Genomic surveillance of SARS-CoV-2 in South Africa

SRX23204855 SCV2-GP-6595 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129211 SCV2-GP-6595 SCV2-GP-6595 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204856 SCV2-GP-6600 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129212 SCV2-GP-6600 SCV2-GP-6600 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204857 SCV2-GP-6654 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129213 SCV2-GP-6654 SCV2-GP-6654 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204858 SCV2-GP-6976 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129214 SCV2-GP-6976 SCV2-GP-6976 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204859 SCV2-GP-K388 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129215 SCV2-GP-K388 SCV2-GP-K388 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204860 SCV2-GP-K406 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129216 SCV2-GP-K406 SCV2-GP-K406 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204861 SCV2-GP-K485 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129217 SCV2-GP-K485 SCV2-GP-K485 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204862 SCV2-GP-L405 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129218 SCV2-GP-L405 SCV2-GP-L405 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204863 SCV2-GP-L892 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129219 SCV2-GP-L892 SCV2-GP-L892 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204864 SCV2-GP-M345 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129220 SCV2-GP-M345 SCV2-GP-M345 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204865 SCV2-GP-M346 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129221 SCV2-GP-M346 SCV2-GP-M346 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204866 SCV2-GP-M348 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129222 SCV2-GP-M348 SCV2-GP-M348 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204867 SCV2-GP-6601 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129223 SCV2-GP-6601 SCV2-GP-6601 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204868 SCV2-GP-M351 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129224 SCV2-GP-M351 SCV2-GP-M351 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204869 SCV2-GP-M355 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129225 SCV2-GP-M355 SCV2-GP-M355 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204870 SCV2-GP-M357 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129226 SCV2-GP-M357 SCV2-GP-M357 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204871 SCV2-GP-M361 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129227 SCV2-GP-M361 SCV2-GP-M361 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204872 SCV2-GP-M362 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129228 SCV2-GP-M362 SCV2-GP-M362 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204873 SCV2-GP-6606 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129231 SCV2-GP-6606 SCV2-GP-6606 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204874 SCV2-GP-6609 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129229 SCV2-GP-6609 SCV2-GP-6609 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204875 SCV2-GP-6611 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129230 SCV2-GP-6611 SCV2-GP-6611 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204876 SCV2-GP-6613 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129232 SCV2-GP-6613 SCV2-GP-6613 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204877 SCV2-GP-6616 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129235 SCV2-GP-6616 SCV2-GP-6616 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204878 SCV2-GP-6650 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129233 SCV2-GP-6650 SCV2-GP-6650 AMPLICON VIRAL RNA PCR Illumina MiSeq SRX23204879 SCV2-GP-6653 Genomic surveillance of SARS-CoV-2 in South Africa SRP393871 PRJNA805055 CovidSeq_lib_prep_ArticV4.1 sequencing SRS20129234 SCV2-GP-6653 SCV2-GP-6653 AMPLICON VIRAL RNA PCR Illumina MiSeq