Nagel) according to manufacturer's instructions, without addition of carrier RNA. Smart-Seq v4 mRNA Ultra Low Input RNA Kit (Clontech)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX18464776" alias="GSM6777973_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX18464776</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM6777973_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM6777973: RNA-Seq CD8 0h Replicate 3; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP376840">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP376840</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA841972</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS15941949">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS15941949</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM6777973</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM6777973</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Naive CD44- CD62L+ CD8+ P14 cells or CD44- CD62L+ CD4+ Smarta cells were flowcytometrically sorted from LCMV-TCRtg mice and differentiated in the presence of irradiated splenocytes from TCRbd-/- mice and cognate LCMV GP33-41 (P14) or GP64-80 peptide (Smarta) peptide (1µg/ml). T cells were cultivated in RPMI1640 + GlutaMax I (Thermo Scientific) supplemented with fetal calf serum (FCS) (10%), penicillin (100 U/ml), streptomycin (100 μg/ml), gentamycin (10 μg/ml) and b-mercaptoethanol (50 ng/ml). For CTL and Th1 differentiation, IL-12 (5 ng/ml), IL-2 (5 ng/ml), and anti-IL-4 antibody (11B11, 10 μg/ml) were added. For Th2 differentiation, IL-4 (5 ng/ml), IL-2 (5 ng/ml), anti-IL-12 (C18.2, 10 μg/ml) and anti-IFN-g antibody (XMG1.2, 10 μg/ml) were added. T cells were harvested at day 5 of culture using Histopaque density centrifugation and cultivated for additional 5 days in identical culture conditions.  At day 10 of culture, T cells were harvested and rested for 3 days in the presence of IL-2 (5 ng/ml) and IL-7 (5 ng/ml), without irradiated splenocytes or cognate peptide. At day 13, IL-12 (5 ng/ml) was added to CTLs and Th1 cells to induce ST2 expression. At day 14 of culture, dead cells were removed using Histopaque density centrifugation. Subsequently, 2,5x105 T cells were plated in 96 flat bottom well plates and stimulated with IL-33 (10ng/ul) or left untreated. See Sorting strategy RNA was purified using the Nucleospin RNA XS Micro kit (Macherey &amp; Nagel) according to manufacturer's instructions, without addition of carrier RNA. Smart-Seq v4 mRNA Ultra Low Input RNA Kit (Clontech)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX18464777" alias="GSM6777974_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX18464777</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM6777974_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM6777974: RNA-Seq Th1 0h Replicate 1; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP376840">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP376840</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA841972</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS15941950">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS15941950</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM6777974</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM6777974</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Naive CD44- CD62L+ CD8+ P14 cells or CD44- CD62L+ CD4+ Smarta cells were flowcytometrically sorted from LCMV-TCRtg mice and differentiated in the presence of irradiated splenocytes from TCRbd-/- mice and cognate LCMV GP33-41 (P14) or GP64-80 peptide (Smarta) peptide (1µg/ml). T cells were cultivated in RPMI1640 + GlutaMax I (Thermo Scientific) supplemented with fetal calf serum (FCS) (10%), penicillin (100 U/ml), streptomycin (100 μg/ml), gentamycin (10 μg/ml) and b-mercaptoethanol (50 ng/ml). For CTL and Th1 differentiation, IL-12 (5 ng/ml), IL-2 (5 ng/ml), and anti-IL-4 antibody (11B11, 10 μg/ml) were added. For Th2 differentiation, IL-4 (5 ng/ml), IL-2 (5 ng/ml), anti-IL-12 (C18.2, 10 μg/ml) and anti-IFN-g antibody (XMG1.2, 10 μg/ml) were added. T cells were harvested at day 5 of culture using Histopaque density centrifugation and cultivated for additional 5 days in identical culture conditions.  At day 10 of culture, T cells were harvested and rested for 3 days in the presence of IL-2 (5 ng/ml) and IL-7 (5 ng/ml), without irradiated splenocytes or cognate peptide. At day 13, IL-12 (5 ng/ml) was added to CTLs and Th1 cells to induce ST2 expression. At day 14 of culture, dead cells were removed using Histopaque density centrifugation. Subsequently, 2,5x105 T cells were plated in 96 flat bottom well plates and stimulated with IL-33 (10ng/ul) or left untreated. See Sorting strategy RNA was purified using the Nucleospin RNA XS Micro kit (Macherey &amp; Nagel) according to manufacturer's instructions, without addition of carrier RNA. Smart-Seq v4 mRNA Ultra Low Input RNA Kit (Clontech)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX18464778" alias="GSM6777975_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX18464778</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM6777975_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM6777975: RNA-Seq Th1 0h Replicate 2; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP376840">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP376840</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA841972</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS15941951">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS15941951</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM6777975</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM6777975</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Naive CD44- CD62L+ CD8+ P14 cells or CD44- CD62L+ CD4+ Smarta cells were flowcytometrically sorted from LCMV-TCRtg mice and differentiated in the presence of irradiated splenocytes from TCRbd-/- mice and cognate LCMV GP33-41 (P14) or GP64-80 peptide (Smarta) peptide (1µg/ml). T cells were cultivated in RPMI1640 + GlutaMax I (Thermo Scientific) supplemented with fetal calf serum (FCS) (10%), penicillin (100 U/ml), streptomycin (100 μg/ml), gentamycin (10 μg/ml) and b-mercaptoethanol (50 ng/ml). For CTL and Th1 differentiation, IL-12 (5 ng/ml), IL-2 (5 ng/ml), and anti-IL-4 antibody (11B11, 10 μg/ml) were added. For Th2 differentiation, IL-4 (5 ng/ml), IL-2 (5 ng/ml), anti-IL-12 (C18.2, 10 μg/ml) and anti-IFN-g antibody (XMG1.2, 10 μg/ml) were added. T cells were harvested at day 5 of culture using Histopaque density centrifugation and cultivated for additional 5 days in identical culture conditions.  At day 10 of culture, T cells were harvested and rested for 3 days in the presence of IL-2 (5 ng/ml) and IL-7 (5 ng/ml), without irradiated splenocytes or cognate peptide. At day 13, IL-12 (5 ng/ml) was added to CTLs and Th1 cells to induce ST2 expression. At day 14 of culture, dead cells were removed using Histopaque density centrifugation. Subsequently, 2,5x105 T cells were plated in 96 flat bottom well plates and stimulated with IL-33 (10ng/ul) or left untreated. See Sorting strategy RNA was purified using the Nucleospin RNA XS Micro kit (Macherey &amp; Nagel) according to manufacturer's instructions, without addition of carrier RNA. Smart-Seq v4 mRNA Ultra Low Input RNA Kit (Clontech)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX18464779" alias="GSM6777976_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX18464779</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM6777976_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM6777976: RNA-Seq Th1 0h Replicate 3; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP376840">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP376840</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA841972</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS15941952">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS15941952</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM6777976</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM6777976</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Naive CD44- CD62L+ CD8+ P14 cells or CD44- CD62L+ CD4+ Smarta cells were flowcytometrically sorted from LCMV-TCRtg mice and differentiated in the presence of irradiated splenocytes from TCRbd-/- mice and cognate LCMV GP33-41 (P14) or GP64-80 peptide (Smarta) peptide (1µg/ml). T cells were cultivated in RPMI1640 + GlutaMax I (Thermo Scientific) supplemented with fetal calf serum (FCS) (10%), penicillin (100 U/ml), streptomycin (100 μg/ml), gentamycin (10 μg/ml) and b-mercaptoethanol (50 ng/ml). For CTL and Th1 differentiation, IL-12 (5 ng/ml), IL-2 (5 ng/ml), and anti-IL-4 antibody (11B11, 10 μg/ml) were added. For Th2 differentiation, IL-4 (5 ng/ml), IL-2 (5 ng/ml), anti-IL-12 (C18.2, 10 μg/ml) and anti-IFN-g antibody (XMG1.2, 10 μg/ml) were added. T cells were harvested at day 5 of culture using Histopaque density centrifugation and cultivated for additional 5 days in identical culture conditions.  At day 10 of culture, T cells were harvested and rested for 3 days in the presence of IL-2 (5 ng/ml) and IL-7 (5 ng/ml), without irradiated splenocytes or cognate peptide. At day 13, IL-12 (5 ng/ml) was added to CTLs and Th1 cells to induce ST2 expression. At day 14 of culture, dead cells were removed using Histopaque density centrifugation. Subsequently, 2,5x105 T cells were plated in 96 flat bottom well plates and stimulated with IL-33 (10ng/ul) or left untreated. See Sorting strategy RNA was purified using the Nucleospin RNA XS Micro kit (Macherey &amp; Nagel) according to manufacturer's instructions, without addition of carrier RNA. Smart-Seq v4 mRNA Ultra Low Input RNA Kit (Clontech)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX18464780" alias="GSM6777977_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX18464780</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM6777977_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM6777977: RNA-Seq Th2 0h Replicate 1; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP376840">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP376840</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA841972</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS15941953">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS15941953</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM6777977</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM6777977</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Naive CD44- CD62L+ CD8+ P14 cells or CD44- CD62L+ CD4+ Smarta cells were flowcytometrically sorted from LCMV-TCRtg mice and differentiated in the presence of irradiated splenocytes from TCRbd-/- mice and cognate LCMV GP33-41 (P14) or GP64-80 peptide (Smarta) peptide (1µg/ml). T cells were cultivated in RPMI1640 + GlutaMax I (Thermo Scientific) supplemented with fetal calf serum (FCS) (10%), penicillin (100 U/ml), streptomycin (100 μg/ml), gentamycin (10 μg/ml) and b-mercaptoethanol (50 ng/ml). For CTL and Th1 differentiation, IL-12 (5 ng/ml), IL-2 (5 ng/ml), and anti-IL-4 antibody (11B11, 10 μg/ml) were added. For Th2 differentiation, IL-4 (5 ng/ml), IL-2 (5 ng/ml), anti-IL-12 (C18.2, 10 μg/ml) and anti-IFN-g antibody (XMG1.2, 10 μg/ml) were added. T cells were harvested at day 5 of culture using Histopaque density centrifugation and cultivated for additional 5 days in identical culture conditions.  At day 10 of culture, T cells were harvested and rested for 3 days in the presence of IL-2 (5 ng/ml) and IL-7 (5 ng/ml), without irradiated splenocytes or cognate peptide. At day 13, IL-12 (5 ng/ml) was added to CTLs and Th1 cells to induce ST2 expression. At day 14 of culture, dead cells were removed using Histopaque density centrifugation. Subsequently, 2,5x105 T cells were plated in 96 flat bottom well plates and stimulated with IL-33 (10ng/ul) or left untreated. See Sorting strategy RNA was purified using the Nucleospin RNA XS Micro kit (Macherey &amp; Nagel) according to manufacturer's instructions, without addition of carrier RNA. Smart-Seq v4 mRNA Ultra Low Input RNA Kit (Clontech)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX18464781" alias="GSM6777978_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX18464781</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM6777978_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM6777978: RNA-Seq Th2 0h Replicate 2; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP376840">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP376840</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA841972</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS15941954">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS15941954</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM6777978</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM6777978</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Naive CD44- CD62L+ CD8+ P14 cells or CD44- CD62L+ CD4+ Smarta cells were flowcytometrically sorted from LCMV-TCRtg mice and differentiated in the presence of irradiated splenocytes from TCRbd-/- mice and cognate LCMV GP33-41 (P14) or GP64-80 peptide (Smarta) peptide (1µg/ml). T cells were cultivated in RPMI1640 + GlutaMax I (Thermo Scientific) supplemented with fetal calf serum (FCS) (10%), penicillin (100 U/ml), streptomycin (100 μg/ml), gentamycin (10 μg/ml) and b-mercaptoethanol (50 ng/ml). For CTL and Th1 differentiation, IL-12 (5 ng/ml), IL-2 (5 ng/ml), and anti-IL-4 antibody (11B11, 10 μg/ml) were added. For Th2 differentiation, IL-4 (5 ng/ml), IL-2 (5 ng/ml), anti-IL-12 (C18.2, 10 μg/ml) and anti-IFN-g antibody (XMG1.2, 10 μg/ml) were added. T cells were harvested at day 5 of culture using Histopaque density centrifugation and cultivated for additional 5 days in identical culture conditions.  At day 10 of culture, T cells were harvested and rested for 3 days in the presence of IL-2 (5 ng/ml) and IL-7 (5 ng/ml), without irradiated splenocytes or cognate peptide. At day 13, IL-12 (5 ng/ml) was added to CTLs and Th1 cells to induce ST2 expression. At day 14 of culture, dead cells were removed using Histopaque density centrifugation. Subsequently, 2,5x105 T cells were plated in 96 flat bottom well plates and stimulated with IL-33 (10ng/ul) or left untreated. See Sorting strategy RNA was purified using the Nucleospin RNA XS Micro kit (Macherey &amp; Nagel) according to manufacturer's instructions, without addition of carrier RNA. Smart-Seq v4 mRNA Ultra Low Input RNA Kit (Clontech)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX18464782" alias="GSM6777979_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX18464782</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM6777979_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM6777979: RNA-Seq Th2 0h Replicate 3; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP376840">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP376840</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA841972</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS15941955">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS15941955</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM6777979</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM6777979</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Naive CD44- CD62L+ CD8+ P14 cells or CD44- CD62L+ CD4+ Smarta cells were flowcytometrically sorted from LCMV-TCRtg mice and differentiated in the presence of irradiated splenocytes from TCRbd-/- mice and cognate LCMV GP33-41 (P14) or GP64-80 peptide (Smarta) peptide (1µg/ml). T cells were cultivated in RPMI1640 + GlutaMax I (Thermo Scientific) supplemented with fetal calf serum (FCS) (10%), penicillin (100 U/ml), streptomycin (100 μg/ml), gentamycin (10 μg/ml) and b-mercaptoethanol (50 ng/ml). For CTL and Th1 differentiation, IL-12 (5 ng/ml), IL-2 (5 ng/ml), and anti-IL-4 antibody (11B11, 10 μg/ml) were added. For Th2 differentiation, IL-4 (5 ng/ml), IL-2 (5 ng/ml), anti-IL-12 (C18.2, 10 μg/ml) and anti-IFN-g antibody (XMG1.2, 10 μg/ml) were added. T cells were harvested at day 5 of culture using Histopaque density centrifugation and cultivated for additional 5 days in identical culture conditions.  At day 10 of culture, T cells were harvested and rested for 3 days in the presence of IL-2 (5 ng/ml) and IL-7 (5 ng/ml), without irradiated splenocytes or cognate peptide. At day 13, IL-12 (5 ng/ml) was added to CTLs and Th1 cells to induce ST2 expression. At day 14 of culture, dead cells were removed using Histopaque density centrifugation. Subsequently, 2,5x105 T cells were plated in 96 flat bottom well plates and stimulated with IL-33 (10ng/ul) or left untreated. See Sorting strategy RNA was purified using the Nucleospin RNA XS Micro kit (Macherey &amp; Nagel) according to manufacturer's instructions, without addition of carrier RNA. Smart-Seq v4 mRNA Ultra Low Input RNA Kit (Clontech)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
