GSM6806863: Eschierichia coli K-12 MG1655, treated with ceftazidime, replicate 1; Escherichia coli; RNA-Seq

SRX18541513 GSM6806863_r1 GSM6806863: Eschierichia coli K-12 MG1655, treated with ceftazidime, replicate 1; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007763 GSM6806863 GSM6806863 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541514 GSM6806864_r1 GSM6806864: Eschierichia coli K-12 MG1655, treated with ceftazidime, replicate 2; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007764 GSM6806864 GSM6806864 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541515 GSM6806865_r1 GSM6806865: Eschierichia coli K-12 MG1655, treated with ceftazidime, replicate 3; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007765 GSM6806865 GSM6806865 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541516 GSM6806866_r1 GSM6806866: Eschierichia coli K-12 MG1655, treated with chloramphenicol, replicate 1; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007766 GSM6806866 GSM6806866 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541517 GSM6806867_r1 GSM6806867: Eschierichia coli K-12 MG1655, treated with chloramphenicol, replicate 2; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007767 GSM6806867 GSM6806867 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541518 GSM6806868_r1 GSM6806868: Eschierichia coli K-12 MG1655, treated with chloramphenicol, replicate 3; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007768 GSM6806868 GSM6806868 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541519 GSM6806869_r1 GSM6806869: Eschierichia coli K-12 MG1655, treated with ciprofloxacin, replicate 1; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007769 GSM6806869 GSM6806869 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541520 GSM6806870_r1 GSM6806870: Eschierichia coli K-12 MG1655, treated with ciprofloxacin, replicate 2; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007770 GSM6806870 GSM6806870 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541521 GSM6806871_r1 GSM6806871: Eschierichia coli K-12 MG1655, treated with ciprofloxacin, replicate 3; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007771 GSM6806871 GSM6806871 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541522 GSM6806872_r1 GSM6806872: Eschierichia coli K-12 MG1655, treated with erythromycin, replicate 1; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007772 GSM6806872 GSM6806872 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541523 GSM6806873_r1 GSM6806873: Eschierichia coli K-12 MG1655, treated with erythromycin, replicate 2; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007773 GSM6806873 GSM6806873 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541524 GSM6806874_r1 GSM6806874: Eschierichia coli K-12 MG1655, treated with erythromycin, replicate 3; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007774 GSM6806874 GSM6806874 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541525 GSM6806875_r1 GSM6806875: Eschierichia coli K-12 MG1655, treated with imipenem, replicate 1; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007775 GSM6806875 GSM6806875 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541526 GSM6806876_r1 GSM6806876: Eschierichia coli K-12 MG1655, treated with imipenem, replicate 2; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007776 GSM6806876 GSM6806876 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541527 GSM6806877_r1 GSM6806877: Eschierichia coli K-12 MG1655, treated with imipenem, replicate 3; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007777 GSM6806877 GSM6806877 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541528 GSM6806878_r1 GSM6806878: Eschierichia coli K-12 MG1655, treated with kanamycin, replicate 1; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007778 GSM6806878 GSM6806878 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541529 GSM6806879_r1 GSM6806879: Eschierichia coli K-12 MG1655, treated with kanamycin, replicate 2; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007780 GSM6806879 GSM6806879 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541530 GSM6806880_r1 GSM6806880: Eschierichia coli K-12 MG1655, treated with kanamycin, replicate 3; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007779 GSM6806880 GSM6806880 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541531 GSM6806881_r1 GSM6806881: Eschierichia coli K-12 MG1655, treated with mitomycin C, replicate 1; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007781 GSM6806881 GSM6806881 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541532 GSM6806882_r1 GSM6806882: Eschierichia coli K-12 MG1655, treated with mitomycin C, replicate 2; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007782 GSM6806882 GSM6806882 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541533 GSM6806883_r1 GSM6806883: Eschierichia coli K-12 MG1655, treated with mitomycin C, replicate 3; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007784 GSM6806883 GSM6806883 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541534 GSM6806884_r1 GSM6806884: Eschierichia coli K-12 MG1655, treated with polymyxin E, replicate 1; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007783 GSM6806884 GSM6806884 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541535 GSM6806885_r1 GSM6806885: Eschierichia coli K-12 MG1655, treated with polymyxin E, replicate 2; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007785 GSM6806885 GSM6806885 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541536 GSM6806886_r1 GSM6806886: Eschierichia coli K-12 MG1655, treated with polymyxin E, replicate 3; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007786 GSM6806886 GSM6806886 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541537 GSM6806887_r1 GSM6806887: Eschierichia coli K-12 MG1655, treated with tetracycline, replicate 1; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007787 GSM6806887 GSM6806887 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541538 GSM6806888_r1 GSM6806888: Eschierichia coli K-12 MG1655, treated with tetracycline, replicate 2; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007788 GSM6806888 GSM6806888 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541539 GSM6806889_r1 GSM6806889: Eschierichia coli K-12 MG1655, treated with tetracycline, replicate 3; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007789 GSM6806889 GSM6806889 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541540 GSM6806890_r1 GSM6806890: Eschierichia coli K-12 MG1655, water control, replicate 1; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007790 GSM6806890 GSM6806890 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541541 GSM6806891_r1 GSM6806891: Eschierichia coli K-12 MG1655, water control, replicate 2; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007791 GSM6806891 GSM6806891 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541542 GSM6806892_r1 GSM6806892: Eschierichia coli K-12 MG1655,water control, replicate 3; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007792 GSM6806892 GSM6806892 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541543 GSM6806893_r1 GSM6806893: Eschierichia coli K-12 MG1655, ethanol control, replicate 1; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007793 GSM6806893 GSM6806893 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541544 GSM6806894_r1 GSM6806894: Eschierichia coli K-12 MG1655, ethanol control, replicate 2; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007795 GSM6806894 GSM6806894 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500 SRX18541545 GSM6806895_r1 GSM6806895: Eschierichia coli K-12 MG1655, ethanol control, replicate 3; Escherichia coli; RNA-Seq SRP412281 PRJNA910221 SRS16007794 GSM6806895 GSM6806895 RNA-Seq TRANSCRIPTOMIC cDNA RNA was extracted using the Bacterial RNA Kit (Omega Bio-Tek, USA) according to the manufacturer's instructions. Sequencing libraries were generated using NEBNext® Ultra™ Directional RNA Library Prep Kit for Illumina® (NEB, USA) following manufacturer's recommendations and index codes were added to attribute sequences to each sample Illumina HiSeq 2500