<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT accession="SRX23307098" alias="GSM8023252_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX23307098</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM8023252_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM8023252: PC52_Tissue; Homo sapiens; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP484642">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP484642</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA1066286</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS20183678">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS20183678</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM8023252</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM8023252</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC SINGLE CELL</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Patient tumor tissue were dissociated using collagenase and DNase. Patient-derived PCO, and mixed PCO-CAF were dissociated using TrypLE™ Express (Thermo Fisher Scientific). Then, scRNA were performed after cell counting and viability analysis. Single-cell RNA sequencing was performed by using the Chromium Next GEM Single Cell 3' Reagent Kits (10x Genomics Inc., Pleasanton, CA, USA) and was sequenced on a Novaseq 6000 platform according to the manufacturer's instructions</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX23307099" alias="GSM8023254_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX23307099</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM8023254_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM8023254: PC52_Organoid; Homo sapiens; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP484642">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP484642</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA1066286</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS20183679">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS20183679</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM8023254</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM8023254</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC SINGLE CELL</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Patient tumor tissue were dissociated using collagenase and DNase. Patient-derived PCO, and mixed PCO-CAF were dissociated using TrypLE™ Express (Thermo Fisher Scientific). Then, scRNA were performed after cell counting and viability analysis. Single-cell RNA sequencing was performed by using the Chromium Next GEM Single Cell 3' Reagent Kits (10x Genomics Inc., Pleasanton, CA, USA) and was sequenced on a Novaseq 6000 platform according to the manufacturer's instructions</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX23307100" alias="GSM8023256_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX23307100</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM8023256_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM8023256: PC52_Mixed; Homo sapiens; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP484642">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP484642</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA1066286</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS20183677">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS20183677</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM8023256</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM8023256</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC SINGLE CELL</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Patient tumor tissue were dissociated using collagenase and DNase. Patient-derived PCO, and mixed PCO-CAF were dissociated using TrypLE™ Express (Thermo Fisher Scientific). Then, scRNA were performed after cell counting and viability analysis. Single-cell RNA sequencing was performed by using the Chromium Next GEM Single Cell 3' Reagent Kits (10x Genomics Inc., Pleasanton, CA, USA) and was sequenced on a Novaseq 6000 platform according to the manufacturer's instructions</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
