<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT accession="SRX19845258" alias="Sv_leaf+flower_ccs">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX19845258</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB13021680">Sv_leaf+flower_ccs</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sv_leaf+flower_ccs</TITLE>
    <STUDY_REF accession="SRP430500">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP430500</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA951399</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Full-length transcript sequencing followed the Isoseq Express Template Preparation protocol from Pacific Biosciences (Menlo Park, CA). Leaf or flower RNA samples were prepared by pooling equal amount of 4 biological replicates of both control and MeJA-treated groups. Barcoded double-stranded cDNA libraries were generated using the NEBNext Single Cell/Low Input cDNA Synthesis &amp; Amplification Module, the NEBNext High-Fidelity 2X PCR Master Mix (New England Biolabs, Ipswich, MA) and the Iso-Seq Express Oligo Kit (Pacific Biosciences). SMRTbell sequencing adapters were added to the cDNAs with the SMRTbell Express Template Prep Kit 2.0 (Pacific Biosciences). Library strategy is using a mixture of oligo(dT) and random primers is used to generate full-length cDNA from the total RNA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS17204350">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS17204350</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN34041709</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Sv_leaf+flower_ccs</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <PACBIO_SMRT>
        <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL>
      </PACBIO_SMRT>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
