SRS20293747 SAMN39661226 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459655 isolation_source patient isolate gisaid_accession EPI_ISL_18819201 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459655/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293749 SAMN39661236 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459750 isolation_source patient isolate gisaid_accession EPI_ISL_18819211 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459750/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293750 SAMN39661227 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459658 isolation_source patient isolate gisaid_accession EPI_ISL_18819202 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459658/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293751 SAMN39661324 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719868 isolation_source patient isolate gisaid_accession EPI_ISL_18819297 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719868/2021 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293752 SAMN39661322 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719862 isolation_source patient isolate gisaid_accession EPI_ISL_18819295 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719862/2021 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293753 SAMN39661349 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719759 isolation_source patient isolate gisaid_accession EPI_ISL_18819321 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719759/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293754 SAMN39661352 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719720 isolation_source patient isolate gisaid_accession EPI_ISL_18819324 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719720/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293755 SAMN39661319 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719881 isolation_source patient isolate gisaid_accession EPI_ISL_18819292 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719881/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293756 SAMN39661343 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719763 isolation_source patient isolate gisaid_accession EPI_ISL_18819315 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719763/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293757 SAMN39661344 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719775 isolation_source patient isolate gisaid_accession EPI_ISL_18819316 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719775/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293758 SAMN39661335 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719668 isolation_source patient isolate gisaid_accession EPI_ISL_18819307 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719668/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293759 SAMN39661237 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459753 isolation_source patient isolate gisaid_accession EPI_ISL_18819212 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459753/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293760 SAMN39661346 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719755 isolation_source patient isolate gisaid_accession EPI_ISL_18819318 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719755/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293761 SAMN39661329 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719743 isolation_source patient isolate gisaid_accession EPI_ISL_18819302 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719743/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293762 SAMN39661338 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719751 isolation_source patient isolate gisaid_accession EPI_ISL_18819310 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719751/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293763 SAMN39661334 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719806 isolation_source patient isolate gisaid_accession EPI_ISL_18819306 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719806/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293764 SAMN39661339 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719839 isolation_source patient isolate gisaid_accession EPI_ISL_18819311 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719839/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293765 SAMN39661330 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719672 isolation_source patient isolate gisaid_accession EPI_ISL_18819303 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719672/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293766 SAMN39661342 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719907 isolation_source patient isolate gisaid_accession EPI_ISL_18819314 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719907/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293767 SAMN39661333 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719664 isolation_source patient isolate gisaid_accession EPI_ISL_18823746 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719664/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293768 SAMN39661350 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719700 isolation_source patient isolate gisaid_accession EPI_ISL_18819322 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719700/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293769 SAMN39661347 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719747 isolation_source patient isolate gisaid_accession EPI_ISL_18819319 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719747/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293771 SAMN39661323 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719704 isolation_source patient isolate gisaid_accession EPI_ISL_18819296 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719704/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293772 SAMN39661238 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459756 isolation_source patient isolate gisaid_accession EPI_ISL_18819213 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459756/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293773 SAMN39661332 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719911 isolation_source patient isolate gisaid_accession EPI_ISL_18819305 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719911/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293774 SAMN39661336 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719739 isolation_source patient isolate gisaid_accession EPI_ISL_18819308 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719739/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293775 SAMN39661328 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719791 isolation_source patient isolate gisaid_accession EPI_ISL_18819301 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719791/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293776 SAMN39661331 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719903 isolation_source patient isolate gisaid_accession EPI_ISL_18819304 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719903/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293777 SAMN39661345 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719802 isolation_source patient isolate gisaid_accession EPI_ISL_18819317 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719802/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293778 SAMN39661353 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-04-14 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719990 isolation_source patient isolate gisaid_accession EPI_ISL_18819325 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719990/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293779 SAMN39661354 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-04-14 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35720038 isolation_source patient isolate gisaid_accession EPI_ISL_18819326 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35720038/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293780 SAMN39661341 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719962 isolation_source patient isolate gisaid_accession EPI_ISL_18819313 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719962/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293782 SAMN39661348 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719833 isolation_source patient isolate gisaid_accession EPI_ISL_18819320 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719833/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293783 SAMN39661239 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459759 isolation_source patient isolate gisaid_accession EPI_ISL_18819214 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459759/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293784 SAMN39661355 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-04-14 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35720034 isolation_source patient isolate gisaid_accession EPI_ISL_18819327 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35720034/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293785 SAMN39661356 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-04-14 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719978 isolation_source patient isolate gisaid_accession EPI_ISL_18819328 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719978/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293786 SAMN39661357 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-04-15 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719982 isolation_source patient isolate gisaid_accession EPI_ISL_18819329 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719982/2022 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293787 SAMN39661240 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-12 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459762 isolation_source patient isolate gisaid_accession EPI_ISL_18819215 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459762/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293788 SAMN39661244 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459773 isolation_source patient isolate gisaid_accession EPI_ISL_18819219 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459773/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293789 SAMN39661242 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459767 isolation_source patient isolate gisaid_accession EPI_ISL_18819217 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459767/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293790 SAMN39661241 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459764 isolation_source patient isolate gisaid_accession EPI_ISL_18819216 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459764/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293792 SAMN39661245 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-12 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459776 isolation_source patient isolate gisaid_accession EPI_ISL_18819220 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459776/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293794 SAMN39661250 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459787 isolation_source patient isolate gisaid_accession EPI_ISL_18819225 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459787/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293796 SAMN39661247 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459781 isolation_source patient isolate gisaid_accession EPI_ISL_18819222 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459781/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293798 SAMN39661251 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459789 isolation_source patient isolate gisaid_accession EPI_ISL_18819226 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459789/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293800 SAMN39661252 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459792 isolation_source patient isolate gisaid_accession EPI_ISL_18819227 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459792/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293802 SAMN39661255 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459804 isolation_source patient isolate gisaid_accession EPI_ISL_18819230 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459804/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293804 SAMN39661258 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-12 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459811 isolation_source patient isolate gisaid_accession EPI_ISL_18819233 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459811/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293806 SAMN39661256 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459806 isolation_source patient isolate gisaid_accession EPI_ISL_18819231 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459806/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293808 SAMN39661229 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459683 isolation_source patient isolate gisaid_accession EPI_ISL_18819204 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459683/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293810 SAMN39661261 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459820 isolation_source patient isolate gisaid_accession EPI_ISL_18819236 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459820/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293812 SAMN39661264 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459828 isolation_source patient isolate gisaid_accession EPI_ISL_18819239 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459828/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293814 SAMN39661230 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459686 isolation_source patient isolate gisaid_accession EPI_ISL_18819205 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459686/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293816 SAMN39661268 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459840 isolation_source patient isolate gisaid_accession EPI_ISL_18819242 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459840/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293818 SAMN39661271 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459849 isolation_source patient isolate gisaid_accession EPI_ISL_18819245 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459849/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293820 SAMN39661269 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459843 isolation_source patient isolate gisaid_accession EPI_ISL_18819243 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459843/2023 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293822 SAMN39661272 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459851 isolation_source patient isolate gisaid_accession EPI_ISL_18819246 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459851/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293824 SAMN39661275 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-14 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459860 isolation_source patient isolate gisaid_accession EPI_ISL_18819249 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459860/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293826 SAMN39661278 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459867 isolation_source patient isolate gisaid_accession EPI_ISL_18819251 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459867/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293828 SAMN39661274 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-14 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459857 isolation_source patient isolate gisaid_accession EPI_ISL_18819248 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459857/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293830 SAMN39661277 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459864 isolation_source patient isolate gisaid_accession EPI_ISL_18828465 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459864/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293832 SAMN39661281 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459876 isolation_source patient isolate gisaid_accession EPI_ISL_18819254 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459876/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293834 SAMN39661283 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459882 isolation_source patient isolate gisaid_accession EPI_ISL_18819256 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459882/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293781 SAMN39661325 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2022-01-19 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719939 isolation_source patient isolate gisaid_accession EPI_ISL_18819298 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719939/2022 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293791 SAMN39661243 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459770 isolation_source patient isolate gisaid_accession EPI_ISL_18819218 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459770/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293793 SAMN39661228 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459660 isolation_source patient isolate gisaid_accession EPI_ISL_18819203 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459660/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293795 SAMN39661246 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459779 isolation_source patient isolate gisaid_accession EPI_ISL_18819221 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459779/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293797 SAMN39661248 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459783 isolation_source patient isolate gisaid_accession EPI_ISL_18819223 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459783/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293799 SAMN39661249 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459785 isolation_source patient isolate gisaid_accession EPI_ISL_18819224 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459785/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293801 SAMN39661259 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459814 isolation_source patient isolate gisaid_accession EPI_ISL_18819234 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459814/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293803 SAMN39661253 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459795 isolation_source patient isolate gisaid_accession EPI_ISL_18819228 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459795/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293805 SAMN39661254 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-12 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459800 isolation_source patient isolate gisaid_accession EPI_ISL_18819229 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459800/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293807 SAMN39661260 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459817 isolation_source patient isolate gisaid_accession EPI_ISL_18819235 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459817/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293809 SAMN39661257 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459809 isolation_source patient isolate gisaid_accession EPI_ISL_18819232 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459809/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293811 SAMN39661262 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459823 isolation_source patient isolate gisaid_accession EPI_ISL_18819237 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459823/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293813 SAMN39661263 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459826 isolation_source patient isolate gisaid_accession EPI_ISL_18819238 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459826/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293815 SAMN39661265 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459831 isolation_source patient isolate gisaid_accession EPI_ISL_18819240 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459831/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293817 SAMN39661267 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459837 isolation_source patient isolate gisaid_accession EPI_ISL_18828464 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459837/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293819 SAMN39661266 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459834 isolation_source patient isolate gisaid_accession EPI_ISL_18819241 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459834/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293821 SAMN39661270 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-14 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459846 isolation_source patient isolate gisaid_accession EPI_ISL_18819244 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459846/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293823 SAMN39661276 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-14 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459862 isolation_source patient isolate gisaid_accession EPI_ISL_18819250 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459862/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293825 SAMN39661231 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459689 isolation_source patient isolate gisaid_accession EPI_ISL_18819206 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459689/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293827 SAMN39661273 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-15 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459854 isolation_source patient isolate gisaid_accession EPI_ISL_18819247 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459854/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293829 SAMN39661280 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459873 isolation_source patient isolate gisaid_accession EPI_ISL_18819253 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459873/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293831 SAMN39661279 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459870 isolation_source patient isolate gisaid_accession EPI_ISL_18819252 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459870/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293833 SAMN39661282 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-10 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459879 isolation_source patient isolate gisaid_accession EPI_ISL_18819255 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459879/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293835 SAMN39661286 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459889 isolation_source patient isolate gisaid_accession EPI_ISL_18819259 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459889/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293836 SAMN39661289 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-01-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459897 isolation_source patient isolate gisaid_accession EPI_ISL_18819262 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459897/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293837 SAMN39661284 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459885 isolation_source patient isolate gisaid_accession EPI_ISL_18819257 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459885/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293838 SAMN39661232 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459692 isolation_source patient isolate gisaid_accession EPI_ISL_18819207 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459692/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293839 SAMN39661290 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459900 isolation_source patient isolate gisaid_accession EPI_ISL_18819263 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459900/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293840 SAMN39661288 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459895 isolation_source patient isolate gisaid_accession EPI_ISL_18819261 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459895/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293841 SAMN39661287 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459892 isolation_source patient isolate gisaid_accession EPI_ISL_18819260 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459892/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293842 SAMN39661285 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-01-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459887 isolation_source patient isolate gisaid_accession EPI_ISL_18819258 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459887/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293843 SAMN39661295 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459914 isolation_source patient isolate gisaid_accession EPI_ISL_18819268 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459914/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293844 SAMN39661233 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459694 isolation_source patient isolate gisaid_accession EPI_ISL_18819208 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459694/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293845 SAMN39661292 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-01 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459905 isolation_source patient isolate gisaid_accession EPI_ISL_18819265 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459905/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293846 SAMN39661294 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459911 isolation_source patient isolate gisaid_accession EPI_ISL_18819267 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459911/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293847 SAMN39661291 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-01-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459903 isolation_source patient isolate gisaid_accession EPI_ISL_18819264 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459903/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293848 SAMN39661293 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-01-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459908 isolation_source patient isolate gisaid_accession EPI_ISL_18819266 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459908/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293849 SAMN39661297 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-12 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459920 isolation_source patient isolate gisaid_accession EPI_ISL_18819270 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459920/2023 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293850 SAMN39661298 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459923 isolation_source patient isolate gisaid_accession EPI_ISL_18819271 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459923/2023 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293851 SAMN39661301 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-14 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459931 isolation_source patient isolate gisaid_accession EPI_ISL_18819274 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459931/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293852 SAMN39661296 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459916 isolation_source patient isolate gisaid_accession EPI_ISL_18819269 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459916/2023 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293853 SAMN39661299 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459925 isolation_source patient isolate gisaid_accession EPI_ISL_18819272 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459925/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293854 SAMN39661303 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459936 isolation_source patient isolate gisaid_accession EPI_ISL_18819276 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459936/2023 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293855 SAMN39661302 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-13 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459934 isolation_source patient isolate gisaid_accession EPI_ISL_18819275 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459934/2023 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293856 SAMN39661300 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459928 isolation_source patient isolate gisaid_accession EPI_ISL_18819273 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459928/2023 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293857 SAMN39661305 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-07 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459941 isolation_source patient isolate gisaid_accession EPI_ISL_18819278 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459941/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293858 SAMN39661234 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-08 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459745 isolation_source patient isolate gisaid_accession EPI_ISL_18819209 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459745/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293859 SAMN39661304 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459939 isolation_source patient isolate gisaid_accession EPI_ISL_18819277 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459939/2023 sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293860 SAMN39661306 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-09 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459944 isolation_source patient isolate gisaid_accession EPI_ISL_18819279 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459944/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293861 SAMN39661307 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-17 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459947 isolation_source patient isolate gisaid_accession EPI_ISL_18819280 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459947/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293862 SAMN39661310 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459955 isolation_source patient isolate gisaid_accession EPI_ISL_18819283 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459955/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293863 SAMN39661308 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-06 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459950 isolation_source patient isolate gisaid_accession EPI_ISL_18819281 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459950/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293864 SAMN39661309 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-04 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459952 isolation_source patient isolate gisaid_accession EPI_ISL_18819282 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459952/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293865 SAMN39661311 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-02 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459958 isolation_source patient isolate gisaid_accession EPI_ISL_18819284 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459958/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293866 SAMN39661312 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-03 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459960 isolation_source patient isolate gisaid_accession EPI_ISL_18819285 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459960/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293867 SAMN39661315 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-14 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459968 isolation_source patient isolate gisaid_accession EPI_ISL_18819288 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459968/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293868 SAMN39661313 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-11 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459963 isolation_source patient isolate gisaid_accession EPI_ISL_18819286 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459963/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293869 SAMN39661314 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-12 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459966 isolation_source patient isolate gisaid_accession EPI_ISL_18819287 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459966/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293870 SAMN39661235 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2023-02-05 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-40459747 isolation_source patient isolate gisaid_accession EPI_ISL_18819210 gisaid_virus_name hCoV-19/USA/CO-CDPHE-40459747/2023 purpose_of_sequencing Baseline surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293871 SAMN39661320 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719874 isolation_source patient isolate gisaid_accession EPI_ISL_18819293 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719874/2021 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293872 SAMN39661326 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719798 isolation_source patient isolate gisaid_accession EPI_ISL_18819299 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719798/2021 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293873 SAMN39661340 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-27 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719779 isolation_source patient isolate gisaid_accession EPI_ISL_18819312 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719779/2021 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293874 SAMN39661327 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-28 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719915 isolation_source patient isolate gisaid_accession EPI_ISL_18819300 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719915/2021 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293875 SAMN39661337 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-28 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719857 isolation_source patient isolate gisaid_accession EPI_ISL_18819309 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719857/2021 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293876 SAMN39661317 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719919 isolation_source patient isolate gisaid_accession EPI_ISL_18819290 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719919/2021 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293877 SAMN39661318 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-31 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719923 isolation_source patient isolate gisaid_accession EPI_ISL_18819291 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719923/2021 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293878 SAMN39661321 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719947 isolation_source patient isolate gisaid_accession EPI_ISL_18819294 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719947/2021 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293879 SAMN39661351 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-29 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719954 isolation_source patient isolate gisaid_accession EPI_ISL_18819323 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719954/2021 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated SRS20293880 SAMN39661316 PCR tiled amplicon WGS of SARS-CoV-2 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 686984 collected_by Colorado Department of Public Health and Environment collection_date 2021-12-30 geo_loc_name USA: Colorado host Homo sapiens host_disease severe acute respiratory syndrome isolate CO-CDPHE-35719899 isolation_source patient isolate gisaid_accession EPI_ISL_18819289 gisaid_virus_name hCoV-19/USA/CO-CDPHE-35719899/2021 purpose_of_sampling Sentinel surveillance sequenced_by Colorado Department of Public Health and Environment BioSampleModel SARS-CoV-2: clinical or host-associated