SRX23343659 K059814_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205512 K059814_COVID480 K059814_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343660 K059815_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205513 K059815_COVID480 K059815_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343661 K059824_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205514 K059824_COVID480 K059824_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343662 K060336_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205515 K060336_COVID482 K060336_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343663 K060304_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205516 K060304_COVID482 K060304_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343664 K060312_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205517 K060312_COVID482 K060312_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343665 K060320_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205518 K060320_COVID482 K060320_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343666 K060329_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205519 K060329_COVID482 K060329_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343667 K060305_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205520 K060305_COVID482 K060305_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343668 K060313_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205521 K060313_COVID482 K060313_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343669 K060321_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205522 K060321_COVID482 K060321_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343670 K060330_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205523 K060330_COVID482 K060330_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343671 K060306_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205524 K060306_COVID482 K060306_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343672 K059825_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205525 K059825_COVID480 K059825_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343673 K060314_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205526 K060314_COVID482 K060314_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343674 K060322_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205527 K060322_COVID482 K060322_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343675 K060331_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205528 K060331_COVID482 K060331_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343676 K060307__COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205529 K060307__COVID482 K060307__COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343677 K060315_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205531 K060315_COVID482 K060315_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343678 K060323_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205530 K060323_COVID482 K060323_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343679 K060332_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205532 K060332_COVID482 K060332_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343680 K060308_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205533 K060308_COVID482 K060308_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343681 K060316_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205534 K060316_COVID482 K060316_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343682 K060324_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205535 K060324_COVID482 K060324_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343683 K059817_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205536 K059817_COVID480 K059817_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343684 K059844_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205537 K059844_COVID480 K059844_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343685 K059845_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205538 K059845_COVID480 K059845_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343686 K059846_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205539 K059846_COVID480 K059846_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343687 K059847_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205540 K059847_COVID480 K059847_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343688 K059848_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205541 K059848_COVID480 K059848_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343689 K059849_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205542 K059849_COVID480 K059849_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343690 K059850_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205543 K059850_COVID480 K059850_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343691 K059851_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205544 K059851_COVID480 K059851_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343692 K059852_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205545 K059852_COVID480 K059852_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343693 K059853_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205546 K059853_COVID480 K059853_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343694 K059818_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205547 K059818_COVID480 K059818_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343695 K059854_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205548 K059854_COVID480 K059854_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343696 K059855_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205549 K059855_COVID480 K059855_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343697 K059856_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205550 K059856_COVID480 K059856_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343698 K059857_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205551 K059857_COVID480 K059857_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343699 K059858_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205552 K059858_COVID480 K059858_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343700 K059859_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205554 K059859_COVID480 K059859_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343701 K059860_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205553 K059860_COVID480 K059860_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343702 K059861_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205555 K059861_COVID480 K059861_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343703 K059862_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205556 K059862_COVID480 K059862_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343704 K059863_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205557 K059863_COVID480 K059863_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343705 K059819_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205559 K059819_COVID480 K059819_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343706 K059864_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205558 K059864_COVID480 K059864_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343707 K060335_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205560 K060335_COVID482 K060335_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343708 K060303_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205562 K060303_COVID482 K060303_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343709 K060311_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205561 K060311_COVID482 K060311_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343710 K060319_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205563 K060319_COVID482 K060319_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343711 K060328_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205564 K060328_COVID482 K060328_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343712 K059826_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205565 K059826_COVID480 K059826_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343713 K060333_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205566 K060333_COVID482 K060333_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343714 K060309_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205567 K060309_COVID482 K060309_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343715 K060317_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205568 K060317_COVID482 K060317_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343716 K060325_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205569 K060325_COVID482 K060325_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343717 K060334_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205570 K060334_COVID482 K060334_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343718 K059827_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205571 K059827_COVID480 K059827_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343719 K059828_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205572 K059828_COVID480 K059828_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343720 K059829_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205573 K059829_COVID480 K059829_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343721 K059830_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205574 K059830_COVID480 K059830_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343722 K059831_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205575 K059831_COVID480 K059831_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343723 K059832_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205576 K059832_COVID480 K059832_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343724 K059833_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205577 K059833_COVID480 K059833_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343725 K059816_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205579 K059816_COVID480 K059816_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343726 K059834_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205578 K059834_COVID480 K059834_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343727 K059835_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205580 K059835_COVID480 K059835_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343728 K059836_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205581 K059836_COVID480 K059836_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343729 K059837_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205582 K059837_COVID480 K059837_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343730 K059838_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205584 K059838_COVID480 K059838_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343731 K059839_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205583 K059839_COVID480 K059839_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343732 K059840_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205585 K059840_COVID480 K059840_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343733 K059841_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205586 K059841_COVID480 K059841_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343734 K059842_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205587 K059842_COVID480 K059842_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343735 K059843_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205588 K059843_COVID480 K059843_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343736 K059887_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205589 K059887_COVID480 K059887_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343737 K059888_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205590 K059888_COVID480 K059888_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343738 K059889_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205591 K059889_COVID480 K059889_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343739 K059890_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205592 K059890_COVID480 K059890_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343740 K059891_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205593 K059891_COVID480 K059891_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343741 K059892_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205594 K059892_COVID480 K059892_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343742 K059893_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205595 K059893_COVID480 K059893_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343743 K059822_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205596 K059822_COVID480 K059822_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343744 K059894_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205597 K059894_COVID480 K059894_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343745 K059895_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205598 K059895_COVID480 K059895_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343746 K059896_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205599 K059896_COVID480 K059896_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343747 K059897_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205600 K059897_COVID480 K059897_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343748 K059898_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205601 K059898_COVID480 K059898_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343749 K059899_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205602 K059899_COVID480 K059899_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343750 K059900_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205603 K059900_COVID480 K059900_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343751 K059901_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205604 K059901_COVID480 K059901_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343752 K059902_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205605 K059902_COVID480 K059902_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343753 K059903_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205606 K059903_COVID480 K059903_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343754 K059823_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205607 K059823_COVID480 K059823_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343755 K059904_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205608 K059904_COVID480 K059904_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343756 K060302_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205610 K060302_COVID482 K060302_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343757 K060310_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205609 K060310_COVID482 K060310_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343758 K060318_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205612 K060318_COVID482 K060318_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343759 K060327_COVID482 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205611 K060327_COVID482 K060327_COVID482 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343760 K059865_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205613 K059865_COVID480 K059865_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343761 K059866_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205614 K059866_COVID480 K059866_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343762 K059867_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205615 K059867_COVID480 K059867_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343763 K059868_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205616 K059868_COVID480 K059868_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343764 K059869_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205617 K059869_COVID480 K059869_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343765 K059870_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205618 K059870_COVID480 K059870_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343766 K059871_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205619 K059871_COVID480 K059871_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343767 K059872_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205620 K059872_COVID480 K059872_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343768 K059873_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205621 K059873_COVID480 K059873_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343769 K059820_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205622 K059820_COVID480 K059820_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343770 K059874_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205623 K059874_COVID480 K059874_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343771 K059875_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205624 K059875_COVID480 K059875_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343772 K059876_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205625 K059876_COVID480 K059876_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343773 K059877_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205626 K059877_COVID480 K059877_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343774 K059878_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205627 K059878_COVID480 K059878_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343775 K059879_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205628 K059879_COVID480 K059879_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343776 K059880_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205629 K059880_COVID480 K059880_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343777 K059881_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205630 K059881_COVID480 K059881_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343778 K059882_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205631 K059882_COVID480 K059882_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343779 K059883_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205632 K059883_COVID480 K059883_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343780 K059821_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205633 K059821_COVID480 K059821_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343781 K059884_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205634 K059884_COVID480 K059884_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343782 K059885_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205635 K059885_COVID480 K059885_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq SRX23343783 K059886_COVID480 SRP265610 PRJNA636748 Amplicons were generated using the COVIDseq assay. Libraries were prepared according to the manufacturer's instructions using the Illumina Nextera UD indexes. Libraries were run on the Illumina MiSeq. SRS20205636 K059886_COVID480 K059886_COVID480 AMPLICON VIRAL RNA RT-PCR Illumina MiSeq