<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT accession="SRX22339433" alias="GSM7879998_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX22339433</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM7879998_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM7879998: Sample 1, GEX; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP469849">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP469849</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA1034986</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS19389082">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS19389082</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM7879998</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM7879998</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC SINGLE CELL</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Neutrophils were enriched from the lung of Balb/c animals infected with NTHi using magnetic beads. Single cells from the enriched neutrophil fraction were stained with pooled BioLegend TotalSeq-B antibodies. Stained cells were diluted in PBS with a final concentration of 1000 cells per µL. Stained cells were loaded into a single lane of 10X Chromium (Single Cell 3' V3). Library construction for both polyA RNA and surface protin was done using 10x Genomics Chromium Next GEM Single Cell 3ʹ Reagent Kits v3.1 with Feature Barcoding technology protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX22339434" alias="GSM7879999_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX22339434</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM7879999_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM7879999: Sample 1, ADT; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP469849">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP469849</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA1034986</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS19389083">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS19389083</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM7879999</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM7879999</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Neutrophils were enriched from the lung of Balb/c animals infected with NTHi using magnetic beads. Single cells from the enriched neutrophil fraction were stained with pooled BioLegend TotalSeq-B antibodies. Stained cells were diluted in PBS with a final concentration of 1000 cells per µL. Stained cells were loaded into a single lane of 10X Chromium (Single Cell 3' V3). Library construction for both polyA RNA and surface protin was done using 10x Genomics Chromium Next GEM Single Cell 3ʹ Reagent Kits v3.1 with Feature Barcoding technology protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
