<?xml version="1.0" encoding="UTF-8"?>
<SAMPLE_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <SAMPLE alias="CFSANSMP000129623" accession="SRS20418470">
    <IDENTIFIERS>
      <PRIMARY_ID>SRS20418470</PRIMARY_ID>
      <EXTERNAL_ID namespace="BioSample">SAMN39735444</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>SARS-CoV-2: wastewater surveillance</TITLE>
    <SAMPLE_NAME>
      <TAXON_ID>527639</TAXON_ID>
      <SCIENTIFIC_NAME>wastewater metagenome</SCIENTIFIC_NAME>
    </SAMPLE_NAME>
    <SAMPLE_LINKS>
      <SAMPLE_LINK>
        <URL_LINK>
          <LABEL/>
          <URL/>
        </URL_LINK>
      </SAMPLE_LINK>
      <SAMPLE_LINK>
        <XREF_LINK>
          <DB>bioproject</DB>
          <ID>769412</ID>
          <LABEL>PRJNA769412</LABEL>
        </XREF_LINK>
      </SAMPLE_LINK>
    </SAMPLE_LINKS>
    <SAMPLE_ATTRIBUTES>
      <SAMPLE_ATTRIBUTE>
        <TAG>collected_by</TAG>
        <VALUE>Virginia Division of Consolidated Laboratory Services</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>collection_date</TAG>
        <VALUE>2022-06-01</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>geo_loc_name</TAG>
        <VALUE>USA: Virginia</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>lat_lon</TAG>
        <VALUE>missing</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ww_sample_matrix</TAG>
        <VALUE>post grit removal</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>purpose_of_ww_sampling</TAG>
        <VALUE>public health surveillance community-level</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ww_sample_site</TAG>
        <VALUE>wastewater treatment plant</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ww_sample_type</TAG>
        <VALUE>composite</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ww_flow</TAG>
        <VALUE>2970000</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ww_population</TAG>
        <VALUE>16563</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>isolation_source</TAG>
        <VALUE>wastewater</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>sample_name</TAG>
        <VALUE>V_wk5_repB</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>sample_title</TAG>
        <VALUE>SARS-CoV-2: wastewater surveillance</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>organism</TAG>
        <VALUE>wastewater metagenome</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>specimen_processing</TAG>
        <VALUE>technical replicate</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>specimen_processing_id</TAG>
        <VALUE>DCLS_SMP_WW12_WK38_B</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>specimen_processing_details</TAG>
        <VALUE>Technical replicate of sample name listed in specimen_processing_id, processed by collecting lab. Excess wastewater frozen, shipped to FDA-CFSAN on dry ice. Thawed wastewater split into two tech. reps. by FDA-CFSAN</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ww_surv_system_sample_id</TAG>
        <VALUE>CFSANSMP000129623</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>collection_site_id</TAG>
        <VALUE>51069</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ww_sample_duration</TAG>
        <VALUE>24</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ww_surv_jurisdiction</TAG>
        <VALUE>VA</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>purpose_of_ww_sequencing</TAG>
        <VALUE>longread sequencing methods development</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ww_instantaneous_flow</TAG>
        <VALUE>Not Provided</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>collection_volume</TAG>
        <VALUE>100mL</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>concentration_method</TAG>
        <VALUE>promega wastewater large volume tna capture kit</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>extraction_method</TAG>
        <VALUE>promega automated tna kit</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>extraction_control</TAG>
        <VALUE>Not Applicable</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ww_industrial_effluent_percent</TAG>
        <VALUE>Not Provided</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ww_ph</TAG>
        <VALUE>7.9</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ww_population_source</TAG>
        <VALUE>population of jurisdiction encompassing the wastewater service area</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ww_pre_treatment</TAG>
        <VALUE>Not Applicable</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ww_primary_sludge_retention_time</TAG>
        <VALUE>Not Provided</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ww_sample_salinity</TAG>
        <VALUE>Not Provided</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ww_surv_target_1</TAG>
        <VALUE>SARS-CoV-2</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ww_surv_target_1_known_present</TAG>
        <VALUE>yes</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ww_temperature</TAG>
        <VALUE>22</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>project_name</TAG>
        <VALUE>GenomeTrakr</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>BioSampleModel</TAG>
        <VALUE>SARS-CoV-2: wastewater surveillance</VALUE>
      </SAMPLE_ATTRIBUTE>
    </SAMPLE_ATTRIBUTES>
  </SAMPLE>
</SAMPLE_SET>
