Genomic surveillance of SARS-CoV-2 in South Africa

SRX23120570 SCV2-GS-C388 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074150 SCV2-GS-C388 SCV2-GS-C388 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120571 SCV2-GS-C419 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074151 SCV2-GS-C419 SCV2-GS-C419 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120572 SCV2-GS-C625 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074152 SCV2-GS-C625 SCV2-GS-C625 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120573 SCV2-GS-C641 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074153 SCV2-GS-C641 SCV2-GS-C641 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120574 SCV2-GS-C647 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074154 SCV2-GS-C647 SCV2-GS-C647 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120575 SCV2-GS-C650 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074155 SCV2-GS-C650 SCV2-GS-C650 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120576 SCV2-GS-C821 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074156 SCV2-GS-C821 SCV2-GS-C821 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120577 SCV2-GS-C950 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074157 SCV2-GS-C950 SCV2-GS-C950 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120578 SCV2-GS-C955 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074158 SCV2-GS-C955 SCV2-GS-C955 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120579 SCV2-GS-C963 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074159 SCV2-GS-C963 SCV2-GS-C963 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120580 SCV2-GS-D383 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074160 SCV2-GS-D383 SCV2-GS-D383 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120581 SCV2-GS-D506 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074161 SCV2-GS-D506 SCV2-GS-D506 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120582 SCV2-GS-C421 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074162 SCV2-GS-C421 SCV2-GS-C421 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120583 SCV2-GS-D598 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074163 SCV2-GS-D598 SCV2-GS-D598 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120584 SCV2-GS-D737 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074164 SCV2-GS-D737 SCV2-GS-D737 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120585 SCV2-GS-D922 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074165 SCV2-GS-D922 SCV2-GS-D922 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120586 SCV2-GS-E168 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074166 SCV2-GS-E168 SCV2-GS-E168 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120587 SCV2-GS-E169 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074167 SCV2-GS-E169 SCV2-GS-E169 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120588 SCV2-GS-C423 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074168 SCV2-GS-C423 SCV2-GS-C423 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120589 SCV2-GS-C426 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074169 SCV2-GS-C426 SCV2-GS-C426 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120590 SCV2-GS-C440 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074170 SCV2-GS-C440 SCV2-GS-C440 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120591 SCV2-GS-C446 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074171 SCV2-GS-C446 SCV2-GS-C446 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120592 SCV2-GS-C491 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074172 SCV2-GS-C491 SCV2-GS-C491 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120593 SCV2-GS-C492 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074173 SCV2-GS-C492 SCV2-GS-C492 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23120594 SCV2-GS-C521 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20074174 SCV2-GS-C521 SCV2-GS-C521 AMPLICON VIRAL RNA PCR Illumina MiSeq