K057837_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa

SRS19338608 SAMN38040117 K057837_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057837_COVID474 strain SARS-CoV-2 isolate K057837_COVID474 collected_by NHLS collection_date 2023-08-21 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338609 SAMN38040138 K056861_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K056861_COVID474 strain SARS-CoV-2 isolate K056861_COVID474 collected_by PathCare collection_date missing geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338610 SAMN38040126 K057847_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057847_COVID474 strain SARS-CoV-2 isolate K057847_COVID474 collected_by PathCare collection_date 2023-08-14 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338611 SAMN38040122 K057846_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057846_COVID474 strain SARS-CoV-2 isolate K057846_COVID474 collected_by PathCare collection_date 2023-08-18 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338612 SAMN38040136 K057850_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057850_COVID474 strain SARS-CoV-2 isolate K057850_COVID474 collected_by PathCare collection_date 2023-08-21 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338613 SAMN38040130 K057848_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057848_COVID474 strain SARS-CoV-2 isolate K057848_COVID474 collected_by PathCare collection_date 2023-08-17 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338614 SAMN38040133 K057849_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057849_COVID474 strain SARS-CoV-2 isolate K057849_COVID474 collected_by PathCare collection_date 2023-08-17 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338615 SAMN38040143 K057852_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057852_COVID474 strain SARS-CoV-2 isolate K057852_COVID474 collected_by PathCare collection_date 2023-08-21 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338616 SAMN38040140 K057851_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057851_COVID474 strain SARS-CoV-2 isolate K057851_COVID474 collected_by PathCare collection_date 2023-08-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338617 SAMN38040123 K057854_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057854_COVID474 strain SARS-CoV-2 isolate K057854_COVID474 collected_by PathCare collection_date 2023-08-11 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338618 SAMN38040131 K057856_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057856_COVID474 strain SARS-CoV-2 isolate K057856_COVID474 collected_by PathCare collection_date 2023-08-16 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338619 SAMN38040127 K057855_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057855_COVID474 strain SARS-CoV-2 isolate K057855_COVID474 collected_by PathCare collection_date 2023-08-18 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338620 SAMN38040121 K057838_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057838_COVID474 strain SARS-CoV-2 isolate K057838_COVID474 collected_by NHLS collection_date 2023-08-14 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338621 SAMN38040137 K057858_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057858_COVID474 strain SARS-CoV-2 isolate K057858_COVID474 collected_by PathCare collection_date 2023-08-21 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338622 SAMN38040119 K057853_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057853_COVID474 strain SARS-CoV-2 isolate K057853_COVID474 collected_by PathCare collection_date 2023-08-18 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338623 SAMN38040144 K057860_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057860_COVID474 strain SARS-CoV-2 isolate K057860_COVID474 collected_by PathCare collection_date missing geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338624 SAMN38040134 K057857_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057857_COVID474 strain SARS-CoV-2 isolate K057857_COVID474 collected_by PathCare collection_date 2023-08-21 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338625 SAMN38040120 K057861_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057861_COVID474 strain SARS-CoV-2 isolate K057861_COVID474 collected_by NHLS collection_date 2023-08-23 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338626 SAMN38040128 K057863_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057863_COVID474 strain SARS-CoV-2 isolate K057863_COVID474 collected_by PathCare collection_date missing geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338627 SAMN38040141 K057859_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057859_COVID474 strain SARS-CoV-2 isolate K057859_COVID474 collected_by PathCare collection_date missing geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338628 SAMN38040125 K057839_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057839_COVID474 strain SARS-CoV-2 isolate K057839_COVID474 collected_by NHLS collection_date 2023-08-10 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338629 SAMN38040124 K057862_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057862_COVID474 strain SARS-CoV-2 isolate K057862_COVID474 collected_by PathCare collection_date missing geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338630 SAMN38040129 K057840_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057840_COVID474 strain SARS-CoV-2 isolate K057840_COVID474 collected_by PathCare collection_date 2023-08-13 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338631 SAMN38040142 K057844_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057844_COVID474 strain SARS-CoV-2 isolate K057844_COVID474 collected_by PathCare collection_date 2023-08-16 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338632 SAMN38040118 K057845_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057845_COVID474 strain SARS-CoV-2 isolate K057845_COVID474 collected_by PathCare collection_date 2023-08-14 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338633 SAMN38040135 K057842_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057842_COVID474 strain SARS-CoV-2 isolate K057842_COVID474 collected_by PathCare collection_date 2023-08-21 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338634 SAMN38040139 K057843_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057843_COVID474 strain SARS-CoV-2 isolate K057843_COVID474 collected_by PathCare collection_date 2023-08-18 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated SRS19338635 SAMN38040132 K057841_COVID474-CERI-KRISP Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus sequencing in South Africa 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 636748 PRJNA636748 library_ID K057841_COVID474 strain SARS-CoV-2 isolate K057841_COVID474 collected_by PathCare collection_date 2023-08-13 geo_loc_name South Africa: Western Cape host Homo sapiens host_disease COVID-19 isolation_source Oropharyngeal swab lat_lon missing BioSampleModel SARS-CoV-2: clinical or host-associated