<STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625749"> <IDENTIFIERS> <PRIMARY_ID>SRS20625749</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098431/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802787" alias="LC1098433"> <IDENTIFIERS> <PRIMARY_ID>SRX23802787</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098433</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625750"> <IDENTIFIERS> <PRIMARY_ID>SRS20625750</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098433/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802788" alias="LC1098758"> <IDENTIFIERS> <PRIMARY_ID>SRX23802788</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098758</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625751"> <IDENTIFIERS> <PRIMARY_ID>SRS20625751</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098758/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802789" alias="LC1098762"> <IDENTIFIERS> <PRIMARY_ID>SRX23802789</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098762</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625754"> <IDENTIFIERS> <PRIMARY_ID>SRS20625754</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098762/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802790" alias="LC1098768"> <IDENTIFIERS> <PRIMARY_ID>SRX23802790</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098768</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625752"> <IDENTIFIERS> <PRIMARY_ID>SRS20625752</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098768/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802791" alias="LC1098772"> <IDENTIFIERS> <PRIMARY_ID>SRX23802791</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098772</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625753"> <IDENTIFIERS> <PRIMARY_ID>SRS20625753</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098772/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802792" alias="LC1098774"> <IDENTIFIERS> <PRIMARY_ID>SRX23802792</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098774</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625755"> <IDENTIFIERS> <PRIMARY_ID>SRS20625755</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1098774/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802793" alias="LC1098775"> <IDENTIFIERS> <PRIMARY_ID>SRX23802793</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098775</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625756"> <IDENTIFIERS> <PRIMARY_ID>SRS20625756</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098775/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802794" alias="LC1098777"> <IDENTIFIERS> <PRIMARY_ID>SRX23802794</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098777</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625757"> <IDENTIFIERS> <PRIMARY_ID>SRS20625757</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098777/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802795" alias="LC1098778"> <IDENTIFIERS> <PRIMARY_ID>SRX23802795</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098778</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625759"> <IDENTIFIERS> <PRIMARY_ID>SRS20625759</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098778/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802796" alias="LC1098783"> <IDENTIFIERS> <PRIMARY_ID>SRX23802796</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098783</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625758"> <IDENTIFIERS> <PRIMARY_ID>SRS20625758</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098783/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802797" alias="LC1098787"> <IDENTIFIERS> <PRIMARY_ID>SRX23802797</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098787</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625760"> <IDENTIFIERS> <PRIMARY_ID>SRS20625760</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098787/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802798" alias="LC1098788"> <IDENTIFIERS> <PRIMARY_ID>SRX23802798</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098788</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625761"> <IDENTIFIERS> <PRIMARY_ID>SRS20625761</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098788/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802799" alias="LC1098790"> <IDENTIFIERS> <PRIMARY_ID>SRX23802799</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098790</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625762"> <IDENTIFIERS> <PRIMARY_ID>SRS20625762</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098790/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802800" alias="LC1098792"> <IDENTIFIERS> <PRIMARY_ID>SRX23802800</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098792</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625764"> <IDENTIFIERS> <PRIMARY_ID>SRS20625764</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098792/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802801" alias="LC1098794"> <IDENTIFIERS> <PRIMARY_ID>SRX23802801</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098794</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625763"> <IDENTIFIERS> <PRIMARY_ID>SRS20625763</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098794/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802802" alias="LC1098795"> <IDENTIFIERS> <PRIMARY_ID>SRX23802802</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098795</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625765"> <IDENTIFIERS> <PRIMARY_ID>SRS20625765</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098795/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802803" alias="LC1098796"> <IDENTIFIERS> <PRIMARY_ID>SRX23802803</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098796</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625770"> <IDENTIFIERS> <PRIMARY_ID>SRS20625770</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098796/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802804" alias="LC1098798"> <IDENTIFIERS> <PRIMARY_ID>SRX23802804</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098798</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625766"> <IDENTIFIERS> <PRIMARY_ID>SRS20625766</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098798/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802805" alias="LC1098799"> <IDENTIFIERS> <PRIMARY_ID>SRX23802805</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098799</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625767"> <IDENTIFIERS> <PRIMARY_ID>SRS20625767</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098799/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802806" alias="LC1098800"> <IDENTIFIERS> <PRIMARY_ID>SRX23802806</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098800</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625768"> <IDENTIFIERS> <PRIMARY_ID>SRS20625768</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098800/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802807" alias="LC1098801"> <IDENTIFIERS> <PRIMARY_ID>SRX23802807</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098801</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625769"> <IDENTIFIERS> <PRIMARY_ID>SRS20625769</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098801/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802808" alias="LC1098802"> <IDENTIFIERS> <PRIMARY_ID>SRX23802808</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098802</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625772"> <IDENTIFIERS> <PRIMARY_ID>SRS20625772</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098802/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802809" alias="LC1098807"> <IDENTIFIERS> <PRIMARY_ID>SRX23802809</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098807</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625771"> <IDENTIFIERS> <PRIMARY_ID>SRS20625771</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MA-CDC-LC1098807/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802810" alias="LC1098814"> <IDENTIFIERS> <PRIMARY_ID>SRX23802810</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098814</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625773"> <IDENTIFIERS> <PRIMARY_ID>SRS20625773</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098814/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802811" alias="LC1098818"> <IDENTIFIERS> <PRIMARY_ID>SRX23802811</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098818</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625774"> <IDENTIFIERS> <PRIMARY_ID>SRS20625774</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098818/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802812" alias="LC1098822"> <IDENTIFIERS> <PRIMARY_ID>SRX23802812</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098822</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625777"> <IDENTIFIERS> <PRIMARY_ID>SRS20625777</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098822/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802813" alias="LC1098830"> <IDENTIFIERS> <PRIMARY_ID>SRX23802813</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098830</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625775"> <IDENTIFIERS> <PRIMARY_ID>SRS20625775</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098830/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802814" alias="LC1098832"> <IDENTIFIERS> <PRIMARY_ID>SRX23802814</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098832</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625776"> <IDENTIFIERS> <PRIMARY_ID>SRS20625776</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098832/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802815" alias="LC1098835"> <IDENTIFIERS> <PRIMARY_ID>SRX23802815</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098835</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625778"> <IDENTIFIERS> <PRIMARY_ID>SRS20625778</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098835/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802816" alias="LC1098836"> <IDENTIFIERS> <PRIMARY_ID>SRX23802816</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098836</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625780"> <IDENTIFIERS> <PRIMARY_ID>SRS20625780</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098836/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802817" alias="LC1098837"> <IDENTIFIERS> <PRIMARY_ID>SRX23802817</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098837</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625779"> <IDENTIFIERS> <PRIMARY_ID>SRS20625779</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MA-CDC-LC1098837/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802818" alias="LC1098840"> <IDENTIFIERS> <PRIMARY_ID>SRX23802818</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098840</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625781"> <IDENTIFIERS> <PRIMARY_ID>SRS20625781</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098840/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802819" alias="LC1098841"> <IDENTIFIERS> <PRIMARY_ID>SRX23802819</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098841</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625782"> <IDENTIFIERS> <PRIMARY_ID>SRS20625782</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098841/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802820" alias="LC1097892"> <IDENTIFIERS> <PRIMARY_ID>SRX23802820</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097892</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625783"> <IDENTIFIERS> <PRIMARY_ID>SRS20625783</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097892/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802821" alias="LC1097900"> <IDENTIFIERS> <PRIMARY_ID>SRX23802821</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097900</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625784"> <IDENTIFIERS> <PRIMARY_ID>SRS20625784</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1097900/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802822" alias="LC1097903"> <IDENTIFIERS> <PRIMARY_ID>SRX23802822</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097903</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625785"> <IDENTIFIERS> <PRIMARY_ID>SRS20625785</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1097903/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802823" alias="LC1097906"> <IDENTIFIERS> <PRIMARY_ID>SRX23802823</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097906</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625786"> <IDENTIFIERS> <PRIMARY_ID>SRS20625786</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097906/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802824" alias="LC1097908"> <IDENTIFIERS> <PRIMARY_ID>SRX23802824</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097908</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625787"> <IDENTIFIERS> <PRIMARY_ID>SRS20625787</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097908/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802825" alias="LC1097912"> <IDENTIFIERS> <PRIMARY_ID>SRX23802825</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097912</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625788"> <IDENTIFIERS> <PRIMARY_ID>SRS20625788</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097912/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802826" alias="LC1097915"> <IDENTIFIERS> <PRIMARY_ID>SRX23802826</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097915</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625789"> <IDENTIFIERS> <PRIMARY_ID>SRS20625789</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AL-CDC-LC1097915/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802827" alias="LC1097918"> <IDENTIFIERS> <PRIMARY_ID>SRX23802827</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097918</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625790"> <IDENTIFIERS> <PRIMARY_ID>SRS20625790</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097918/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802828" alias="LC1097919"> <IDENTIFIERS> <PRIMARY_ID>SRX23802828</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097919</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625791"> <IDENTIFIERS> <PRIMARY_ID>SRS20625791</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097919/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802829" alias="LC1097922"> <IDENTIFIERS> <PRIMARY_ID>SRX23802829</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097922</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625792"> <IDENTIFIERS> <PRIMARY_ID>SRS20625792</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1097922/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802830" alias="LC1097925"> <IDENTIFIERS> <PRIMARY_ID>SRX23802830</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097925</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625793"> <IDENTIFIERS> <PRIMARY_ID>SRS20625793</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097925/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802831" alias="LC1097926"> <IDENTIFIERS> <PRIMARY_ID>SRX23802831</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097926</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625794"> <IDENTIFIERS> <PRIMARY_ID>SRS20625794</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097926/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802832" alias="LC1097927"> <IDENTIFIERS> <PRIMARY_ID>SRX23802832</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097927</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625795"> <IDENTIFIERS> <PRIMARY_ID>SRS20625795</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097927/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802833" alias="LC1097935"> <IDENTIFIERS> <PRIMARY_ID>SRX23802833</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097935</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625796"> <IDENTIFIERS> <PRIMARY_ID>SRS20625796</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/WV-CDC-LC1097935/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802834" alias="LC1097936"> <IDENTIFIERS> <PRIMARY_ID>SRX23802834</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097936</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625797"> <IDENTIFIERS> <PRIMARY_ID>SRS20625797</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097936/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802835" alias="LC1097937"> <IDENTIFIERS> <PRIMARY_ID>SRX23802835</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097937</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625798"> <IDENTIFIERS> <PRIMARY_ID>SRS20625798</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1097937/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802836" alias="LC1097939"> <IDENTIFIERS> <PRIMARY_ID>SRX23802836</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097939</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625799"> <IDENTIFIERS> <PRIMARY_ID>SRS20625799</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097939/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802837" alias="LC1097943"> <IDENTIFIERS> <PRIMARY_ID>SRX23802837</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097943</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625800"> <IDENTIFIERS> <PRIMARY_ID>SRS20625800</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097943/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802838" alias="LC1097946"> <IDENTIFIERS> <PRIMARY_ID>SRX23802838</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097946</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625801"> <IDENTIFIERS> <PRIMARY_ID>SRS20625801</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/LA-CDC-LC1097946/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802839" alias="LC1097947"> <IDENTIFIERS> <PRIMARY_ID>SRX23802839</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097947</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625802"> <IDENTIFIERS> <PRIMARY_ID>SRS20625802</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097947/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802840" alias="LC1097952"> <IDENTIFIERS> <PRIMARY_ID>SRX23802840</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097952</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625803"> <IDENTIFIERS> <PRIMARY_ID>SRS20625803</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097952/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802841" alias="LC1097953"> <IDENTIFIERS> <PRIMARY_ID>SRX23802841</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097953</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625804"> <IDENTIFIERS> <PRIMARY_ID>SRS20625804</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MO-CDC-LC1097953/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802842" alias="LC1097957"> <IDENTIFIERS> <PRIMARY_ID>SRX23802842</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097957</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625805"> <IDENTIFIERS> <PRIMARY_ID>SRS20625805</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097957/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802843" alias="LC1097959"> <IDENTIFIERS> <PRIMARY_ID>SRX23802843</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097959</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625807"> <IDENTIFIERS> <PRIMARY_ID>SRS20625807</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1097959/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802844" alias="LC1097960"> <IDENTIFIERS> <PRIMARY_ID>SRX23802844</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097960</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625806"> <IDENTIFIERS> <PRIMARY_ID>SRS20625806</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097960/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802845" alias="LC1097961"> <IDENTIFIERS> <PRIMARY_ID>SRX23802845</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097961</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625808"> <IDENTIFIERS> <PRIMARY_ID>SRS20625808</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097961/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802846" alias="LC1097984"> <IDENTIFIERS> <PRIMARY_ID>SRX23802846</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097984</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625809"> <IDENTIFIERS> <PRIMARY_ID>SRS20625809</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1097984/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802847" alias="LC1097987"> <IDENTIFIERS> <PRIMARY_ID>SRX23802847</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097987</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625810"> <IDENTIFIERS> <PRIMARY_ID>SRS20625810</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097987/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802848" alias="LC1098005"> <IDENTIFIERS> <PRIMARY_ID>SRX23802848</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098005</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625811"> <IDENTIFIERS> <PRIMARY_ID>SRS20625811</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1098005/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802849" alias="LC1098006"> <IDENTIFIERS> <PRIMARY_ID>SRX23802849</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098006</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625812"> <IDENTIFIERS> <PRIMARY_ID>SRS20625812</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1098006/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802850" alias="LC1098007"> <IDENTIFIERS> <PRIMARY_ID>SRX23802850</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098007</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625813"> <IDENTIFIERS> <PRIMARY_ID>SRS20625813</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1098007/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802851" alias="LC1098024"> <IDENTIFIERS> <PRIMARY_ID>SRX23802851</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098024</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625814"> <IDENTIFIERS> <PRIMARY_ID>SRS20625814</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1098024/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802852" alias="LC1098434"> <IDENTIFIERS> <PRIMARY_ID>SRX23802852</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098434</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625815"> <IDENTIFIERS> <PRIMARY_ID>SRS20625815</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098434/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802853" alias="LC1098439"> <IDENTIFIERS> <PRIMARY_ID>SRX23802853</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098439</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625816"> <IDENTIFIERS> <PRIMARY_ID>SRS20625816</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098439/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802854" alias="LC1098440"> <IDENTIFIERS> <PRIMARY_ID>SRX23802854</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098440</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625817"> <IDENTIFIERS> <PRIMARY_ID>SRS20625817</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098440/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802855" alias="LC1098441"> <IDENTIFIERS> <PRIMARY_ID>SRX23802855</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098441</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625818"> <IDENTIFIERS> <PRIMARY_ID>SRS20625818</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098441/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802856" alias="LC1098442"> <IDENTIFIERS> <PRIMARY_ID>SRX23802856</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098442</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625819"> <IDENTIFIERS> <PRIMARY_ID>SRS20625819</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098442/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802857" alias="LC1098444"> <IDENTIFIERS> <PRIMARY_ID>SRX23802857</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098444</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625820"> <IDENTIFIERS> <PRIMARY_ID>SRS20625820</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098444/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802858" alias="LC1098447"> <IDENTIFIERS> <PRIMARY_ID>SRX23802858</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098447</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625821"> <IDENTIFIERS> <PRIMARY_ID>SRS20625821</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098447/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802859" alias="LC1098448"> <IDENTIFIERS> <PRIMARY_ID>SRX23802859</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098448</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625822"> <IDENTIFIERS> <PRIMARY_ID>SRS20625822</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098448/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802860" alias="LC1098450"> <IDENTIFIERS> <PRIMARY_ID>SRX23802860</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098450</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625823"> <IDENTIFIERS> <PRIMARY_ID>SRS20625823</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098450/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802861" alias="LC1098453"> <IDENTIFIERS> <PRIMARY_ID>SRX23802861</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098453</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625824"> <IDENTIFIERS> <PRIMARY_ID>SRS20625824</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098453/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802862" alias="LC1098455"> <IDENTIFIERS> <PRIMARY_ID>SRX23802862</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098455</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625825"> <IDENTIFIERS> <PRIMARY_ID>SRS20625825</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098455/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802863" alias="LC1098457"> <IDENTIFIERS> <PRIMARY_ID>SRX23802863</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098457</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625826"> <IDENTIFIERS> <PRIMARY_ID>SRS20625826</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098457/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802864" alias="LC1098459"> <IDENTIFIERS> <PRIMARY_ID>SRX23802864</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098459</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625827"> <IDENTIFIERS> <PRIMARY_ID>SRS20625827</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098459/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802865" alias="LC1098460"> <IDENTIFIERS> <PRIMARY_ID>SRX23802865</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098460</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625828"> <IDENTIFIERS> <PRIMARY_ID>SRS20625828</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098460/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802866" alias="LC1098461"> <IDENTIFIERS> <PRIMARY_ID>SRX23802866</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098461</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625829"> <IDENTIFIERS> <PRIMARY_ID>SRS20625829</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098461/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802867" alias="LC1098463"> <IDENTIFIERS> <PRIMARY_ID>SRX23802867</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098463</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625830"> <IDENTIFIERS> <PRIMARY_ID>SRS20625830</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098463/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802868" alias="LC1098464"> <IDENTIFIERS> <PRIMARY_ID>SRX23802868</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098464</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625831"> <IDENTIFIERS> <PRIMARY_ID>SRS20625831</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098464/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802869" alias="LC1098465"> <IDENTIFIERS> <PRIMARY_ID>SRX23802869</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098465</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625832"> <IDENTIFIERS> <PRIMARY_ID>SRS20625832</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CT-CDC-LC1098465/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802870" alias="LC1098467"> <IDENTIFIERS> <PRIMARY_ID>SRX23802870</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098467</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625833"> <IDENTIFIERS> <PRIMARY_ID>SRS20625833</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098467/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802871" alias="LC1098468"> <IDENTIFIERS> <PRIMARY_ID>SRX23802871</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098468</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625834"> <IDENTIFIERS> <PRIMARY_ID>SRS20625834</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098468/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802872" alias="LC1098471"> <IDENTIFIERS> <PRIMARY_ID>SRX23802872</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098471</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625836"> <IDENTIFIERS> <PRIMARY_ID>SRS20625836</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098471/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802873" alias="LC1098473"> <IDENTIFIERS> <PRIMARY_ID>SRX23802873</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098473</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625835"> <IDENTIFIERS> <PRIMARY_ID>SRS20625835</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098473/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802874" alias="LC1098474"> <IDENTIFIERS> <PRIMARY_ID>SRX23802874</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098474</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625837"> <IDENTIFIERS> <PRIMARY_ID>SRS20625837</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098474/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802875" alias="LC1098477"> <IDENTIFIERS> <PRIMARY_ID>SRX23802875</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098477</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625838"> <IDENTIFIERS> <PRIMARY_ID>SRS20625838</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098477/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802876" alias="LC1098480"> <IDENTIFIERS> <PRIMARY_ID>SRX23802876</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098480</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625839"> <IDENTIFIERS> <PRIMARY_ID>SRS20625839</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1098480/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802877" alias="LC1098483"> <IDENTIFIERS> <PRIMARY_ID>SRX23802877</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098483</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625840"> <IDENTIFIERS> <PRIMARY_ID>SRS20625840</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1098483/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802878" alias="LC1098497"> <IDENTIFIERS> <PRIMARY_ID>SRX23802878</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098497</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625841"> <IDENTIFIERS> <PRIMARY_ID>SRS20625841</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098497/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802879" alias="LC1098500"> <IDENTIFIERS> <PRIMARY_ID>SRX23802879</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098500</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625842"> <IDENTIFIERS> <PRIMARY_ID>SRS20625842</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098500/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802880" alias="LC1098512"> <IDENTIFIERS> <PRIMARY_ID>SRX23802880</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098512</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625843"> <IDENTIFIERS> <PRIMARY_ID>SRS20625843</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098512/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802881" alias="LC1098516"> <IDENTIFIERS> <PRIMARY_ID>SRX23802881</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098516</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625844"> <IDENTIFIERS> <PRIMARY_ID>SRS20625844</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098516/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802882" alias="LC1098520"> <IDENTIFIERS> <PRIMARY_ID>SRX23802882</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098520</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625845"> <IDENTIFIERS> <PRIMARY_ID>SRS20625845</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098520/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802883" alias="LC1098521"> <IDENTIFIERS> <PRIMARY_ID>SRX23802883</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098521</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625846"> <IDENTIFIERS> <PRIMARY_ID>SRS20625846</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098521/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802884" alias="LC1098842"> <IDENTIFIERS> <PRIMARY_ID>SRX23802884</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098842</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625847"> <IDENTIFIERS> <PRIMARY_ID>SRS20625847</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098842/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802885" alias="LC1098846"> <IDENTIFIERS> <PRIMARY_ID>SRX23802885</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098846</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625848"> <IDENTIFIERS> <PRIMARY_ID>SRS20625848</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098846/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802886" alias="LC1098848"> <IDENTIFIERS> <PRIMARY_ID>SRX23802886</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098848</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625849"> <IDENTIFIERS> <PRIMARY_ID>SRS20625849</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098848/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802887" alias="LC1098852"> <IDENTIFIERS> <PRIMARY_ID>SRX23802887</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098852</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625850"> <IDENTIFIERS> <PRIMARY_ID>SRS20625850</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098852/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802888" alias="LC1098853"> <IDENTIFIERS> <PRIMARY_ID>SRX23802888</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098853</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625852"> <IDENTIFIERS> <PRIMARY_ID>SRS20625852</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098853/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802889" alias="LC1098854"> <IDENTIFIERS> <PRIMARY_ID>SRX23802889</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098854</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625851"> <IDENTIFIERS> <PRIMARY_ID>SRS20625851</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098854/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802890" alias="LC1098855"> <IDENTIFIERS> <PRIMARY_ID>SRX23802890</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098855</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625853"> <IDENTIFIERS> <PRIMARY_ID>SRS20625853</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098855/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802891" alias="LC1098856"> <IDENTIFIERS> <PRIMARY_ID>SRX23802891</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098856</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625855"> <IDENTIFIERS> <PRIMARY_ID>SRS20625855</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098856/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802892" alias="LC1098858"> <IDENTIFIERS> <PRIMARY_ID>SRX23802892</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098858</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625854"> <IDENTIFIERS> <PRIMARY_ID>SRS20625854</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098858/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802893" alias="LC1098860"> <IDENTIFIERS> <PRIMARY_ID>SRX23802893</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098860</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625856"> <IDENTIFIERS> <PRIMARY_ID>SRS20625856</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098860/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802894" alias="LC1098861"> <IDENTIFIERS> <PRIMARY_ID>SRX23802894</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098861</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625857"> <IDENTIFIERS> <PRIMARY_ID>SRS20625857</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098861/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802895" alias="LC1098862"> <IDENTIFIERS> <PRIMARY_ID>SRX23802895</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098862</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625859"> <IDENTIFIERS> <PRIMARY_ID>SRS20625859</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098862/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802896" alias="LC1098863"> <IDENTIFIERS> <PRIMARY_ID>SRX23802896</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098863</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625858"> <IDENTIFIERS> <PRIMARY_ID>SRS20625858</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098863/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802897" alias="LC1098864"> <IDENTIFIERS> <PRIMARY_ID>SRX23802897</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098864</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625861"> <IDENTIFIERS> <PRIMARY_ID>SRS20625861</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098864/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802898" alias="LC1098865"> <IDENTIFIERS> <PRIMARY_ID>SRX23802898</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098865</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625860"> <IDENTIFIERS> <PRIMARY_ID>SRS20625860</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098865/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802899" alias="LC1098870"> <IDENTIFIERS> <PRIMARY_ID>SRX23802899</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098870</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625862"> <IDENTIFIERS> <PRIMARY_ID>SRS20625862</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098870/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802900" alias="LC1098873"> <IDENTIFIERS> <PRIMARY_ID>SRX23802900</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098873</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625863"> <IDENTIFIERS> <PRIMARY_ID>SRS20625863</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098873/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802901" alias="LC1098877"> <IDENTIFIERS> <PRIMARY_ID>SRX23802901</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098877</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625864"> <IDENTIFIERS> <PRIMARY_ID>SRS20625864</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098877/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802902" alias="LC1098890"> <IDENTIFIERS> <PRIMARY_ID>SRX23802902</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098890</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625865"> <IDENTIFIERS> <PRIMARY_ID>SRS20625865</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098890/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802903" alias="LC1098894"> <IDENTIFIERS> <PRIMARY_ID>SRX23802903</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098894</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625866"> <IDENTIFIERS> <PRIMARY_ID>SRS20625866</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098894/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802904" alias="LC1098902"> <IDENTIFIERS> <PRIMARY_ID>SRX23802904</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098902</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625867"> <IDENTIFIERS> <PRIMARY_ID>SRS20625867</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098902/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802905" alias="LC1098905"> <IDENTIFIERS> <PRIMARY_ID>SRX23802905</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098905</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625868"> <IDENTIFIERS> <PRIMARY_ID>SRS20625868</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098905/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802906" alias="LC1098906"> <IDENTIFIERS> <PRIMARY_ID>SRX23802906</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098906</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625869"> <IDENTIFIERS> <PRIMARY_ID>SRS20625869</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098906/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802907" alias="LC1098908"> <IDENTIFIERS> <PRIMARY_ID>SRX23802907</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098908</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625871"> <IDENTIFIERS> <PRIMARY_ID>SRS20625871</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098908/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802908" alias="LC1098912"> <IDENTIFIERS> <PRIMARY_ID>SRX23802908</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098912</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625870"> <IDENTIFIERS> <PRIMARY_ID>SRS20625870</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098912/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802909" alias="LC1098916"> <IDENTIFIERS> <PRIMARY_ID>SRX23802909</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098916</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625872"> <IDENTIFIERS> <PRIMARY_ID>SRS20625872</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098916/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802910" alias="LC1098917"> <IDENTIFIERS> <PRIMARY_ID>SRX23802910</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098917</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625873"> <IDENTIFIERS> <PRIMARY_ID>SRS20625873</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098917/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802911" alias="LC1098918"> <IDENTIFIERS> <PRIMARY_ID>SRX23802911</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098918</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625874"> <IDENTIFIERS> <PRIMARY_ID>SRS20625874</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098918/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802912" alias="LC1098920"> <IDENTIFIERS> <PRIMARY_ID>SRX23802912</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098920</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625875"> <IDENTIFIERS> <PRIMARY_ID>SRS20625875</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098920/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802913" alias="LC1098921"> <IDENTIFIERS> <PRIMARY_ID>SRX23802913</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098921</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625876"> <IDENTIFIERS> <PRIMARY_ID>SRS20625876</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098921/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802914" alias="LC1098922"> <IDENTIFIERS> <PRIMARY_ID>SRX23802914</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098922</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625877"> <IDENTIFIERS> <PRIMARY_ID>SRS20625877</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098922/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802915" alias="LC1098925"> <IDENTIFIERS> <PRIMARY_ID>SRX23802915</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098925</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625878"> <IDENTIFIERS> <PRIMARY_ID>SRS20625878</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098925/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802916" alias="LC1097465"> <IDENTIFIERS> <PRIMARY_ID>SRX23802916</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097465</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625879"> <IDENTIFIERS> <PRIMARY_ID>SRS20625879</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/ND-CDC-LC1097465/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802917" alias="LC1097514"> <IDENTIFIERS> <PRIMARY_ID>SRX23802917</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097514</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625880"> <IDENTIFIERS> <PRIMARY_ID>SRS20625880</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-LC1097514/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802918" alias="LC1097518"> <IDENTIFIERS> <PRIMARY_ID>SRX23802918</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097518</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625881"> <IDENTIFIERS> <PRIMARY_ID>SRS20625881</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-LC1097518/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802919" alias="LC1097526"> <IDENTIFIERS> <PRIMARY_ID>SRX23802919</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097526</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625884"> <IDENTIFIERS> <PRIMARY_ID>SRS20625884</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097526/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802920" alias="LC1098143"> <IDENTIFIERS> <PRIMARY_ID>SRX23802920</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098143</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625883"> <IDENTIFIERS> <PRIMARY_ID>SRS20625883</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MA-CDC-LC1098143/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802921" alias="LC1098144"> <IDENTIFIERS> <PRIMARY_ID>SRX23802921</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098144</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625882"> <IDENTIFIERS> <PRIMARY_ID>SRS20625882</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098144/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802922" alias="LC1098145"> <IDENTIFIERS> <PRIMARY_ID>SRX23802922</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098145</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625886"> <IDENTIFIERS> <PRIMARY_ID>SRS20625886</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098145/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802923" alias="LC1098147"> <IDENTIFIERS> <PRIMARY_ID>SRX23802923</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098147</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625885"> <IDENTIFIERS> <PRIMARY_ID>SRS20625885</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098147/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802924" alias="LC1098150"> <IDENTIFIERS> <PRIMARY_ID>SRX23802924</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098150</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625887"> <IDENTIFIERS> <PRIMARY_ID>SRS20625887</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098150/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802925" alias="LC1098154"> <IDENTIFIERS> <PRIMARY_ID>SRX23802925</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098154</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625888"> <IDENTIFIERS> <PRIMARY_ID>SRS20625888</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098154/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802926" alias="LC1098155"> <IDENTIFIERS> <PRIMARY_ID>SRX23802926</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098155</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625889"> <IDENTIFIERS> <PRIMARY_ID>SRS20625889</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098155/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802927" alias="LC1098158"> <IDENTIFIERS> <PRIMARY_ID>SRX23802927</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098158</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625890"> <IDENTIFIERS> <PRIMARY_ID>SRS20625890</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098158/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802928" alias="LC1098159"> <IDENTIFIERS> <PRIMARY_ID>SRX23802928</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098159</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625891"> <IDENTIFIERS> <PRIMARY_ID>SRS20625891</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098159/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802929" alias="LC1098160"> <IDENTIFIERS> <PRIMARY_ID>SRX23802929</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098160</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625892"> <IDENTIFIERS> <PRIMARY_ID>SRS20625892</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098160/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802930" alias="LC1098162"> <IDENTIFIERS> <PRIMARY_ID>SRX23802930</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098162</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625893"> <IDENTIFIERS> <PRIMARY_ID>SRS20625893</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098162/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802931" alias="LC1098163"> <IDENTIFIERS> <PRIMARY_ID>SRX23802931</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098163</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625894"> <IDENTIFIERS> <PRIMARY_ID>SRS20625894</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098163/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802932" alias="LC1098169"> <IDENTIFIERS> <PRIMARY_ID>SRX23802932</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098169</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625896"> <IDENTIFIERS> <PRIMARY_ID>SRS20625896</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098169/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802933" alias="LC1098170"> <IDENTIFIERS> <PRIMARY_ID>SRX23802933</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098170</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625895"> <IDENTIFIERS> <PRIMARY_ID>SRS20625895</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098170/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802934" alias="LC1098172"> <IDENTIFIERS> <PRIMARY_ID>SRX23802934</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098172</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625897"> <IDENTIFIERS> <PRIMARY_ID>SRS20625897</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098172/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802935" alias="LC1098173"> <IDENTIFIERS> <PRIMARY_ID>SRX23802935</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098173</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625898"> <IDENTIFIERS> <PRIMARY_ID>SRS20625898</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098173/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802936" alias="LC1098174"> <IDENTIFIERS> <PRIMARY_ID>SRX23802936</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098174</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625900"> <IDENTIFIERS> <PRIMARY_ID>SRS20625900</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098174/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802937" alias="LC1098179"> <IDENTIFIERS> <PRIMARY_ID>SRX23802937</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098179</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625899"> <IDENTIFIERS> <PRIMARY_ID>SRS20625899</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098179/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802938" alias="LC1098184"> <IDENTIFIERS> <PRIMARY_ID>SRX23802938</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098184</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625901"> <IDENTIFIERS> <PRIMARY_ID>SRS20625901</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098184/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802939" alias="LC1098186"> <IDENTIFIERS> <PRIMARY_ID>SRX23802939</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098186</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625902"> <IDENTIFIERS> <PRIMARY_ID>SRS20625902</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098186/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802940" alias="LC1098189"> <IDENTIFIERS> <PRIMARY_ID>SRX23802940</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098189</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625903"> <IDENTIFIERS> <PRIMARY_ID>SRS20625903</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098189/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802941" alias="LC1098191"> <IDENTIFIERS> <PRIMARY_ID>SRX23802941</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098191</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625904"> <IDENTIFIERS> <PRIMARY_ID>SRS20625904</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098191/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802942" alias="LC1098192"> <IDENTIFIERS> <PRIMARY_ID>SRX23802942</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098192</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625905"> <IDENTIFIERS> <PRIMARY_ID>SRS20625905</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098192/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802943" alias="LC1098193"> <IDENTIFIERS> <PRIMARY_ID>SRX23802943</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098193</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625906"> <IDENTIFIERS> <PRIMARY_ID>SRS20625906</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098193/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802944" alias="LC1098198"> <IDENTIFIERS> <PRIMARY_ID>SRX23802944</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098198</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625907"> <IDENTIFIERS> <PRIMARY_ID>SRS20625907</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098198/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802945" alias="LC1098199"> <IDENTIFIERS> <PRIMARY_ID>SRX23802945</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098199</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625908"> <IDENTIFIERS> <PRIMARY_ID>SRS20625908</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098199/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802946" alias="LC1098200"> <IDENTIFIERS> <PRIMARY_ID>SRX23802946</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098200</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625909"> <IDENTIFIERS> <PRIMARY_ID>SRS20625909</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098200/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802947" alias="LC1098201"> <IDENTIFIERS> <PRIMARY_ID>SRX23802947</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098201</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625910"> <IDENTIFIERS> <PRIMARY_ID>SRS20625910</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098201/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802948" alias="LC1098202"> <IDENTIFIERS> <PRIMARY_ID>SRX23802948</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098202</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625911"> <IDENTIFIERS> <PRIMARY_ID>SRS20625911</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098202/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802949" alias="LC1098203"> <IDENTIFIERS> <PRIMARY_ID>SRX23802949</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098203</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625912"> <IDENTIFIERS> <PRIMARY_ID>SRS20625912</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098203/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802950" alias="LC1098204"> <IDENTIFIERS> <PRIMARY_ID>SRX23802950</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098204</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625913"> <IDENTIFIERS> <PRIMARY_ID>SRS20625913</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098204/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802951" alias="LC1098205"> <IDENTIFIERS> <PRIMARY_ID>SRX23802951</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098205</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625915"> <IDENTIFIERS> <PRIMARY_ID>SRS20625915</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098205/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802952" alias="LC1098524"> <IDENTIFIERS> <PRIMARY_ID>SRX23802952</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098524</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625914"> <IDENTIFIERS> <PRIMARY_ID>SRS20625914</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098524/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802953" alias="LC1098526"> <IDENTIFIERS> <PRIMARY_ID>SRX23802953</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098526</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625916"> <IDENTIFIERS> <PRIMARY_ID>SRS20625916</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098526/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802954" alias="LC1098529"> <IDENTIFIERS> <PRIMARY_ID>SRX23802954</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098529</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625917"> <IDENTIFIERS> <PRIMARY_ID>SRS20625917</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098529/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802955" alias="LC1098531"> <IDENTIFIERS> <PRIMARY_ID>SRX23802955</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098531</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625918"> <IDENTIFIERS> <PRIMARY_ID>SRS20625918</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098531/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802956" alias="LC1098532"> <IDENTIFIERS> <PRIMARY_ID>SRX23802956</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098532</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625919"> <IDENTIFIERS> <PRIMARY_ID>SRS20625919</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098532/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802957" alias="LC1098582"> <IDENTIFIERS> <PRIMARY_ID>SRX23802957</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098582</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625920"> <IDENTIFIERS> <PRIMARY_ID>SRS20625920</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098582/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802958" alias="LC1098583"> <IDENTIFIERS> <PRIMARY_ID>SRX23802958</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098583</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625921"> <IDENTIFIERS> <PRIMARY_ID>SRS20625921</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098583/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802959" alias="LC1098591"> <IDENTIFIERS> <PRIMARY_ID>SRX23802959</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098591</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625922"> <IDENTIFIERS> <PRIMARY_ID>SRS20625922</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098591/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802960" alias="LC1098592"> <IDENTIFIERS> <PRIMARY_ID>SRX23802960</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098592</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625923"> <IDENTIFIERS> <PRIMARY_ID>SRS20625923</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098592/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802961" alias="LC1098593"> <IDENTIFIERS> <PRIMARY_ID>SRX23802961</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098593</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625924"> <IDENTIFIERS> <PRIMARY_ID>SRS20625924</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098593/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802962" alias="LC1098595"> <IDENTIFIERS> <PRIMARY_ID>SRX23802962</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098595</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625925"> <IDENTIFIERS> <PRIMARY_ID>SRS20625925</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098595/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802963" alias="LC1098596"> <IDENTIFIERS> <PRIMARY_ID>SRX23802963</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098596</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625926"> <IDENTIFIERS> <PRIMARY_ID>SRS20625926</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098596/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802964" alias="LC1098598"> <IDENTIFIERS> <PRIMARY_ID>SRX23802964</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098598</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625927"> <IDENTIFIERS> <PRIMARY_ID>SRS20625927</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098598/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802965" alias="LC1098602"> <IDENTIFIERS> <PRIMARY_ID>SRX23802965</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098602</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625928"> <IDENTIFIERS> <PRIMARY_ID>SRS20625928</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098602/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802966" alias="LC1098603"> <IDENTIFIERS> <PRIMARY_ID>SRX23802966</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098603</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625929"> <IDENTIFIERS> <PRIMARY_ID>SRS20625929</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098603/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802967" alias="LC1098604"> <IDENTIFIERS> <PRIMARY_ID>SRX23802967</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098604</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625930"> <IDENTIFIERS> <PRIMARY_ID>SRS20625930</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098604/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802968" alias="LC1098606"> <IDENTIFIERS> <PRIMARY_ID>SRX23802968</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098606</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625931"> <IDENTIFIERS> <PRIMARY_ID>SRS20625931</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098606/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802969" alias="LC1098610"> <IDENTIFIERS> <PRIMARY_ID>SRX23802969</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098610</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625932"> <IDENTIFIERS> <PRIMARY_ID>SRS20625932</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098610/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802970" alias="LC1098612"> <IDENTIFIERS> <PRIMARY_ID>SRX23802970</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098612</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625934"> <IDENTIFIERS> <PRIMARY_ID>SRS20625934</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098612/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802971" alias="LC1098616"> <IDENTIFIERS> <PRIMARY_ID>SRX23802971</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098616</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625935"> <IDENTIFIERS> <PRIMARY_ID>SRS20625935</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098616/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802972" alias="LC1098617"> <IDENTIFIERS> <PRIMARY_ID>SRX23802972</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098617</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625933"> <IDENTIFIERS> <PRIMARY_ID>SRS20625933</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098617/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802973" alias="LC1098618"> <IDENTIFIERS> <PRIMARY_ID>SRX23802973</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098618</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625937"> <IDENTIFIERS> <PRIMARY_ID>SRS20625937</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098618/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802974" alias="LC1098620"> <IDENTIFIERS> <PRIMARY_ID>SRX23802974</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098620</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625936"> <IDENTIFIERS> <PRIMARY_ID>SRS20625936</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098620/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802975" alias="LC1098624"> <IDENTIFIERS> <PRIMARY_ID>SRX23802975</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098624</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625938"> <IDENTIFIERS> <PRIMARY_ID>SRS20625938</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098624/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802976" alias="LC1098625"> <IDENTIFIERS> <PRIMARY_ID>SRX23802976</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098625</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625939"> <IDENTIFIERS> <PRIMARY_ID>SRS20625939</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098625/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802977" alias="LC1098626"> <IDENTIFIERS> <PRIMARY_ID>SRX23802977</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098626</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625940"> <IDENTIFIERS> <PRIMARY_ID>SRS20625940</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098626/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802978" alias="LC1098629"> <IDENTIFIERS> <PRIMARY_ID>SRX23802978</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098629</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625941"> <IDENTIFIERS> <PRIMARY_ID>SRS20625941</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098629/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802979" alias="LC1098634"> <IDENTIFIERS> <PRIMARY_ID>SRX23802979</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098634</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625942"> <IDENTIFIERS> <PRIMARY_ID>SRS20625942</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098634/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802980" alias="LC1098641"> <IDENTIFIERS> <PRIMARY_ID>SRX23802980</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098641</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625944"> <IDENTIFIERS> <PRIMARY_ID>SRS20625944</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098641/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802981" alias="LC1098650"> <IDENTIFIERS> <PRIMARY_ID>SRX23802981</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098650</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625943"> <IDENTIFIERS> <PRIMARY_ID>SRS20625943</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098650/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802982" alias="LC1098655"> <IDENTIFIERS> <PRIMARY_ID>SRX23802982</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098655</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625946"> <IDENTIFIERS> <PRIMARY_ID>SRS20625946</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098655/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802983" alias="LC1098656"> <IDENTIFIERS> <PRIMARY_ID>SRX23802983</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098656</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625945"> <IDENTIFIERS> <PRIMARY_ID>SRS20625945</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098656/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802984" alias="LC1098930"> <IDENTIFIERS> <PRIMARY_ID>SRX23802984</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098930</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625947"> <IDENTIFIERS> <PRIMARY_ID>SRS20625947</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098930/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802985" alias="LC1098935"> <IDENTIFIERS> <PRIMARY_ID>SRX23802985</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098935</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625948"> <IDENTIFIERS> <PRIMARY_ID>SRS20625948</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098935/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802986" alias="LC1098937"> <IDENTIFIERS> <PRIMARY_ID>SRX23802986</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098937</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625949"> <IDENTIFIERS> <PRIMARY_ID>SRS20625949</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098937/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802987" alias="LC1098938"> <IDENTIFIERS> <PRIMARY_ID>SRX23802987</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098938</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625950"> <IDENTIFIERS> <PRIMARY_ID>SRS20625950</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098938/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802988" alias="LC1098941"> <IDENTIFIERS> <PRIMARY_ID>SRX23802988</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098941</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625951"> <IDENTIFIERS> <PRIMARY_ID>SRS20625951</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098941/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802989" alias="LC1098944"> <IDENTIFIERS> <PRIMARY_ID>SRX23802989</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098944</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625952"> <IDENTIFIERS> <PRIMARY_ID>SRS20625952</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098944/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802990" alias="LC1098947"> <IDENTIFIERS> <PRIMARY_ID>SRX23802990</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098947</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625955"> <IDENTIFIERS> <PRIMARY_ID>SRS20625955</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098947/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802991" alias="LC1098948"> <IDENTIFIERS> <PRIMARY_ID>SRX23802991</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098948</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625953"> <IDENTIFIERS> <PRIMARY_ID>SRS20625953</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098948/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802992" alias="LC1098950"> <IDENTIFIERS> <PRIMARY_ID>SRX23802992</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098950</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625954"> <IDENTIFIERS> <PRIMARY_ID>SRS20625954</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098950/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802993" alias="LC1098952"> <IDENTIFIERS> <PRIMARY_ID>SRX23802993</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098952</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625956"> <IDENTIFIERS> <PRIMARY_ID>SRS20625956</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098952/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802994" alias="LC1098956"> <IDENTIFIERS> <PRIMARY_ID>SRX23802994</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098956</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625957"> <IDENTIFIERS> <PRIMARY_ID>SRS20625957</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098956/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802995" alias="LC1098957"> <IDENTIFIERS> <PRIMARY_ID>SRX23802995</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098957</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625958"> <IDENTIFIERS> <PRIMARY_ID>SRS20625958</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098957/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802996" alias="LC1098958"> <IDENTIFIERS> <PRIMARY_ID>SRX23802996</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098958</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625959"> <IDENTIFIERS> <PRIMARY_ID>SRS20625959</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098958/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802997" alias="LC1098959"> <IDENTIFIERS> <PRIMARY_ID>SRX23802997</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098959</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625960"> <IDENTIFIERS> <PRIMARY_ID>SRS20625960</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098959/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802998" alias="LC1098966"> <IDENTIFIERS> <PRIMARY_ID>SRX23802998</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098966</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625961"> <IDENTIFIERS> <PRIMARY_ID>SRS20625961</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098966/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802999" alias="LC1098967"> <IDENTIFIERS> <PRIMARY_ID>SRX23802999</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098967</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625962"> <IDENTIFIERS> <PRIMARY_ID>SRS20625962</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098967/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803000" alias="LC1098969"> <IDENTIFIERS> <PRIMARY_ID>SRX23803000</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098969</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625963"> <IDENTIFIERS> <PRIMARY_ID>SRS20625963</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098969/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803001" alias="LC1098970"> <IDENTIFIERS> <PRIMARY_ID>SRX23803001</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098970</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625964"> <IDENTIFIERS> <PRIMARY_ID>SRS20625964</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098970/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803002" alias="LC1098977"> <IDENTIFIERS> <PRIMARY_ID>SRX23803002</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098977</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625965"> <IDENTIFIERS> <PRIMARY_ID>SRS20625965</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098977/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803003" alias="LC1098980"> <IDENTIFIERS> <PRIMARY_ID>SRX23803003</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098980</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625966"> <IDENTIFIERS> <PRIMARY_ID>SRS20625966</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098980/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803004" alias="LC1098987"> <IDENTIFIERS> <PRIMARY_ID>SRX23803004</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098987</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625967"> <IDENTIFIERS> <PRIMARY_ID>SRS20625967</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098987/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803005" alias="LC1098990"> <IDENTIFIERS> <PRIMARY_ID>SRX23803005</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098990</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625968"> <IDENTIFIERS> <PRIMARY_ID>SRS20625968</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098990/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803006" alias="LC1098991"> <IDENTIFIERS> <PRIMARY_ID>SRX23803006</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098991</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625969"> <IDENTIFIERS> <PRIMARY_ID>SRS20625969</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098991/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803007" alias="LC1098992"> <IDENTIFIERS> <PRIMARY_ID>SRX23803007</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098992</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625970"> <IDENTIFIERS> <PRIMARY_ID>SRS20625970</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098992/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803008" alias="LC1098993"> <IDENTIFIERS> <PRIMARY_ID>SRX23803008</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098993</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625971"> <IDENTIFIERS> <PRIMARY_ID>SRS20625971</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098993/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803009" alias="LC1098995"> <IDENTIFIERS> <PRIMARY_ID>SRX23803009</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098995</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625972"> <IDENTIFIERS> <PRIMARY_ID>SRS20625972</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098995/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803010" alias="LC1098996"> <IDENTIFIERS> <PRIMARY_ID>SRX23803010</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098996</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625973"> <IDENTIFIERS> <PRIMARY_ID>SRS20625973</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098996/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803011" alias="LC1098997"> <IDENTIFIERS> <PRIMARY_ID>SRX23803011</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098997</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625974"> <IDENTIFIERS> <PRIMARY_ID>SRS20625974</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098997/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803012" alias="LC1098999"> <IDENTIFIERS> <PRIMARY_ID>SRX23803012</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098999</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625975"> <IDENTIFIERS> <PRIMARY_ID>SRS20625975</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AZ-CDC-LC1098999/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803013" alias="LC1099001"> <IDENTIFIERS> <PRIMARY_ID>SRX23803013</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099001</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625976"> <IDENTIFIERS> <PRIMARY_ID>SRS20625976</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1099001/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803014" alias="LC1099005"> <IDENTIFIERS> <PRIMARY_ID>SRX23803014</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099005</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625977"> <IDENTIFIERS> <PRIMARY_ID>SRS20625977</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1099005/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803015" alias="LC1099006"> <IDENTIFIERS> <PRIMARY_ID>SRX23803015</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099006</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625980"> <IDENTIFIERS> <PRIMARY_ID>SRS20625980</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1099006/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803016" alias="LC1097527"> <IDENTIFIERS> <PRIMARY_ID>SRX23803016</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097527</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625978"> <IDENTIFIERS> <PRIMARY_ID>SRS20625978</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-LC1097527/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803017" alias="LC1097546"> <IDENTIFIERS> <PRIMARY_ID>SRX23803017</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097546</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625979"> <IDENTIFIERS> <PRIMARY_ID>SRS20625979</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097546/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803018" alias="LC1097548"> <IDENTIFIERS> <PRIMARY_ID>SRX23803018</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097548</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625981"> <IDENTIFIERS> <PRIMARY_ID>SRS20625981</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097548/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803019" alias="LC1097549"> <IDENTIFIERS> <PRIMARY_ID>SRX23803019</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097549</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625982"> <IDENTIFIERS> <PRIMARY_ID>SRS20625982</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-LC1097549/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803020" alias="LC1097551"> <IDENTIFIERS> <PRIMARY_ID>SRX23803020</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097551</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625983"> <IDENTIFIERS> <PRIMARY_ID>SRS20625983</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097551/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803021" alias="LC1097555"> <IDENTIFIERS> <PRIMARY_ID>SRX23803021</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097555</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625985"> <IDENTIFIERS> <PRIMARY_ID>SRS20625985</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097555/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803022" alias="LC1097565"> <IDENTIFIERS> <PRIMARY_ID>SRX23803022</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097565</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625984"> <IDENTIFIERS> <PRIMARY_ID>SRS20625984</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097565/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803023" alias="LC1097571"> <IDENTIFIERS> <PRIMARY_ID>SRX23803023</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097571</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625986"> <IDENTIFIERS> <PRIMARY_ID>SRS20625986</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097571/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803024" alias="LC1097572"> <IDENTIFIERS> <PRIMARY_ID>SRX23803024</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097572</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625987"> <IDENTIFIERS> <PRIMARY_ID>SRS20625987</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097572/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803025" alias="LC1097573"> <IDENTIFIERS> <PRIMARY_ID>SRX23803025</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097573</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625988"> <IDENTIFIERS> <PRIMARY_ID>SRS20625988</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1097573/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803026" alias="LC1097574"> <IDENTIFIERS> <PRIMARY_ID>SRX23803026</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097574</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625989"> <IDENTIFIERS> <PRIMARY_ID>SRS20625989</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097574/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803027" alias="LC1097576"> <IDENTIFIERS> <PRIMARY_ID>SRX23803027</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097576</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625990"> <IDENTIFIERS> <PRIMARY_ID>SRS20625990</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097576/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803028" alias="LC1097587"> <IDENTIFIERS> <PRIMARY_ID>SRX23803028</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097587</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625991"> <IDENTIFIERS> <PRIMARY_ID>SRS20625991</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1097587/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803029" alias="LC1097589"> <IDENTIFIERS> <PRIMARY_ID>SRX23803029</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097589</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625992"> <IDENTIFIERS> <PRIMARY_ID>SRS20625992</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AZ-CDC-LC1097589/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803030" alias="LC1097590"> <IDENTIFIERS> <PRIMARY_ID>SRX23803030</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097590</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625993"> <IDENTIFIERS> <PRIMARY_ID>SRS20625993</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AZ-CDC-LC1097590/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803031" alias="LC1097591"> <IDENTIFIERS> <PRIMARY_ID>SRX23803031</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097591</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625994"> <IDENTIFIERS> <PRIMARY_ID>SRS20625994</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AZ-CDC-LC1097591/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803032" alias="LC1097595"> <IDENTIFIERS> <PRIMARY_ID>SRX23803032</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097595</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625995"> <IDENTIFIERS> <PRIMARY_ID>SRS20625995</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097595/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803033" alias="LC1097596"> <IDENTIFIERS> <PRIMARY_ID>SRX23803033</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097596</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625996"> <IDENTIFIERS> <PRIMARY_ID>SRS20625996</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097596/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803034" alias="LC1097597"> <IDENTIFIERS> <PRIMARY_ID>SRX23803034</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097597</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625997"> <IDENTIFIERS> <PRIMARY_ID>SRS20625997</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AR-CDC-LC1097597/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803035" alias="LC1097599"> <IDENTIFIERS> <PRIMARY_ID>SRX23803035</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097599</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625998"> <IDENTIFIERS> <PRIMARY_ID>SRS20625998</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AZ-CDC-LC1097599/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803036" alias="LC1097600"> <IDENTIFIERS> <PRIMARY_ID>SRX23803036</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097600</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625999"> <IDENTIFIERS> <PRIMARY_ID>SRS20625999</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AZ-CDC-LC1097600/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803037" alias="LC1097603"> <IDENTIFIERS> <PRIMARY_ID>SRX23803037</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097603</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626000"> <IDENTIFIERS> <PRIMARY_ID>SRS20626000</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097603/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803038" alias="LC1097604"> <IDENTIFIERS> <PRIMARY_ID>SRX23803038</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097604</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626001"> <IDENTIFIERS> <PRIMARY_ID>SRS20626001</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MO-CDC-LC1097604/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803039" alias="LC1097605"> <IDENTIFIERS> <PRIMARY_ID>SRX23803039</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097605</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626002"> <IDENTIFIERS> <PRIMARY_ID>SRS20626002</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/WA-CDC-LC1097605/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803040" alias="LC1097614"> <IDENTIFIERS> <PRIMARY_ID>SRX23803040</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097614</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626004"> <IDENTIFIERS> <PRIMARY_ID>SRS20626004</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097614/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803041" alias="LC1097615"> <IDENTIFIERS> <PRIMARY_ID>SRX23803041</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097615</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626003"> <IDENTIFIERS> <PRIMARY_ID>SRS20626003</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097615/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803042" alias="LC1097616"> <IDENTIFIERS> <PRIMARY_ID>SRX23803042</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097616</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626005"> <IDENTIFIERS> <PRIMARY_ID>SRS20626005</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097616/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803043" alias="LC1097618"> <IDENTIFIERS> <PRIMARY_ID>SRX23803043</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097618</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626006"> <IDENTIFIERS> <PRIMARY_ID>SRS20626006</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-LC1097618/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803044" alias="LC1097621"> <IDENTIFIERS> <PRIMARY_ID>SRX23803044</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097621</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626007"> <IDENTIFIERS> <PRIMARY_ID>SRS20626007</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-LC1097621/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803045" alias="LC1097622"> <IDENTIFIERS> <PRIMARY_ID>SRX23803045</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097622</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626008"> <IDENTIFIERS> <PRIMARY_ID>SRS20626008</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-LC1097622/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803046" alias="LC1097637"> <IDENTIFIERS> <PRIMARY_ID>SRX23803046</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097637</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626009"> <IDENTIFIERS> <PRIMARY_ID>SRS20626009</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097637/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803047" alias="LC1097638"> <IDENTIFIERS> <PRIMARY_ID>SRX23803047</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097638</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626010"> <IDENTIFIERS> <PRIMARY_ID>SRS20626010</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097638/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803048" alias="LC1098025"> <IDENTIFIERS> <PRIMARY_ID>SRX23803048</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098025</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626011"> <IDENTIFIERS> <PRIMARY_ID>SRS20626011</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1098025/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803049" alias="LC1098032"> <IDENTIFIERS> <PRIMARY_ID>SRX23803049</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098032</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626012"> <IDENTIFIERS> <PRIMARY_ID>SRS20626012</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098032/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803050" alias="LC1098034"> <IDENTIFIERS> <PRIMARY_ID>SRX23803050</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098034</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626014"> <IDENTIFIERS> <PRIMARY_ID>SRS20626014</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098034/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803051" alias="LC1098035"> <IDENTIFIERS> <PRIMARY_ID>SRX23803051</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098035</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626013"> <IDENTIFIERS> <PRIMARY_ID>SRS20626013</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098035/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803052" alias="LC1098043"> <IDENTIFIERS> <PRIMARY_ID>SRX23803052</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098043</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626016"> <IDENTIFIERS> <PRIMARY_ID>SRS20626016</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098043/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803053" alias="LC1098058"> <IDENTIFIERS> <PRIMARY_ID>SRX23803053</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098058</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626015"> <IDENTIFIERS> <PRIMARY_ID>SRS20626015</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1098058/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803054" alias="LC1098064"> <IDENTIFIERS> <PRIMARY_ID>SRX23803054</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098064</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626017"> <IDENTIFIERS> <PRIMARY_ID>SRS20626017</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1098064/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803055" alias="LC1098088"> <IDENTIFIERS> <PRIMARY_ID>SRX23803055</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098088</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626020"> <IDENTIFIERS> <PRIMARY_ID>SRS20626020</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098088/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803056" alias="LC1098089"> <IDENTIFIERS> <PRIMARY_ID>SRX23803056</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098089</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626019"> <IDENTIFIERS> <PRIMARY_ID>SRS20626019</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098089/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803057" alias="LC1098092"> <IDENTIFIERS> <PRIMARY_ID>SRX23803057</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098092</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626018"> <IDENTIFIERS> <PRIMARY_ID>SRS20626018</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098092/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803058" alias="LC1098098"> <IDENTIFIERS> <PRIMARY_ID>SRX23803058</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098098</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626021"> <IDENTIFIERS> <PRIMARY_ID>SRS20626021</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098098/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803059" alias="LC1098100"> <IDENTIFIERS> <PRIMARY_ID>SRX23803059</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098100</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626022"> <IDENTIFIERS> <PRIMARY_ID>SRS20626022</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1098100/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803060" alias="LC1098102"> <IDENTIFIERS> <PRIMARY_ID>SRX23803060</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098102</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626023"> <IDENTIFIERS> <PRIMARY_ID>SRS20626023</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098102/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803061" alias="LC1098103"> <IDENTIFIERS> <PRIMARY_ID>SRX23803061</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098103</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626024"> <IDENTIFIERS> <PRIMARY_ID>SRS20626024</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098103/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803062" alias="LC1098106"> <IDENTIFIERS> <PRIMARY_ID>SRX23803062</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098106</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626025"> <IDENTIFIERS> <PRIMARY_ID>SRS20626025</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1098106/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803063" alias="LC1098109"> <IDENTIFIERS> <PRIMARY_ID>SRX23803063</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098109</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626026"> <IDENTIFIERS> <PRIMARY_ID>SRS20626026</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098109/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803064" alias="LC1098110"> <IDENTIFIERS> <PRIMARY_ID>SRX23803064</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098110</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626027"> <IDENTIFIERS> <PRIMARY_ID>SRS20626027</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098110/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803065" alias="LC1098114"> <IDENTIFIERS> <PRIMARY_ID>SRX23803065</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098114</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626028"> <IDENTIFIERS> <PRIMARY_ID>SRS20626028</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098114/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803066" alias="LC1098115"> <IDENTIFIERS> <PRIMARY_ID>SRX23803066</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098115</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626029"> <IDENTIFIERS> <PRIMARY_ID>SRS20626029</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098115/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803067" alias="LC1098116"> <IDENTIFIERS> <PRIMARY_ID>SRX23803067</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098116</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626031"> <IDENTIFIERS> <PRIMARY_ID>SRS20626031</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1098116/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803068" alias="LC1098120"> <IDENTIFIERS> <PRIMARY_ID>SRX23803068</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098120</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626030"> <IDENTIFIERS> <PRIMARY_ID>SRS20626030</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IN-CDC-LC1098120/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803069" alias="LC1098121"> <IDENTIFIERS> <PRIMARY_ID>SRX23803069</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098121</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626032"> <IDENTIFIERS> <PRIMARY_ID>SRS20626032</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1098121/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803070" alias="LC1098122"> <IDENTIFIERS> <PRIMARY_ID>SRX23803070</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098122</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626033"> <IDENTIFIERS> <PRIMARY_ID>SRS20626033</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MI-CDC-LC1098122/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803071" alias="LC1098125"> <IDENTIFIERS> <PRIMARY_ID>SRX23803071</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098125</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626034"> <IDENTIFIERS> <PRIMARY_ID>SRS20626034</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/OH-CDC-LC1098125/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803072" alias="LC1098127"> <IDENTIFIERS> <PRIMARY_ID>SRX23803072</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098127</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626035"> <IDENTIFIERS> <PRIMARY_ID>SRS20626035</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098127/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803073" alias="LC1098129"> <IDENTIFIERS> <PRIMARY_ID>SRX23803073</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098129</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626037"> <IDENTIFIERS> <PRIMARY_ID>SRS20626037</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098129/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803074" alias="LC1098130"> <IDENTIFIERS> <PRIMARY_ID>SRX23803074</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098130</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626036"> <IDENTIFIERS> <PRIMARY_ID>SRS20626036</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098130/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803075" alias="LC1098132"> <IDENTIFIERS> <PRIMARY_ID>SRX23803075</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098132</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626038"> <IDENTIFIERS> <PRIMARY_ID>SRS20626038</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098132/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803076" alias="LC1098134"> <IDENTIFIERS> <PRIMARY_ID>SRX23803076</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098134</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626039"> <IDENTIFIERS> <PRIMARY_ID>SRS20626039</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098134/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803077" alias="LC1098135"> <IDENTIFIERS> <PRIMARY_ID>SRX23803077</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098135</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626040"> <IDENTIFIERS> <PRIMARY_ID>SRS20626040</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098135/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803078" alias="LC1098138"> <IDENTIFIERS> <PRIMARY_ID>SRX23803078</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098138</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626041"> <IDENTIFIERS> <PRIMARY_ID>SRS20626041</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098138/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803079" alias="LC1098139"> <IDENTIFIERS> <PRIMARY_ID>SRX23803079</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098139</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626042"> <IDENTIFIERS> <PRIMARY_ID>SRS20626042</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098139/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803080" alias="LC1098206"> <IDENTIFIERS> <PRIMARY_ID>SRX23803080</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098206</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626044"> <IDENTIFIERS> <PRIMARY_ID>SRS20626044</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098206/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803081" alias="LC1098207"> <IDENTIFIERS> <PRIMARY_ID>SRX23803081</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098207</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626043"> <IDENTIFIERS> <PRIMARY_ID>SRS20626043</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098207/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803082" alias="LC1098211"> <IDENTIFIERS> <PRIMARY_ID>SRX23803082</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098211</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626045"> <IDENTIFIERS> <PRIMARY_ID>SRS20626045</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098211/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803083" alias="LC1098212"> <IDENTIFIERS> <PRIMARY_ID>SRX23803083</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098212</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626046"> <IDENTIFIERS> <PRIMARY_ID>SRS20626046</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098212/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803084" alias="LC1098217"> <IDENTIFIERS> <PRIMARY_ID>SRX23803084</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098217</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626047"> <IDENTIFIERS> <PRIMARY_ID>SRS20626047</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098217/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803085" alias="LC1098224"> <IDENTIFIERS> <PRIMARY_ID>SRX23803085</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098224</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626048"> <IDENTIFIERS> <PRIMARY_ID>SRS20626048</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1098224/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803086" alias="LC1098226"> <IDENTIFIERS> <PRIMARY_ID>SRX23803086</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098226</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626049"> <IDENTIFIERS> <PRIMARY_ID>SRS20626049</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AZ-CDC-LC1098226/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803087" alias="LC1098227"> <IDENTIFIERS> <PRIMARY_ID>SRX23803087</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098227</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626050"> <IDENTIFIERS> <PRIMARY_ID>SRS20626050</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AZ-CDC-LC1098227/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803088" alias="LC1098231"> <IDENTIFIERS> <PRIMARY_ID>SRX23803088</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098231</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626051"> <IDENTIFIERS> <PRIMARY_ID>SRS20626051</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1098231/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803089" alias="LC1098232"> <IDENTIFIERS> <PRIMARY_ID>SRX23803089</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098232</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626052"> <IDENTIFIERS> <PRIMARY_ID>SRS20626052</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1098232/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803090" alias="LC1098242"> <IDENTIFIERS> <PRIMARY_ID>SRX23803090</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098242</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626053"> <IDENTIFIERS> <PRIMARY_ID>SRS20626053</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1098242/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803091" alias="LC1098243"> <IDENTIFIERS> <PRIMARY_ID>SRX23803091</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098243</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626054"> <IDENTIFIERS> <PRIMARY_ID>SRS20626054</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1098243/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803092" alias="LC1098259"> <IDENTIFIERS> <PRIMARY_ID>SRX23803092</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098259</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626055"> <IDENTIFIERS> <PRIMARY_ID>SRS20626055</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098259/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803093" alias="LC1098260"> <IDENTIFIERS> <PRIMARY_ID>SRX23803093</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098260</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626056"> <IDENTIFIERS> <PRIMARY_ID>SRS20626056</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098260/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803094" alias="LC1098262"> <IDENTIFIERS> <PRIMARY_ID>SRX23803094</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098262</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626058"> <IDENTIFIERS> <PRIMARY_ID>SRS20626058</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098262/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803095" alias="LC1098263"> <IDENTIFIERS> <PRIMARY_ID>SRX23803095</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098263</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626057"> <IDENTIFIERS> <PRIMARY_ID>SRS20626057</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098263/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803096" alias="LC1098264"> <IDENTIFIERS> <PRIMARY_ID>SRX23803096</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098264</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626059"> <IDENTIFIERS> <PRIMARY_ID>SRS20626059</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098264/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803097" alias="LC1098268"> <IDENTIFIERS> <PRIMARY_ID>SRX23803097</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098268</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626060"> <IDENTIFIERS> <PRIMARY_ID>SRS20626060</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098268/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803098" alias="LC1098275"> <IDENTIFIERS> <PRIMARY_ID>SRX23803098</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098275</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626061"> <IDENTIFIERS> <PRIMARY_ID>SRS20626061</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098275/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803099" alias="LC1098278"> <IDENTIFIERS> <PRIMARY_ID>SRX23803099</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098278</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626062"> <IDENTIFIERS> <PRIMARY_ID>SRS20626062</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098278/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803100" alias="LC1098279"> <IDENTIFIERS> <PRIMARY_ID>SRX23803100</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098279</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626063"> <IDENTIFIERS> <PRIMARY_ID>SRS20626063</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098279/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803101" alias="LC1098280"> <IDENTIFIERS> <PRIMARY_ID>SRX23803101</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098280</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626064"> <IDENTIFIERS> <PRIMARY_ID>SRS20626064</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098280/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803102" alias="LC1098286"> <IDENTIFIERS> <PRIMARY_ID>SRX23803102</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098286</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626065"> <IDENTIFIERS> <PRIMARY_ID>SRS20626065</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098286/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803103" alias="LC1098289"> <IDENTIFIERS> <PRIMARY_ID>SRX23803103</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098289</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626066"> <IDENTIFIERS> <PRIMARY_ID>SRS20626066</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098289/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803104" alias="LC1098290"> <IDENTIFIERS> <PRIMARY_ID>SRX23803104</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098290</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626067"> <IDENTIFIERS> <PRIMARY_ID>SRS20626067</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098290/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803105" alias="LC1098291"> <IDENTIFIERS> <PRIMARY_ID>SRX23803105</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098291</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626069"> <IDENTIFIERS> <PRIMARY_ID>SRS20626069</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098291/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803106" alias="LC1098292"> <IDENTIFIERS> <PRIMARY_ID>SRX23803106</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098292</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626068"> <IDENTIFIERS> <PRIMARY_ID>SRS20626068</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098292/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803107" alias="LC1098300"> <IDENTIFIERS> <PRIMARY_ID>SRX23803107</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098300</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626070"> <IDENTIFIERS> <PRIMARY_ID>SRS20626070</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098300/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803108" alias="LC1098305"> <IDENTIFIERS> <PRIMARY_ID>SRX23803108</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098305</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626071"> <IDENTIFIERS> <PRIMARY_ID>SRS20626071</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098305/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803109" alias="LC1098307"> <IDENTIFIERS> <PRIMARY_ID>SRX23803109</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098307</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626072"> <IDENTIFIERS> <PRIMARY_ID>SRS20626072</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098307/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803110" alias="LC1098308"> <IDENTIFIERS> <PRIMARY_ID>SRX23803110</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098308</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626075"> <IDENTIFIERS> <PRIMARY_ID>SRS20626075</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098308/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803111" alias="LC1098313"> <IDENTIFIERS> <PRIMARY_ID>SRX23803111</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098313</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626073"> <IDENTIFIERS> <PRIMARY_ID>SRS20626073</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098313/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803112" alias="LC1098659"> <IDENTIFIERS> <PRIMARY_ID>SRX23803112</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098659</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626074"> <IDENTIFIERS> <PRIMARY_ID>SRS20626074</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098659/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803113" alias="LC1098663"> <IDENTIFIERS> <PRIMARY_ID>SRX23803113</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098663</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626076"> <IDENTIFIERS> <PRIMARY_ID>SRS20626076</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098663/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803114" alias="LC1098667"> <IDENTIFIERS> <PRIMARY_ID>SRX23803114</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098667</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626077"> <IDENTIFIERS> <PRIMARY_ID>SRS20626077</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098667/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803115" alias="LC1098670"> <IDENTIFIERS> <PRIMARY_ID>SRX23803115</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098670</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626078"> <IDENTIFIERS> <PRIMARY_ID>SRS20626078</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098670/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803116" alias="LC1098671"> <IDENTIFIERS> <PRIMARY_ID>SRX23803116</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098671</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626079"> <IDENTIFIERS> <PRIMARY_ID>SRS20626079</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098671/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803117" alias="LC1098673"> <IDENTIFIERS> <PRIMARY_ID>SRX23803117</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098673</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626080"> <IDENTIFIERS> <PRIMARY_ID>SRS20626080</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098673/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803118" alias="LC1098682"> <IDENTIFIERS> <PRIMARY_ID>SRX23803118</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098682</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626081"> <IDENTIFIERS> <PRIMARY_ID>SRS20626081</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098682/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803119" alias="LC1098689"> <IDENTIFIERS> <PRIMARY_ID>SRX23803119</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098689</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626082"> <IDENTIFIERS> <PRIMARY_ID>SRS20626082</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098689/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803120" alias="LC1098692"> <IDENTIFIERS> <PRIMARY_ID>SRX23803120</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098692</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626083"> <IDENTIFIERS> <PRIMARY_ID>SRS20626083</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098692/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803121" alias="LC1098693"> <IDENTIFIERS> <PRIMARY_ID>SRX23803121</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098693</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626084"> <IDENTIFIERS> <PRIMARY_ID>SRS20626084</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098693/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803122" alias="LC1098695"> <IDENTIFIERS> <PRIMARY_ID>SRX23803122</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098695</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626085"> <IDENTIFIERS> <PRIMARY_ID>SRS20626085</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098695/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803123" alias="LC1098697"> <IDENTIFIERS> <PRIMARY_ID>SRX23803123</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098697</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626086"> <IDENTIFIERS> <PRIMARY_ID>SRS20626086</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098697/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803124" alias="LC1098698"> <IDENTIFIERS> <PRIMARY_ID>SRX23803124</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098698</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626087"> <IDENTIFIERS> <PRIMARY_ID>SRS20626087</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098698/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803125" alias="LC1098702"> <IDENTIFIERS> <PRIMARY_ID>SRX23803125</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098702</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626088"> <IDENTIFIERS> <PRIMARY_ID>SRS20626088</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098702/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803126" alias="LC1098704"> <IDENTIFIERS> <PRIMARY_ID>SRX23803126</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098704</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626089"> <IDENTIFIERS> <PRIMARY_ID>SRS20626089</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098704/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803127" alias="LC1098709"> <IDENTIFIERS> <PRIMARY_ID>SRX23803127</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098709</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626090"> <IDENTIFIERS> <PRIMARY_ID>SRS20626090</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098709/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803128" alias="LC1098710"> <IDENTIFIERS> <PRIMARY_ID>SRX23803128</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098710</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626093"> <IDENTIFIERS> <PRIMARY_ID>SRS20626093</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098710/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803129" alias="LC1098711"> <IDENTIFIERS> <PRIMARY_ID>SRX23803129</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098711</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626092"> <IDENTIFIERS> <PRIMARY_ID>SRS20626092</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098711/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803130" alias="LC1098715"> <IDENTIFIERS> <PRIMARY_ID>SRX23803130</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098715</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626091"> <IDENTIFIERS> <PRIMARY_ID>SRS20626091</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MA-CDC-LC1098715/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803131" alias="LC1098717"> <IDENTIFIERS> <PRIMARY_ID>SRX23803131</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098717</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626094"> <IDENTIFIERS> <PRIMARY_ID>SRS20626094</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098717/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803132" alias="LC1098718"> <IDENTIFIERS> <PRIMARY_ID>SRX23803132</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098718</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626095"> <IDENTIFIERS> <PRIMARY_ID>SRS20626095</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098718/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803133" alias="LC1098719"> <IDENTIFIERS> <PRIMARY_ID>SRX23803133</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098719</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626096"> <IDENTIFIERS> <PRIMARY_ID>SRS20626096</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098719/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803134" alias="LC1098723"> <IDENTIFIERS> <PRIMARY_ID>SRX23803134</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098723</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626098"> <IDENTIFIERS> <PRIMARY_ID>SRS20626098</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098723/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803135" alias="LC1098730"> <IDENTIFIERS> <PRIMARY_ID>SRX23803135</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098730</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626097"> <IDENTIFIERS> <PRIMARY_ID>SRS20626097</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098730/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803136" alias="LC1098734"> <IDENTIFIERS> <PRIMARY_ID>SRX23803136</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098734</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626099"> <IDENTIFIERS> <PRIMARY_ID>SRS20626099</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098734/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803137" alias="LC1098738"> <IDENTIFIERS> <PRIMARY_ID>SRX23803137</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098738</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626100"> <IDENTIFIERS> <PRIMARY_ID>SRS20626100</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098738/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803138" alias="LC1098739"> <IDENTIFIERS> <PRIMARY_ID>SRX23803138</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098739</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626101"> <IDENTIFIERS> <PRIMARY_ID>SRS20626101</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098739/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803139" alias="LC1098747"> <IDENTIFIERS> <PRIMARY_ID>SRX23803139</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098747</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626102"> <IDENTIFIERS> <PRIMARY_ID>SRS20626102</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098747/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803140" alias="LC1098748"> <IDENTIFIERS> <PRIMARY_ID>SRX23803140</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098748</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626104"> <IDENTIFIERS> <PRIMARY_ID>SRS20626104</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098748/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803141" alias="LC1098750"> <IDENTIFIERS> <PRIMARY_ID>SRX23803141</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098750</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626103"> <IDENTIFIERS> <PRIMARY_ID>SRS20626103</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098750/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803142" alias="LC1098753"> <IDENTIFIERS> <PRIMARY_ID>SRX23803142</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098753</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626105"> <IDENTIFIERS> <PRIMARY_ID>SRS20626105</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098753/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803143" alias="LC1098756"> <IDENTIFIERS> <PRIMARY_ID>SRX23803143</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098756</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626106"> <IDENTIFIERS> <PRIMARY_ID>SRS20626106</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098756/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803144" alias="LC1099008"> <IDENTIFIERS> <PRIMARY_ID>SRX23803144</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099008</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626107"> <IDENTIFIERS> <PRIMARY_ID>SRS20626107</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1099008/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803145" alias="LC1099009"> <IDENTIFIERS> <PRIMARY_ID>SRX23803145</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099009</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626108"> <IDENTIFIERS> <PRIMARY_ID>SRS20626108</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1099009/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803146" alias="LC1099010"> <IDENTIFIERS> <PRIMARY_ID>SRX23803146</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099010</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626109"> <IDENTIFIERS> <PRIMARY_ID>SRS20626109</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1099010/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803147" alias="LC1099017"> <IDENTIFIERS> <PRIMARY_ID>SRX23803147</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099017</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626110"> <IDENTIFIERS> <PRIMARY_ID>SRS20626110</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1099017/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803148" alias="LC1099019"> <IDENTIFIERS> <PRIMARY_ID>SRX23803148</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099019</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626111"> <IDENTIFIERS> <PRIMARY_ID>SRS20626111</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1099019/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803149" alias="LC1099021"> <IDENTIFIERS> <PRIMARY_ID>SRX23803149</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099021</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626112"> <IDENTIFIERS> <PRIMARY_ID>SRS20626112</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1099021/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803150" alias="LC1099023"> <IDENTIFIERS> <PRIMARY_ID>SRX23803150</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099023</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626113"> <IDENTIFIERS> <PRIMARY_ID>SRS20626113</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1099023/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803151" alias="LC1099026"> <IDENTIFIERS> <PRIMARY_ID>SRX23803151</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099026</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626116"> <IDENTIFIERS> <PRIMARY_ID>SRS20626116</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1099026/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803152" alias="LC1099033"> <IDENTIFIERS> <PRIMARY_ID>SRX23803152</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099033</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626114"> <IDENTIFIERS> <PRIMARY_ID>SRS20626114</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1099033/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803153" alias="LC1099034"> <IDENTIFIERS> <PRIMARY_ID>SRX23803153</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099034</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626115"> <IDENTIFIERS> <PRIMARY_ID>SRS20626115</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1099034/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803154" alias="LC1099035"> <IDENTIFIERS> <PRIMARY_ID>SRX23803154</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099035</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626117"> <IDENTIFIERS> <PRIMARY_ID>SRS20626117</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1099035/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803155" alias="LC1099041"> <IDENTIFIERS> <PRIMARY_ID>SRX23803155</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099041</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626118"> <IDENTIFIERS> <PRIMARY_ID>SRS20626118</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1099041/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803156" alias="LC1099044"> <IDENTIFIERS> <PRIMARY_ID>SRX23803156</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099044</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626119"> <IDENTIFIERS> <PRIMARY_ID>SRS20626119</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1099044/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803157" alias="LC1099048"> <IDENTIFIERS> <PRIMARY_ID>SRX23803157</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099048</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626120"> <IDENTIFIERS> <PRIMARY_ID>SRS20626120</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1099048/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803158" alias="LC1097648"> <IDENTIFIERS> <PRIMARY_ID>SRX23803158</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097648</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626121"> <IDENTIFIERS> <PRIMARY_ID>SRS20626121</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1097648/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803159" alias="LC1097651"> <IDENTIFIERS> <PRIMARY_ID>SRX23803159</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097651</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626122"> <IDENTIFIERS> <PRIMARY_ID>SRS20626122</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1097651/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803160" alias="LC1097653"> <IDENTIFIERS> <PRIMARY_ID>SRX23803160</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097653</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626123"> <IDENTIFIERS> <PRIMARY_ID>SRS20626123</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097653/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803161" alias="LC1097666"> <IDENTIFIERS> <PRIMARY_ID>SRX23803161</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097666</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626124"> <IDENTIFIERS> <PRIMARY_ID>SRS20626124</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097666/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803162" alias="LC1097667"> <IDENTIFIERS> <PRIMARY_ID>SRX23803162</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097667</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626125"> <IDENTIFIERS> <PRIMARY_ID>SRS20626125</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097667/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803163" alias="LC1097677"> <IDENTIFIERS> <PRIMARY_ID>SRX23803163</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097677</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626126"> <IDENTIFIERS> <PRIMARY_ID>SRS20626126</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097677/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803164" alias="LC1097690"> <IDENTIFIERS> <PRIMARY_ID>SRX23803164</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097690</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626127"> <IDENTIFIERS> <PRIMARY_ID>SRS20626127</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097690/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803165" alias="LC1097692"> <IDENTIFIERS> <PRIMARY_ID>SRX23803165</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097692</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626129"> <IDENTIFIERS> <PRIMARY_ID>SRS20626129</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097692/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803166" alias="LC1097695"> <IDENTIFIERS> <PRIMARY_ID>SRX23803166</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097695</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626128"> <IDENTIFIERS> <PRIMARY_ID>SRS20626128</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097695/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803167" alias="LC1097697"> <IDENTIFIERS> <PRIMARY_ID>SRX23803167</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097697</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626130"> <IDENTIFIERS> <PRIMARY_ID>SRS20626130</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097697/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803168" alias="LC1097701"> <IDENTIFIERS> <PRIMARY_ID>SRX23803168</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097701</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626131"> <IDENTIFIERS> <PRIMARY_ID>SRS20626131</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097701/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803169" alias="LC1097704"> <IDENTIFIERS> <PRIMARY_ID>SRX23803169</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097704</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626132"> <IDENTIFIERS> <PRIMARY_ID>SRS20626132</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1097704/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803170" alias="LC1097705"> <IDENTIFIERS> <PRIMARY_ID>SRX23803170</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097705</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626133"> <IDENTIFIERS> <PRIMARY_ID>SRS20626133</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097705/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803171" alias="LC1097706"> <IDENTIFIERS> <PRIMARY_ID>SRX23803171</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097706</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626134"> <IDENTIFIERS> <PRIMARY_ID>SRS20626134</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/KY-CDC-LC1097706/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803172" alias="LC1097715"> <IDENTIFIERS> <PRIMARY_ID>SRX23803172</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097715</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626135"> <IDENTIFIERS> <PRIMARY_ID>SRS20626135</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097715/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803173" alias="LC1097718"> <IDENTIFIERS> <PRIMARY_ID>SRX23803173</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097718</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626136"> <IDENTIFIERS> <PRIMARY_ID>SRS20626136</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1097718/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803174" alias="LC1097721"> <IDENTIFIERS> <PRIMARY_ID>SRX23803174</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097721</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626137"> <IDENTIFIERS> <PRIMARY_ID>SRS20626137</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097721/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803175" alias="LC1097726"> <IDENTIFIERS> <PRIMARY_ID>SRX23803175</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097726</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626138"> <IDENTIFIERS> <PRIMARY_ID>SRS20626138</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097726/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803176" alias="LC1097727"> <IDENTIFIERS> <PRIMARY_ID>SRX23803176</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097727</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626139"> <IDENTIFIERS> <PRIMARY_ID>SRS20626139</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/OH-CDC-LC1097727/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803177" alias="LC1097730"> <IDENTIFIERS> <PRIMARY_ID>SRX23803177</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097730</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626140"> <IDENTIFIERS> <PRIMARY_ID>SRS20626140</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/OH-CDC-LC1097730/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803178" alias="LC1097731"> <IDENTIFIERS> <PRIMARY_ID>SRX23803178</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097731</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626141"> <IDENTIFIERS> <PRIMARY_ID>SRS20626141</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097731/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803179" alias="LC1097732"> <IDENTIFIERS> <PRIMARY_ID>SRX23803179</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097732</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626142"> <IDENTIFIERS> <PRIMARY_ID>SRS20626142</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/KY-CDC-LC1097732/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803180" alias="LC1097743"> <IDENTIFIERS> <PRIMARY_ID>SRX23803180</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097743</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626143"> <IDENTIFIERS> <PRIMARY_ID>SRS20626143</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1097743/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803181" alias="LC1097744"> <IDENTIFIERS> <PRIMARY_ID>SRX23803181</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097744</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626144"> <IDENTIFIERS> <PRIMARY_ID>SRS20626144</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097744/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803182" alias="LC1097749"> <IDENTIFIERS> <PRIMARY_ID>SRX23803182</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097749</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626145"> <IDENTIFIERS> <PRIMARY_ID>SRS20626145</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/OH-CDC-LC1097749/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803183" alias="LC1097750"> <IDENTIFIERS> <PRIMARY_ID>SRX23803183</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097750</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626147"> <IDENTIFIERS> <PRIMARY_ID>SRS20626147</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/WI-CDC-LC1097750/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803184" alias="LC1097751"> <IDENTIFIERS> <PRIMARY_ID>SRX23803184</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097751</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626146"> <IDENTIFIERS> <PRIMARY_ID>SRS20626146</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/KY-CDC-LC1097751/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803185" alias="LC1097755"> <IDENTIFIERS> <PRIMARY_ID>SRX23803185</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097755</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626148"> <IDENTIFIERS> <PRIMARY_ID>SRS20626148</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097755/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803186" alias="LC1097757"> <IDENTIFIERS> <PRIMARY_ID>SRX23803186</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097757</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626149"> <IDENTIFIERS> <PRIMARY_ID>SRS20626149</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1097757/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803187" alias="LC1097761"> <IDENTIFIERS> <PRIMARY_ID>SRX23803187</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097761</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626150"> <IDENTIFIERS> <PRIMARY_ID>SRS20626150</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097761/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803188" alias="LC1097764"> <IDENTIFIERS> <PRIMARY_ID>SRX23803188</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097764</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626151"> <IDENTIFIERS> <PRIMARY_ID>SRS20626151</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TN-CDC-LC1097764/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803189" alias="LC1097765"> <IDENTIFIERS> <PRIMARY_ID>SRX23803189</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097765</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626153"> <IDENTIFIERS> <PRIMARY_ID>SRS20626153</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097765/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803190" alias="LC1097767"> <IDENTIFIERS> <PRIMARY_ID>SRX23803190</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097767</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626152"> <IDENTIFIERS> <PRIMARY_ID>SRS20626152</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097767/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803191" alias="LC1097769"> <IDENTIFIERS> <PRIMARY_ID>SRX23803191</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097769</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626154"> <IDENTIFIERS> <PRIMARY_ID>SRS20626154</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097769/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803192" alias="LC1097770"> <IDENTIFIERS> <PRIMARY_ID>SRX23803192</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097770</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626155"> <IDENTIFIERS> <PRIMARY_ID>SRS20626155</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097770/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803193" alias="LC1097773"> <IDENTIFIERS> <PRIMARY_ID>SRX23803193</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097773</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626156"> <IDENTIFIERS> <PRIMARY_ID>SRS20626156</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097773/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803194" alias="LC1097779"> <IDENTIFIERS> <PRIMARY_ID>SRX23803194</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097779</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626157"> <IDENTIFIERS> <PRIMARY_ID>SRS20626157</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097779/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803195" alias="LC1097782"> <IDENTIFIERS> <PRIMARY_ID>SRX23803195</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097782</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626158"> <IDENTIFIERS> <PRIMARY_ID>SRS20626158</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097782/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803196" alias="LC1097784"> <IDENTIFIERS> <PRIMARY_ID>SRX23803196</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097784</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626159"> <IDENTIFIERS> <PRIMARY_ID>SRS20626159</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097784/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803197" alias="LC1097789"> <IDENTIFIERS> <PRIMARY_ID>SRX23803197</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097789</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626160"> <IDENTIFIERS> <PRIMARY_ID>SRS20626160</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097789/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803198" alias="LC1097790"> <IDENTIFIERS> <PRIMARY_ID>SRX23803198</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097790</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626161"> <IDENTIFIERS> <PRIMARY_ID>SRS20626161</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097790/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803199" alias="LC1097791"> <IDENTIFIERS> <PRIMARY_ID>SRX23803199</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097791</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626162"> <IDENTIFIERS> <PRIMARY_ID>SRS20626162</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1097791/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803200" alias="LC1097794"> <IDENTIFIERS> <PRIMARY_ID>SRX23803200</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097794</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626164"> <IDENTIFIERS> <PRIMARY_ID>SRS20626164</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097794/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803201" alias="LC1097795"> <IDENTIFIERS> <PRIMARY_ID>SRX23803201</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097795</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626163"> <IDENTIFIERS> <PRIMARY_ID>SRS20626163</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097795/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803202" alias="LC1097797"> <IDENTIFIERS> <PRIMARY_ID>SRX23803202</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097797</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626165"> <IDENTIFIERS> <PRIMARY_ID>SRS20626165</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1097797/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803203" alias="LC1097799"> <IDENTIFIERS> <PRIMARY_ID>SRX23803203</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097799</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626166"> <IDENTIFIERS> <PRIMARY_ID>SRS20626166</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1097799/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803204" alias="LC1097807"> <IDENTIFIERS> <PRIMARY_ID>SRX23803204</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097807</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626168"> <IDENTIFIERS> <PRIMARY_ID>SRS20626168</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097807/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803205" alias="LC1097808"> <IDENTIFIERS> <PRIMARY_ID>SRX23803205</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097808</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626167"> <IDENTIFIERS> <PRIMARY_ID>SRS20626167</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097808/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803206" alias="LC1097817"> <IDENTIFIERS> <PRIMARY_ID>SRX23803206</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097817</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626169"> <IDENTIFIERS> <PRIMARY_ID>SRS20626169</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097817/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803207" alias="LC1097818"> <IDENTIFIERS> <PRIMARY_ID>SRX23803207</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097818</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626170"> <IDENTIFIERS> <PRIMARY_ID>SRS20626170</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/KY-CDC-LC1097818/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803208" alias="LC1097823"> <IDENTIFIERS> <PRIMARY_ID>SRX23803208</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097823</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626171"> <IDENTIFIERS> <PRIMARY_ID>SRS20626171</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097823/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803209" alias="LC1097826"> <IDENTIFIERS> <PRIMARY_ID>SRX23803209</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097826</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626173"> <IDENTIFIERS> <PRIMARY_ID>SRS20626173</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/WI-CDC-LC1097826/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803210" alias="LC1097846"> <IDENTIFIERS> <PRIMARY_ID>SRX23803210</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097846</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626172"> <IDENTIFIERS> <PRIMARY_ID>SRS20626172</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097846/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803211" alias="LC1097855"> <IDENTIFIERS> <PRIMARY_ID>SRX23803211</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097855</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626174"> <IDENTIFIERS> <PRIMARY_ID>SRS20626174</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097855/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803212" alias="LC1097858"> <IDENTIFIERS> <PRIMARY_ID>SRX23803212</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097858</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626175"> <IDENTIFIERS> <PRIMARY_ID>SRS20626175</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097858/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803213" alias="LC1097859"> <IDENTIFIERS> <PRIMARY_ID>SRX23803213</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097859</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626176"> <IDENTIFIERS> <PRIMARY_ID>SRS20626176</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097859/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803214" alias="LC1097860"> <IDENTIFIERS> <PRIMARY_ID>SRX23803214</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097860</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626178"> <IDENTIFIERS> <PRIMARY_ID>SRS20626178</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097860/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803215" alias="LC1097863"> <IDENTIFIERS> <PRIMARY_ID>SRX23803215</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097863</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626177"> <IDENTIFIERS> <PRIMARY_ID>SRS20626177</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/OH-CDC-LC1097863/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803216" alias="LC1097864"> <IDENTIFIERS> <PRIMARY_ID>SRX23803216</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097864</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626179"> <IDENTIFIERS> <PRIMARY_ID>SRS20626179</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1097864/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803217" alias="LC1097869"> <IDENTIFIERS> <PRIMARY_ID>SRX23803217</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097869</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626180"> <IDENTIFIERS> <PRIMARY_ID>SRS20626180</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TN-CDC-LC1097869/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803218" alias="LC1097870"> <IDENTIFIERS> <PRIMARY_ID>SRX23803218</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097870</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626181"> <IDENTIFIERS> <PRIMARY_ID>SRS20626181</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097870/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803219" alias="LC1097875"> <IDENTIFIERS> <PRIMARY_ID>SRX23803219</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097875</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626183"> <IDENTIFIERS> <PRIMARY_ID>SRS20626183</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1097875/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803220" alias="LC1097886"> <IDENTIFIERS> <PRIMARY_ID>SRX23803220</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097886</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626182"> <IDENTIFIERS> <PRIMARY_ID>SRS20626182</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097886/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803221" alias="LC1097887"> <IDENTIFIERS> <PRIMARY_ID>SRX23803221</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097887</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626184"> <IDENTIFIERS> <PRIMARY_ID>SRS20626184</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097887/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803222" alias="LC1098327"> <IDENTIFIERS> <PRIMARY_ID>SRX23803222</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098327</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626185"> <IDENTIFIERS> <PRIMARY_ID>SRS20626185</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MS-CDC-LC1098327/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803223" alias="LC1098329"> <IDENTIFIERS> <PRIMARY_ID>SRX23803223</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098329</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626186"> <IDENTIFIERS> <PRIMARY_ID>SRS20626186</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1098329/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803224" alias="LC1098332"> <IDENTIFIERS> <PRIMARY_ID>SRX23803224</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098332</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626188"> <IDENTIFIERS> <PRIMARY_ID>SRS20626188</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098332/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803225" alias="LC1098334"> <IDENTIFIERS> <PRIMARY_ID>SRX23803225</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098334</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626187"> <IDENTIFIERS> <PRIMARY_ID>SRS20626187</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1098334/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803226" alias="LC1098343"> <IDENTIFIERS> <PRIMARY_ID>SRX23803226</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098343</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626190"> <IDENTIFIERS> <PRIMARY_ID>SRS20626190</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1098343/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803227" alias="LC1098350"> <IDENTIFIERS> <PRIMARY_ID>SRX23803227</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098350</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626189"> <IDENTIFIERS> <PRIMARY_ID>SRS20626189</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1098350/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803228" alias="LC1098358"> <IDENTIFIERS> <PRIMARY_ID>SRX23803228</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098358</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626191"> <IDENTIFIERS> <PRIMARY_ID>SRS20626191</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1098358/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803229" alias="LC1098359"> <IDENTIFIERS> <PRIMARY_ID>SRX23803229</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098359</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626193"> <IDENTIFIERS> <PRIMARY_ID>SRS20626193</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1098359/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803230" alias="LC1098362"> <IDENTIFIERS> <PRIMARY_ID>SRX23803230</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098362</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626192"> <IDENTIFIERS> <PRIMARY_ID>SRS20626192</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1098362/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803231" alias="LC1098366"> <IDENTIFIERS> <PRIMARY_ID>SRX23803231</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098366</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626194"> <IDENTIFIERS> <PRIMARY_ID>SRS20626194</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1098366/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803232" alias="LC1098368"> <IDENTIFIERS> <PRIMARY_ID>SRX23803232</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098368</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626195"> <IDENTIFIERS> <PRIMARY_ID>SRS20626195</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1098368/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803233" alias="LC1098380"> <IDENTIFIERS> <PRIMARY_ID>SRX23803233</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098380</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626196"> <IDENTIFIERS> <PRIMARY_ID>SRS20626196</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1098380/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803234" alias="LC1098381"> <IDENTIFIERS> <PRIMARY_ID>SRX23803234</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098381</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626197"> <IDENTIFIERS> <PRIMARY_ID>SRS20626197</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1098381/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803235" alias="LC1098383"> <IDENTIFIERS> <PRIMARY_ID>SRX23803235</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098383</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626198"> <IDENTIFIERS> <PRIMARY_ID>SRS20626198</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1098383/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803236" alias="LC1098390"> <IDENTIFIERS> <PRIMARY_ID>SRX23803236</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098390</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626200"> <IDENTIFIERS> <PRIMARY_ID>SRS20626200</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098390/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803237" alias="LC1098391"> <IDENTIFIERS> <PRIMARY_ID>SRX23803237</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098391</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626199"> <IDENTIFIERS> <PRIMARY_ID>SRS20626199</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098391/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803238" alias="LC1098394"> <IDENTIFIERS> <PRIMARY_ID>SRX23803238</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098394</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626202"> <IDENTIFIERS> <PRIMARY_ID>SRS20626202</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098394/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803239" alias="LC1098403"> <IDENTIFIERS> <PRIMARY_ID>SRX23803239</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098403</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626201"> <IDENTIFIERS> <PRIMARY_ID>SRS20626201</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098403/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803240" alias="LC1098404"> <IDENTIFIERS> <PRIMARY_ID>SRX23803240</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098404</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626204"> <IDENTIFIERS> <PRIMARY_ID>SRS20626204</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098404/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803241" alias="LC1098406"> <IDENTIFIERS> <PRIMARY_ID>SRX23803241</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098406</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626203"> <IDENTIFIERS> <PRIMARY_ID>SRS20626203</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098406/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803242" alias="LC1098407"> <IDENTIFIERS> <PRIMARY_ID>SRX23803242</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098407</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626205"> <IDENTIFIERS> <PRIMARY_ID>SRS20626205</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098407/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803243" alias="LC1098410"> <IDENTIFIERS> <PRIMARY_ID>SRX23803243</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098410</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626206"> <IDENTIFIERS> <PRIMARY_ID>SRS20626206</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098410/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803244" alias="LC1098414"> <IDENTIFIERS> <PRIMARY_ID>SRX23803244</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098414</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626208"> <IDENTIFIERS> <PRIMARY_ID>SRS20626208</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098414/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803245" alias="LC1098421"> <IDENTIFIERS> <PRIMARY_ID>SRX23803245</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098421</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626207"> <IDENTIFIERS> <PRIMARY_ID>SRS20626207</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098421/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803246" alias="LC1098422"> <IDENTIFIERS> <PRIMARY_ID>SRX23803246</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098422</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626212"> <IDENTIFIERS> <PRIMARY_ID>SRS20626212</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098422/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803247" alias="LC1098423"> <IDENTIFIERS> <PRIMARY_ID>SRX23803247</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098423</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626211"> <IDENTIFIERS> <PRIMARY_ID>SRS20626211</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098423/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803248" alias="LC1098425"> <IDENTIFIERS> <PRIMARY_ID>SRX23803248</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098425</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626209"> <IDENTIFIERS> <PRIMARY_ID>SRS20626209</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098425/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803249" alias="LC1098427"> <IDENTIFIERS> <PRIMARY_ID>SRX23803249</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098427</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626210"> <IDENTIFIERS> <PRIMARY_ID>SRS20626210</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098427/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803250" alias="LC1098429"> <IDENTIFIERS> <PRIMARY_ID>SRX23803250</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098429</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626213"> <IDENTIFIERS> <PRIMARY_ID>SRS20626213</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098429/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803251" alias="LC1098430"> <IDENTIFIERS> <PRIMARY_ID>SRX23803251</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098430</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626214"> <IDENTIFIERS> <PRIMARY_ID>SRS20626214</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098430/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> </EXPERIMENT

SRX23802786 LC1098431 <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625749"> <IDENTIFIERS> <PRIMARY_ID>SRS20625749</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098431/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802787" alias="LC1098433"> <IDENTIFIERS> <PRIMARY_ID>SRX23802787</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098433</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625750"> <IDENTIFIERS> <PRIMARY_ID>SRS20625750</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098433/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802788" alias="LC1098758"> <IDENTIFIERS> <PRIMARY_ID>SRX23802788</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098758</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625751"> <IDENTIFIERS> <PRIMARY_ID>SRS20625751</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098758/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802789" alias="LC1098762"> <IDENTIFIERS> <PRIMARY_ID>SRX23802789</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098762</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625754"> <IDENTIFIERS> <PRIMARY_ID>SRS20625754</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098762/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802790" alias="LC1098768"> <IDENTIFIERS> <PRIMARY_ID>SRX23802790</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098768</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625752"> <IDENTIFIERS> <PRIMARY_ID>SRS20625752</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098768/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802791" alias="LC1098772"> <IDENTIFIERS> <PRIMARY_ID>SRX23802791</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098772</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625753"> <IDENTIFIERS> <PRIMARY_ID>SRS20625753</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098772/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802792" alias="LC1098774"> <IDENTIFIERS> <PRIMARY_ID>SRX23802792</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098774</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625755"> <IDENTIFIERS> <PRIMARY_ID>SRS20625755</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1098774/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802793" alias="LC1098775"> <IDENTIFIERS> <PRIMARY_ID>SRX23802793</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098775</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625756"> <IDENTIFIERS> <PRIMARY_ID>SRS20625756</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098775/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802794" alias="LC1098777"> <IDENTIFIERS> <PRIMARY_ID>SRX23802794</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098777</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625757"> <IDENTIFIERS> <PRIMARY_ID>SRS20625757</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098777/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802795" alias="LC1098778"> <IDENTIFIERS> <PRIMARY_ID>SRX23802795</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098778</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625759"> <IDENTIFIERS> <PRIMARY_ID>SRS20625759</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098778/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802796" alias="LC1098783"> <IDENTIFIERS> <PRIMARY_ID>SRX23802796</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098783</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625758"> <IDENTIFIERS> <PRIMARY_ID>SRS20625758</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098783/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802797" alias="LC1098787"> <IDENTIFIERS> <PRIMARY_ID>SRX23802797</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098787</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625760"> <IDENTIFIERS> <PRIMARY_ID>SRS20625760</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098787/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802798" alias="LC1098788"> <IDENTIFIERS> <PRIMARY_ID>SRX23802798</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098788</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625761"> <IDENTIFIERS> <PRIMARY_ID>SRS20625761</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098788/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802799" alias="LC1098790"> <IDENTIFIERS> <PRIMARY_ID>SRX23802799</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098790</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625762"> <IDENTIFIERS> <PRIMARY_ID>SRS20625762</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098790/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802800" alias="LC1098792"> <IDENTIFIERS> <PRIMARY_ID>SRX23802800</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098792</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625764"> <IDENTIFIERS> <PRIMARY_ID>SRS20625764</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098792/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802801" alias="LC1098794"> <IDENTIFIERS> <PRIMARY_ID>SRX23802801</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098794</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625763"> <IDENTIFIERS> <PRIMARY_ID>SRS20625763</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098794/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802802" alias="LC1098795"> <IDENTIFIERS> <PRIMARY_ID>SRX23802802</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098795</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625765"> <IDENTIFIERS> <PRIMARY_ID>SRS20625765</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098795/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802803" alias="LC1098796"> <IDENTIFIERS> <PRIMARY_ID>SRX23802803</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098796</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625770"> <IDENTIFIERS> <PRIMARY_ID>SRS20625770</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098796/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802804" alias="LC1098798"> <IDENTIFIERS> <PRIMARY_ID>SRX23802804</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098798</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625766"> <IDENTIFIERS> <PRIMARY_ID>SRS20625766</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098798/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802805" alias="LC1098799"> <IDENTIFIERS> <PRIMARY_ID>SRX23802805</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098799</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625767"> <IDENTIFIERS> <PRIMARY_ID>SRS20625767</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098799/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802806" alias="LC1098800"> <IDENTIFIERS> <PRIMARY_ID>SRX23802806</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098800</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625768"> <IDENTIFIERS> <PRIMARY_ID>SRS20625768</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098800/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802807" alias="LC1098801"> <IDENTIFIERS> <PRIMARY_ID>SRX23802807</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098801</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625769"> <IDENTIFIERS> <PRIMARY_ID>SRS20625769</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098801/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802808" alias="LC1098802"> <IDENTIFIERS> <PRIMARY_ID>SRX23802808</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098802</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625772"> <IDENTIFIERS> <PRIMARY_ID>SRS20625772</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098802/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802809" alias="LC1098807"> <IDENTIFIERS> <PRIMARY_ID>SRX23802809</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098807</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625771"> <IDENTIFIERS> <PRIMARY_ID>SRS20625771</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MA-CDC-LC1098807/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802810" alias="LC1098814"> <IDENTIFIERS> <PRIMARY_ID>SRX23802810</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098814</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625773"> <IDENTIFIERS> <PRIMARY_ID>SRS20625773</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098814/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802811" alias="LC1098818"> <IDENTIFIERS> <PRIMARY_ID>SRX23802811</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098818</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625774"> <IDENTIFIERS> <PRIMARY_ID>SRS20625774</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098818/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802812" alias="LC1098822"> <IDENTIFIERS> <PRIMARY_ID>SRX23802812</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098822</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625777"> <IDENTIFIERS> <PRIMARY_ID>SRS20625777</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098822/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802813" alias="LC1098830"> <IDENTIFIERS> <PRIMARY_ID>SRX23802813</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098830</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625775"> <IDENTIFIERS> <PRIMARY_ID>SRS20625775</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098830/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802814" alias="LC1098832"> <IDENTIFIERS> <PRIMARY_ID>SRX23802814</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098832</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625776"> <IDENTIFIERS> <PRIMARY_ID>SRS20625776</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098832/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802815" alias="LC1098835"> <IDENTIFIERS> <PRIMARY_ID>SRX23802815</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098835</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625778"> <IDENTIFIERS> <PRIMARY_ID>SRS20625778</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098835/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802816" alias="LC1098836"> <IDENTIFIERS> <PRIMARY_ID>SRX23802816</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098836</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625780"> <IDENTIFIERS> <PRIMARY_ID>SRS20625780</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098836/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802817" alias="LC1098837"> <IDENTIFIERS> <PRIMARY_ID>SRX23802817</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098837</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625779"> <IDENTIFIERS> <PRIMARY_ID>SRS20625779</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MA-CDC-LC1098837/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802818" alias="LC1098840"> <IDENTIFIERS> <PRIMARY_ID>SRX23802818</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098840</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625781"> <IDENTIFIERS> <PRIMARY_ID>SRS20625781</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098840/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802819" alias="LC1098841"> <IDENTIFIERS> <PRIMARY_ID>SRX23802819</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098841</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625782"> <IDENTIFIERS> <PRIMARY_ID>SRS20625782</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098841/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802820" alias="LC1097892"> <IDENTIFIERS> <PRIMARY_ID>SRX23802820</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097892</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625783"> <IDENTIFIERS> <PRIMARY_ID>SRS20625783</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097892/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802821" alias="LC1097900"> <IDENTIFIERS> <PRIMARY_ID>SRX23802821</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097900</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625784"> <IDENTIFIERS> <PRIMARY_ID>SRS20625784</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1097900/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802822" alias="LC1097903"> <IDENTIFIERS> <PRIMARY_ID>SRX23802822</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097903</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625785"> <IDENTIFIERS> <PRIMARY_ID>SRS20625785</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1097903/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802823" alias="LC1097906"> <IDENTIFIERS> <PRIMARY_ID>SRX23802823</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097906</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625786"> <IDENTIFIERS> <PRIMARY_ID>SRS20625786</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097906/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802824" alias="LC1097908"> <IDENTIFIERS> <PRIMARY_ID>SRX23802824</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097908</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625787"> <IDENTIFIERS> <PRIMARY_ID>SRS20625787</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097908/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802825" alias="LC1097912"> <IDENTIFIERS> <PRIMARY_ID>SRX23802825</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097912</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625788"> <IDENTIFIERS> <PRIMARY_ID>SRS20625788</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097912/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802826" alias="LC1097915"> <IDENTIFIERS> <PRIMARY_ID>SRX23802826</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097915</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625789"> <IDENTIFIERS> <PRIMARY_ID>SRS20625789</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AL-CDC-LC1097915/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802827" alias="LC1097918"> <IDENTIFIERS> <PRIMARY_ID>SRX23802827</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097918</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625790"> <IDENTIFIERS> <PRIMARY_ID>SRS20625790</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097918/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802828" alias="LC1097919"> <IDENTIFIERS> <PRIMARY_ID>SRX23802828</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097919</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625791"> <IDENTIFIERS> <PRIMARY_ID>SRS20625791</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097919/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802829" alias="LC1097922"> <IDENTIFIERS> <PRIMARY_ID>SRX23802829</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097922</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625792"> <IDENTIFIERS> <PRIMARY_ID>SRS20625792</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1097922/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802830" alias="LC1097925"> <IDENTIFIERS> <PRIMARY_ID>SRX23802830</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097925</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625793"> <IDENTIFIERS> <PRIMARY_ID>SRS20625793</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097925/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802831" alias="LC1097926"> <IDENTIFIERS> <PRIMARY_ID>SRX23802831</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097926</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625794"> <IDENTIFIERS> <PRIMARY_ID>SRS20625794</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097926/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802832" alias="LC1097927"> <IDENTIFIERS> <PRIMARY_ID>SRX23802832</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097927</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625795"> <IDENTIFIERS> <PRIMARY_ID>SRS20625795</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097927/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802833" alias="LC1097935"> <IDENTIFIERS> <PRIMARY_ID>SRX23802833</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097935</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625796"> <IDENTIFIERS> <PRIMARY_ID>SRS20625796</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/WV-CDC-LC1097935/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802834" alias="LC1097936"> <IDENTIFIERS> <PRIMARY_ID>SRX23802834</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097936</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625797"> <IDENTIFIERS> <PRIMARY_ID>SRS20625797</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097936/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802835" alias="LC1097937"> <IDENTIFIERS> <PRIMARY_ID>SRX23802835</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097937</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625798"> <IDENTIFIERS> <PRIMARY_ID>SRS20625798</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1097937/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802836" alias="LC1097939"> <IDENTIFIERS> <PRIMARY_ID>SRX23802836</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097939</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625799"> <IDENTIFIERS> <PRIMARY_ID>SRS20625799</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097939/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802837" alias="LC1097943"> <IDENTIFIERS> <PRIMARY_ID>SRX23802837</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097943</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625800"> <IDENTIFIERS> <PRIMARY_ID>SRS20625800</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097943/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802838" alias="LC1097946"> <IDENTIFIERS> <PRIMARY_ID>SRX23802838</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097946</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625801"> <IDENTIFIERS> <PRIMARY_ID>SRS20625801</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/LA-CDC-LC1097946/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802839" alias="LC1097947"> <IDENTIFIERS> <PRIMARY_ID>SRX23802839</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097947</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625802"> <IDENTIFIERS> <PRIMARY_ID>SRS20625802</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097947/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802840" alias="LC1097952"> <IDENTIFIERS> <PRIMARY_ID>SRX23802840</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097952</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625803"> <IDENTIFIERS> <PRIMARY_ID>SRS20625803</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097952/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802841" alias="LC1097953"> <IDENTIFIERS> <PRIMARY_ID>SRX23802841</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097953</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625804"> <IDENTIFIERS> <PRIMARY_ID>SRS20625804</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MO-CDC-LC1097953/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802842" alias="LC1097957"> <IDENTIFIERS> <PRIMARY_ID>SRX23802842</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097957</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625805"> <IDENTIFIERS> <PRIMARY_ID>SRS20625805</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097957/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802843" alias="LC1097959"> <IDENTIFIERS> <PRIMARY_ID>SRX23802843</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097959</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625807"> <IDENTIFIERS> <PRIMARY_ID>SRS20625807</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1097959/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802844" alias="LC1097960"> <IDENTIFIERS> <PRIMARY_ID>SRX23802844</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097960</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625806"> <IDENTIFIERS> <PRIMARY_ID>SRS20625806</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097960/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802845" alias="LC1097961"> <IDENTIFIERS> <PRIMARY_ID>SRX23802845</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097961</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625808"> <IDENTIFIERS> <PRIMARY_ID>SRS20625808</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097961/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802846" alias="LC1097984"> <IDENTIFIERS> <PRIMARY_ID>SRX23802846</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097984</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625809"> <IDENTIFIERS> <PRIMARY_ID>SRS20625809</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1097984/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802847" alias="LC1097987"> <IDENTIFIERS> <PRIMARY_ID>SRX23802847</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097987</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625810"> <IDENTIFIERS> <PRIMARY_ID>SRS20625810</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097987/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802848" alias="LC1098005"> <IDENTIFIERS> <PRIMARY_ID>SRX23802848</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098005</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625811"> <IDENTIFIERS> <PRIMARY_ID>SRS20625811</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1098005/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802849" alias="LC1098006"> <IDENTIFIERS> <PRIMARY_ID>SRX23802849</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098006</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625812"> <IDENTIFIERS> <PRIMARY_ID>SRS20625812</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1098006/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802850" alias="LC1098007"> <IDENTIFIERS> <PRIMARY_ID>SRX23802850</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098007</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625813"> <IDENTIFIERS> <PRIMARY_ID>SRS20625813</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1098007/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802851" alias="LC1098024"> <IDENTIFIERS> <PRIMARY_ID>SRX23802851</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098024</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625814"> <IDENTIFIERS> <PRIMARY_ID>SRS20625814</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1098024/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802852" alias="LC1098434"> <IDENTIFIERS> <PRIMARY_ID>SRX23802852</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098434</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625815"> <IDENTIFIERS> <PRIMARY_ID>SRS20625815</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098434/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802853" alias="LC1098439"> <IDENTIFIERS> <PRIMARY_ID>SRX23802853</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098439</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625816"> <IDENTIFIERS> <PRIMARY_ID>SRS20625816</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098439/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802854" alias="LC1098440"> <IDENTIFIERS> <PRIMARY_ID>SRX23802854</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098440</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625817"> <IDENTIFIERS> <PRIMARY_ID>SRS20625817</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098440/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802855" alias="LC1098441"> <IDENTIFIERS> <PRIMARY_ID>SRX23802855</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098441</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625818"> <IDENTIFIERS> <PRIMARY_ID>SRS20625818</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098441/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802856" alias="LC1098442"> <IDENTIFIERS> <PRIMARY_ID>SRX23802856</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098442</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625819"> <IDENTIFIERS> <PRIMARY_ID>SRS20625819</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098442/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802857" alias="LC1098444"> <IDENTIFIERS> <PRIMARY_ID>SRX23802857</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098444</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625820"> <IDENTIFIERS> <PRIMARY_ID>SRS20625820</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098444/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802858" alias="LC1098447"> <IDENTIFIERS> <PRIMARY_ID>SRX23802858</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098447</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625821"> <IDENTIFIERS> <PRIMARY_ID>SRS20625821</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098447/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802859" alias="LC1098448"> <IDENTIFIERS> <PRIMARY_ID>SRX23802859</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098448</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625822"> <IDENTIFIERS> <PRIMARY_ID>SRS20625822</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098448/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802860" alias="LC1098450"> <IDENTIFIERS> <PRIMARY_ID>SRX23802860</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098450</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625823"> <IDENTIFIERS> <PRIMARY_ID>SRS20625823</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098450/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802861" alias="LC1098453"> <IDENTIFIERS> <PRIMARY_ID>SRX23802861</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098453</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625824"> <IDENTIFIERS> <PRIMARY_ID>SRS20625824</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098453/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802862" alias="LC1098455"> <IDENTIFIERS> <PRIMARY_ID>SRX23802862</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098455</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625825"> <IDENTIFIERS> <PRIMARY_ID>SRS20625825</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098455/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802863" alias="LC1098457"> <IDENTIFIERS> <PRIMARY_ID>SRX23802863</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098457</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625826"> <IDENTIFIERS> <PRIMARY_ID>SRS20625826</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098457/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802864" alias="LC1098459"> <IDENTIFIERS> <PRIMARY_ID>SRX23802864</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098459</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625827"> <IDENTIFIERS> <PRIMARY_ID>SRS20625827</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098459/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802865" alias="LC1098460"> <IDENTIFIERS> <PRIMARY_ID>SRX23802865</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098460</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625828"> <IDENTIFIERS> <PRIMARY_ID>SRS20625828</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098460/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802866" alias="LC1098461"> <IDENTIFIERS> <PRIMARY_ID>SRX23802866</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098461</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625829"> <IDENTIFIERS> <PRIMARY_ID>SRS20625829</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098461/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802867" alias="LC1098463"> <IDENTIFIERS> <PRIMARY_ID>SRX23802867</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098463</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625830"> <IDENTIFIERS> <PRIMARY_ID>SRS20625830</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098463/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802868" alias="LC1098464"> <IDENTIFIERS> <PRIMARY_ID>SRX23802868</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098464</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625831"> <IDENTIFIERS> <PRIMARY_ID>SRS20625831</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098464/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802869" alias="LC1098465"> <IDENTIFIERS> <PRIMARY_ID>SRX23802869</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098465</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625832"> <IDENTIFIERS> <PRIMARY_ID>SRS20625832</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CT-CDC-LC1098465/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802870" alias="LC1098467"> <IDENTIFIERS> <PRIMARY_ID>SRX23802870</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098467</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625833"> <IDENTIFIERS> <PRIMARY_ID>SRS20625833</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098467/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802871" alias="LC1098468"> <IDENTIFIERS> <PRIMARY_ID>SRX23802871</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098468</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625834"> <IDENTIFIERS> <PRIMARY_ID>SRS20625834</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098468/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802872" alias="LC1098471"> <IDENTIFIERS> <PRIMARY_ID>SRX23802872</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098471</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625836"> <IDENTIFIERS> <PRIMARY_ID>SRS20625836</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098471/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802873" alias="LC1098473"> <IDENTIFIERS> <PRIMARY_ID>SRX23802873</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098473</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625835"> <IDENTIFIERS> <PRIMARY_ID>SRS20625835</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098473/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802874" alias="LC1098474"> <IDENTIFIERS> <PRIMARY_ID>SRX23802874</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098474</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625837"> <IDENTIFIERS> <PRIMARY_ID>SRS20625837</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098474/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802875" alias="LC1098477"> <IDENTIFIERS> <PRIMARY_ID>SRX23802875</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098477</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625838"> <IDENTIFIERS> <PRIMARY_ID>SRS20625838</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098477/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802876" alias="LC1098480"> <IDENTIFIERS> <PRIMARY_ID>SRX23802876</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098480</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625839"> <IDENTIFIERS> <PRIMARY_ID>SRS20625839</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1098480/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802877" alias="LC1098483"> <IDENTIFIERS> <PRIMARY_ID>SRX23802877</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098483</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625840"> <IDENTIFIERS> <PRIMARY_ID>SRS20625840</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1098483/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802878" alias="LC1098497"> <IDENTIFIERS> <PRIMARY_ID>SRX23802878</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098497</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625841"> <IDENTIFIERS> <PRIMARY_ID>SRS20625841</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098497/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802879" alias="LC1098500"> <IDENTIFIERS> <PRIMARY_ID>SRX23802879</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098500</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625842"> <IDENTIFIERS> <PRIMARY_ID>SRS20625842</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098500/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802880" alias="LC1098512"> <IDENTIFIERS> <PRIMARY_ID>SRX23802880</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098512</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625843"> <IDENTIFIERS> <PRIMARY_ID>SRS20625843</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098512/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802881" alias="LC1098516"> <IDENTIFIERS> <PRIMARY_ID>SRX23802881</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098516</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625844"> <IDENTIFIERS> <PRIMARY_ID>SRS20625844</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098516/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802882" alias="LC1098520"> <IDENTIFIERS> <PRIMARY_ID>SRX23802882</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098520</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625845"> <IDENTIFIERS> <PRIMARY_ID>SRS20625845</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098520/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802883" alias="LC1098521"> <IDENTIFIERS> <PRIMARY_ID>SRX23802883</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098521</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625846"> <IDENTIFIERS> <PRIMARY_ID>SRS20625846</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098521/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802884" alias="LC1098842"> <IDENTIFIERS> <PRIMARY_ID>SRX23802884</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098842</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625847"> <IDENTIFIERS> <PRIMARY_ID>SRS20625847</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098842/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802885" alias="LC1098846"> <IDENTIFIERS> <PRIMARY_ID>SRX23802885</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098846</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625848"> <IDENTIFIERS> <PRIMARY_ID>SRS20625848</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098846/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802886" alias="LC1098848"> <IDENTIFIERS> <PRIMARY_ID>SRX23802886</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098848</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625849"> <IDENTIFIERS> <PRIMARY_ID>SRS20625849</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098848/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802887" alias="LC1098852"> <IDENTIFIERS> <PRIMARY_ID>SRX23802887</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098852</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625850"> <IDENTIFIERS> <PRIMARY_ID>SRS20625850</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098852/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802888" alias="LC1098853"> <IDENTIFIERS> <PRIMARY_ID>SRX23802888</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098853</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625852"> <IDENTIFIERS> <PRIMARY_ID>SRS20625852</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098853/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802889" alias="LC1098854"> <IDENTIFIERS> <PRIMARY_ID>SRX23802889</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098854</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625851"> <IDENTIFIERS> <PRIMARY_ID>SRS20625851</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098854/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802890" alias="LC1098855"> <IDENTIFIERS> <PRIMARY_ID>SRX23802890</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098855</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625853"> <IDENTIFIERS> <PRIMARY_ID>SRS20625853</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098855/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802891" alias="LC1098856"> <IDENTIFIERS> <PRIMARY_ID>SRX23802891</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098856</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625855"> <IDENTIFIERS> <PRIMARY_ID>SRS20625855</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098856/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802892" alias="LC1098858"> <IDENTIFIERS> <PRIMARY_ID>SRX23802892</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098858</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625854"> <IDENTIFIERS> <PRIMARY_ID>SRS20625854</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098858/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802893" alias="LC1098860"> <IDENTIFIERS> <PRIMARY_ID>SRX23802893</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098860</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625856"> <IDENTIFIERS> <PRIMARY_ID>SRS20625856</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098860/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802894" alias="LC1098861"> <IDENTIFIERS> <PRIMARY_ID>SRX23802894</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098861</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625857"> <IDENTIFIERS> <PRIMARY_ID>SRS20625857</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098861/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802895" alias="LC1098862"> <IDENTIFIERS> <PRIMARY_ID>SRX23802895</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098862</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625859"> <IDENTIFIERS> <PRIMARY_ID>SRS20625859</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098862/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802896" alias="LC1098863"> <IDENTIFIERS> <PRIMARY_ID>SRX23802896</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098863</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625858"> <IDENTIFIERS> <PRIMARY_ID>SRS20625858</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098863/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802897" alias="LC1098864"> <IDENTIFIERS> <PRIMARY_ID>SRX23802897</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098864</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625861"> <IDENTIFIERS> <PRIMARY_ID>SRS20625861</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098864/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802898" alias="LC1098865"> <IDENTIFIERS> <PRIMARY_ID>SRX23802898</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098865</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625860"> <IDENTIFIERS> <PRIMARY_ID>SRS20625860</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098865/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802899" alias="LC1098870"> <IDENTIFIERS> <PRIMARY_ID>SRX23802899</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098870</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625862"> <IDENTIFIERS> <PRIMARY_ID>SRS20625862</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098870/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802900" alias="LC1098873"> <IDENTIFIERS> <PRIMARY_ID>SRX23802900</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098873</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625863"> <IDENTIFIERS> <PRIMARY_ID>SRS20625863</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098873/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802901" alias="LC1098877"> <IDENTIFIERS> <PRIMARY_ID>SRX23802901</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098877</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625864"> <IDENTIFIERS> <PRIMARY_ID>SRS20625864</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098877/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802902" alias="LC1098890"> <IDENTIFIERS> <PRIMARY_ID>SRX23802902</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098890</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625865"> <IDENTIFIERS> <PRIMARY_ID>SRS20625865</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098890/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802903" alias="LC1098894"> <IDENTIFIERS> <PRIMARY_ID>SRX23802903</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098894</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625866"> <IDENTIFIERS> <PRIMARY_ID>SRS20625866</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098894/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802904" alias="LC1098902"> <IDENTIFIERS> <PRIMARY_ID>SRX23802904</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098902</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625867"> <IDENTIFIERS> <PRIMARY_ID>SRS20625867</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098902/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802905" alias="LC1098905"> <IDENTIFIERS> <PRIMARY_ID>SRX23802905</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098905</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625868"> <IDENTIFIERS> <PRIMARY_ID>SRS20625868</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098905/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802906" alias="LC1098906"> <IDENTIFIERS> <PRIMARY_ID>SRX23802906</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098906</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625869"> <IDENTIFIERS> <PRIMARY_ID>SRS20625869</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098906/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802907" alias="LC1098908"> <IDENTIFIERS> <PRIMARY_ID>SRX23802907</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098908</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625871"> <IDENTIFIERS> <PRIMARY_ID>SRS20625871</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098908/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802908" alias="LC1098912"> <IDENTIFIERS> <PRIMARY_ID>SRX23802908</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098912</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625870"> <IDENTIFIERS> <PRIMARY_ID>SRS20625870</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098912/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802909" alias="LC1098916"> <IDENTIFIERS> <PRIMARY_ID>SRX23802909</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098916</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625872"> <IDENTIFIERS> <PRIMARY_ID>SRS20625872</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098916/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802910" alias="LC1098917"> <IDENTIFIERS> <PRIMARY_ID>SRX23802910</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098917</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625873"> <IDENTIFIERS> <PRIMARY_ID>SRS20625873</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098917/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802911" alias="LC1098918"> <IDENTIFIERS> <PRIMARY_ID>SRX23802911</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098918</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625874"> <IDENTIFIERS> <PRIMARY_ID>SRS20625874</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098918/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802912" alias="LC1098920"> <IDENTIFIERS> <PRIMARY_ID>SRX23802912</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098920</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625875"> <IDENTIFIERS> <PRIMARY_ID>SRS20625875</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098920/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802913" alias="LC1098921"> <IDENTIFIERS> <PRIMARY_ID>SRX23802913</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098921</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625876"> <IDENTIFIERS> <PRIMARY_ID>SRS20625876</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098921/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802914" alias="LC1098922"> <IDENTIFIERS> <PRIMARY_ID>SRX23802914</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098922</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625877"> <IDENTIFIERS> <PRIMARY_ID>SRS20625877</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098922/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802915" alias="LC1098925"> <IDENTIFIERS> <PRIMARY_ID>SRX23802915</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098925</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625878"> <IDENTIFIERS> <PRIMARY_ID>SRS20625878</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098925/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802916" alias="LC1097465"> <IDENTIFIERS> <PRIMARY_ID>SRX23802916</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097465</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625879"> <IDENTIFIERS> <PRIMARY_ID>SRS20625879</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/ND-CDC-LC1097465/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802917" alias="LC1097514"> <IDENTIFIERS> <PRIMARY_ID>SRX23802917</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097514</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625880"> <IDENTIFIERS> <PRIMARY_ID>SRS20625880</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-LC1097514/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802918" alias="LC1097518"> <IDENTIFIERS> <PRIMARY_ID>SRX23802918</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097518</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625881"> <IDENTIFIERS> <PRIMARY_ID>SRS20625881</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-LC1097518/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802919" alias="LC1097526"> <IDENTIFIERS> <PRIMARY_ID>SRX23802919</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097526</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625884"> <IDENTIFIERS> <PRIMARY_ID>SRS20625884</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097526/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802920" alias="LC1098143"> <IDENTIFIERS> <PRIMARY_ID>SRX23802920</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098143</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625883"> <IDENTIFIERS> <PRIMARY_ID>SRS20625883</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MA-CDC-LC1098143/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802921" alias="LC1098144"> <IDENTIFIERS> <PRIMARY_ID>SRX23802921</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098144</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625882"> <IDENTIFIERS> <PRIMARY_ID>SRS20625882</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098144/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802922" alias="LC1098145"> <IDENTIFIERS> <PRIMARY_ID>SRX23802922</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098145</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625886"> <IDENTIFIERS> <PRIMARY_ID>SRS20625886</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098145/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802923" alias="LC1098147"> <IDENTIFIERS> <PRIMARY_ID>SRX23802923</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098147</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625885"> <IDENTIFIERS> <PRIMARY_ID>SRS20625885</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098147/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802924" alias="LC1098150"> <IDENTIFIERS> <PRIMARY_ID>SRX23802924</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098150</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625887"> <IDENTIFIERS> <PRIMARY_ID>SRS20625887</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098150/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802925" alias="LC1098154"> <IDENTIFIERS> <PRIMARY_ID>SRX23802925</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098154</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625888"> <IDENTIFIERS> <PRIMARY_ID>SRS20625888</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098154/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802926" alias="LC1098155"> <IDENTIFIERS> <PRIMARY_ID>SRX23802926</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098155</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625889"> <IDENTIFIERS> <PRIMARY_ID>SRS20625889</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098155/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802927" alias="LC1098158"> <IDENTIFIERS> <PRIMARY_ID>SRX23802927</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098158</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625890"> <IDENTIFIERS> <PRIMARY_ID>SRS20625890</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098158/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802928" alias="LC1098159"> <IDENTIFIERS> <PRIMARY_ID>SRX23802928</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098159</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625891"> <IDENTIFIERS> <PRIMARY_ID>SRS20625891</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098159/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802929" alias="LC1098160"> <IDENTIFIERS> <PRIMARY_ID>SRX23802929</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098160</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625892"> <IDENTIFIERS> <PRIMARY_ID>SRS20625892</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098160/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802930" alias="LC1098162"> <IDENTIFIERS> <PRIMARY_ID>SRX23802930</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098162</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625893"> <IDENTIFIERS> <PRIMARY_ID>SRS20625893</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098162/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802931" alias="LC1098163"> <IDENTIFIERS> <PRIMARY_ID>SRX23802931</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098163</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625894"> <IDENTIFIERS> <PRIMARY_ID>SRS20625894</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098163/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802932" alias="LC1098169"> <IDENTIFIERS> <PRIMARY_ID>SRX23802932</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098169</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625896"> <IDENTIFIERS> <PRIMARY_ID>SRS20625896</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098169/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802933" alias="LC1098170"> <IDENTIFIERS> <PRIMARY_ID>SRX23802933</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098170</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625895"> <IDENTIFIERS> <PRIMARY_ID>SRS20625895</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098170/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802934" alias="LC1098172"> <IDENTIFIERS> <PRIMARY_ID>SRX23802934</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098172</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625897"> <IDENTIFIERS> <PRIMARY_ID>SRS20625897</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098172/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802935" alias="LC1098173"> <IDENTIFIERS> <PRIMARY_ID>SRX23802935</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098173</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625898"> <IDENTIFIERS> <PRIMARY_ID>SRS20625898</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098173/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802936" alias="LC1098174"> <IDENTIFIERS> <PRIMARY_ID>SRX23802936</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098174</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625900"> <IDENTIFIERS> <PRIMARY_ID>SRS20625900</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098174/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802937" alias="LC1098179"> <IDENTIFIERS> <PRIMARY_ID>SRX23802937</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098179</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625899"> <IDENTIFIERS> <PRIMARY_ID>SRS20625899</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098179/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802938" alias="LC1098184"> <IDENTIFIERS> <PRIMARY_ID>SRX23802938</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098184</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625901"> <IDENTIFIERS> <PRIMARY_ID>SRS20625901</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098184/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802939" alias="LC1098186"> <IDENTIFIERS> <PRIMARY_ID>SRX23802939</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098186</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625902"> <IDENTIFIERS> <PRIMARY_ID>SRS20625902</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098186/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802940" alias="LC1098189"> <IDENTIFIERS> <PRIMARY_ID>SRX23802940</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098189</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625903"> <IDENTIFIERS> <PRIMARY_ID>SRS20625903</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098189/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802941" alias="LC1098191"> <IDENTIFIERS> <PRIMARY_ID>SRX23802941</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098191</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625904"> <IDENTIFIERS> <PRIMARY_ID>SRS20625904</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098191/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802942" alias="LC1098192"> <IDENTIFIERS> <PRIMARY_ID>SRX23802942</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098192</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625905"> <IDENTIFIERS> <PRIMARY_ID>SRS20625905</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098192/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802943" alias="LC1098193"> <IDENTIFIERS> <PRIMARY_ID>SRX23802943</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098193</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625906"> <IDENTIFIERS> <PRIMARY_ID>SRS20625906</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098193/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802944" alias="LC1098198"> <IDENTIFIERS> <PRIMARY_ID>SRX23802944</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098198</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625907"> <IDENTIFIERS> <PRIMARY_ID>SRS20625907</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098198/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802945" alias="LC1098199"> <IDENTIFIERS> <PRIMARY_ID>SRX23802945</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098199</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625908"> <IDENTIFIERS> <PRIMARY_ID>SRS20625908</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098199/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802946" alias="LC1098200"> <IDENTIFIERS> <PRIMARY_ID>SRX23802946</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098200</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625909"> <IDENTIFIERS> <PRIMARY_ID>SRS20625909</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098200/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802947" alias="LC1098201"> <IDENTIFIERS> <PRIMARY_ID>SRX23802947</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098201</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625910"> <IDENTIFIERS> <PRIMARY_ID>SRS20625910</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098201/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802948" alias="LC1098202"> <IDENTIFIERS> <PRIMARY_ID>SRX23802948</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098202</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625911"> <IDENTIFIERS> <PRIMARY_ID>SRS20625911</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098202/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802949" alias="LC1098203"> <IDENTIFIERS> <PRIMARY_ID>SRX23802949</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098203</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625912"> <IDENTIFIERS> <PRIMARY_ID>SRS20625912</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098203/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802950" alias="LC1098204"> <IDENTIFIERS> <PRIMARY_ID>SRX23802950</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098204</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625913"> <IDENTIFIERS> <PRIMARY_ID>SRS20625913</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098204/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802951" alias="LC1098205"> <IDENTIFIERS> <PRIMARY_ID>SRX23802951</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098205</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625915"> <IDENTIFIERS> <PRIMARY_ID>SRS20625915</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098205/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802952" alias="LC1098524"> <IDENTIFIERS> <PRIMARY_ID>SRX23802952</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098524</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625914"> <IDENTIFIERS> <PRIMARY_ID>SRS20625914</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098524/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802953" alias="LC1098526"> <IDENTIFIERS> <PRIMARY_ID>SRX23802953</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098526</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625916"> <IDENTIFIERS> <PRIMARY_ID>SRS20625916</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098526/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802954" alias="LC1098529"> <IDENTIFIERS> <PRIMARY_ID>SRX23802954</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098529</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625917"> <IDENTIFIERS> <PRIMARY_ID>SRS20625917</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098529/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802955" alias="LC1098531"> <IDENTIFIERS> <PRIMARY_ID>SRX23802955</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098531</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625918"> <IDENTIFIERS> <PRIMARY_ID>SRS20625918</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098531/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802956" alias="LC1098532"> <IDENTIFIERS> <PRIMARY_ID>SRX23802956</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098532</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625919"> <IDENTIFIERS> <PRIMARY_ID>SRS20625919</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098532/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802957" alias="LC1098582"> <IDENTIFIERS> <PRIMARY_ID>SRX23802957</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098582</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625920"> <IDENTIFIERS> <PRIMARY_ID>SRS20625920</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098582/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802958" alias="LC1098583"> <IDENTIFIERS> <PRIMARY_ID>SRX23802958</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098583</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625921"> <IDENTIFIERS> <PRIMARY_ID>SRS20625921</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098583/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802959" alias="LC1098591"> <IDENTIFIERS> <PRIMARY_ID>SRX23802959</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098591</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625922"> <IDENTIFIERS> <PRIMARY_ID>SRS20625922</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098591/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802960" alias="LC1098592"> <IDENTIFIERS> <PRIMARY_ID>SRX23802960</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098592</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625923"> <IDENTIFIERS> <PRIMARY_ID>SRS20625923</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098592/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802961" alias="LC1098593"> <IDENTIFIERS> <PRIMARY_ID>SRX23802961</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098593</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625924"> <IDENTIFIERS> <PRIMARY_ID>SRS20625924</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098593/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802962" alias="LC1098595"> <IDENTIFIERS> <PRIMARY_ID>SRX23802962</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098595</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625925"> <IDENTIFIERS> <PRIMARY_ID>SRS20625925</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098595/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802963" alias="LC1098596"> <IDENTIFIERS> <PRIMARY_ID>SRX23802963</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098596</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625926"> <IDENTIFIERS> <PRIMARY_ID>SRS20625926</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098596/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802964" alias="LC1098598"> <IDENTIFIERS> <PRIMARY_ID>SRX23802964</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098598</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625927"> <IDENTIFIERS> <PRIMARY_ID>SRS20625927</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098598/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802965" alias="LC1098602"> <IDENTIFIERS> <PRIMARY_ID>SRX23802965</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098602</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625928"> <IDENTIFIERS> <PRIMARY_ID>SRS20625928</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098602/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802966" alias="LC1098603"> <IDENTIFIERS> <PRIMARY_ID>SRX23802966</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098603</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625929"> <IDENTIFIERS> <PRIMARY_ID>SRS20625929</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098603/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802967" alias="LC1098604"> <IDENTIFIERS> <PRIMARY_ID>SRX23802967</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098604</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625930"> <IDENTIFIERS> <PRIMARY_ID>SRS20625930</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098604/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802968" alias="LC1098606"> <IDENTIFIERS> <PRIMARY_ID>SRX23802968</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098606</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625931"> <IDENTIFIERS> <PRIMARY_ID>SRS20625931</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098606/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802969" alias="LC1098610"> <IDENTIFIERS> <PRIMARY_ID>SRX23802969</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098610</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625932"> <IDENTIFIERS> <PRIMARY_ID>SRS20625932</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098610/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802970" alias="LC1098612"> <IDENTIFIERS> <PRIMARY_ID>SRX23802970</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098612</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625934"> <IDENTIFIERS> <PRIMARY_ID>SRS20625934</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098612/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802971" alias="LC1098616"> <IDENTIFIERS> <PRIMARY_ID>SRX23802971</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098616</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625935"> <IDENTIFIERS> <PRIMARY_ID>SRS20625935</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098616/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802972" alias="LC1098617"> <IDENTIFIERS> <PRIMARY_ID>SRX23802972</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098617</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625933"> <IDENTIFIERS> <PRIMARY_ID>SRS20625933</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098617/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802973" alias="LC1098618"> <IDENTIFIERS> <PRIMARY_ID>SRX23802973</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098618</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625937"> <IDENTIFIERS> <PRIMARY_ID>SRS20625937</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098618/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802974" alias="LC1098620"> <IDENTIFIERS> <PRIMARY_ID>SRX23802974</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098620</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625936"> <IDENTIFIERS> <PRIMARY_ID>SRS20625936</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098620/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802975" alias="LC1098624"> <IDENTIFIERS> <PRIMARY_ID>SRX23802975</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098624</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625938"> <IDENTIFIERS> <PRIMARY_ID>SRS20625938</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098624/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802976" alias="LC1098625"> <IDENTIFIERS> <PRIMARY_ID>SRX23802976</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098625</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625939"> <IDENTIFIERS> <PRIMARY_ID>SRS20625939</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098625/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802977" alias="LC1098626"> <IDENTIFIERS> <PRIMARY_ID>SRX23802977</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098626</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625940"> <IDENTIFIERS> <PRIMARY_ID>SRS20625940</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098626/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802978" alias="LC1098629"> <IDENTIFIERS> <PRIMARY_ID>SRX23802978</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098629</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625941"> <IDENTIFIERS> <PRIMARY_ID>SRS20625941</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098629/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802979" alias="LC1098634"> <IDENTIFIERS> <PRIMARY_ID>SRX23802979</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098634</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625942"> <IDENTIFIERS> <PRIMARY_ID>SRS20625942</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098634/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802980" alias="LC1098641"> <IDENTIFIERS> <PRIMARY_ID>SRX23802980</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098641</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625944"> <IDENTIFIERS> <PRIMARY_ID>SRS20625944</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098641/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802981" alias="LC1098650"> <IDENTIFIERS> <PRIMARY_ID>SRX23802981</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098650</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625943"> <IDENTIFIERS> <PRIMARY_ID>SRS20625943</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098650/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802982" alias="LC1098655"> <IDENTIFIERS> <PRIMARY_ID>SRX23802982</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098655</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625946"> <IDENTIFIERS> <PRIMARY_ID>SRS20625946</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098655/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802983" alias="LC1098656"> <IDENTIFIERS> <PRIMARY_ID>SRX23802983</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098656</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625945"> <IDENTIFIERS> <PRIMARY_ID>SRS20625945</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098656/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802984" alias="LC1098930"> <IDENTIFIERS> <PRIMARY_ID>SRX23802984</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098930</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625947"> <IDENTIFIERS> <PRIMARY_ID>SRS20625947</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098930/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802985" alias="LC1098935"> <IDENTIFIERS> <PRIMARY_ID>SRX23802985</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098935</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625948"> <IDENTIFIERS> <PRIMARY_ID>SRS20625948</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098935/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802986" alias="LC1098937"> <IDENTIFIERS> <PRIMARY_ID>SRX23802986</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098937</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625949"> <IDENTIFIERS> <PRIMARY_ID>SRS20625949</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098937/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802987" alias="LC1098938"> <IDENTIFIERS> <PRIMARY_ID>SRX23802987</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098938</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625950"> <IDENTIFIERS> <PRIMARY_ID>SRS20625950</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098938/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802988" alias="LC1098941"> <IDENTIFIERS> <PRIMARY_ID>SRX23802988</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098941</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625951"> <IDENTIFIERS> <PRIMARY_ID>SRS20625951</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098941/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802989" alias="LC1098944"> <IDENTIFIERS> <PRIMARY_ID>SRX23802989</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098944</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625952"> <IDENTIFIERS> <PRIMARY_ID>SRS20625952</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098944/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802990" alias="LC1098947"> <IDENTIFIERS> <PRIMARY_ID>SRX23802990</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098947</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625955"> <IDENTIFIERS> <PRIMARY_ID>SRS20625955</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098947/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802991" alias="LC1098948"> <IDENTIFIERS> <PRIMARY_ID>SRX23802991</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098948</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625953"> <IDENTIFIERS> <PRIMARY_ID>SRS20625953</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098948/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802992" alias="LC1098950"> <IDENTIFIERS> <PRIMARY_ID>SRX23802992</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098950</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625954"> <IDENTIFIERS> <PRIMARY_ID>SRS20625954</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098950/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802993" alias="LC1098952"> <IDENTIFIERS> <PRIMARY_ID>SRX23802993</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098952</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625956"> <IDENTIFIERS> <PRIMARY_ID>SRS20625956</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098952/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802994" alias="LC1098956"> <IDENTIFIERS> <PRIMARY_ID>SRX23802994</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098956</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625957"> <IDENTIFIERS> <PRIMARY_ID>SRS20625957</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098956/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802995" alias="LC1098957"> <IDENTIFIERS> <PRIMARY_ID>SRX23802995</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098957</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625958"> <IDENTIFIERS> <PRIMARY_ID>SRS20625958</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098957/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802996" alias="LC1098958"> <IDENTIFIERS> <PRIMARY_ID>SRX23802996</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098958</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625959"> <IDENTIFIERS> <PRIMARY_ID>SRS20625959</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098958/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802997" alias="LC1098959"> <IDENTIFIERS> <PRIMARY_ID>SRX23802997</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098959</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625960"> <IDENTIFIERS> <PRIMARY_ID>SRS20625960</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098959/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802998" alias="LC1098966"> <IDENTIFIERS> <PRIMARY_ID>SRX23802998</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098966</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625961"> <IDENTIFIERS> <PRIMARY_ID>SRS20625961</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098966/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23802999" alias="LC1098967"> <IDENTIFIERS> <PRIMARY_ID>SRX23802999</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098967</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625962"> <IDENTIFIERS> <PRIMARY_ID>SRS20625962</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098967/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803000" alias="LC1098969"> <IDENTIFIERS> <PRIMARY_ID>SRX23803000</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098969</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625963"> <IDENTIFIERS> <PRIMARY_ID>SRS20625963</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098969/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803001" alias="LC1098970"> <IDENTIFIERS> <PRIMARY_ID>SRX23803001</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098970</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625964"> <IDENTIFIERS> <PRIMARY_ID>SRS20625964</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098970/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803002" alias="LC1098977"> <IDENTIFIERS> <PRIMARY_ID>SRX23803002</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098977</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625965"> <IDENTIFIERS> <PRIMARY_ID>SRS20625965</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098977/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803003" alias="LC1098980"> <IDENTIFIERS> <PRIMARY_ID>SRX23803003</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098980</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625966"> <IDENTIFIERS> <PRIMARY_ID>SRS20625966</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098980/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803004" alias="LC1098987"> <IDENTIFIERS> <PRIMARY_ID>SRX23803004</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098987</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625967"> <IDENTIFIERS> <PRIMARY_ID>SRS20625967</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098987/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803005" alias="LC1098990"> <IDENTIFIERS> <PRIMARY_ID>SRX23803005</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098990</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625968"> <IDENTIFIERS> <PRIMARY_ID>SRS20625968</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098990/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803006" alias="LC1098991"> <IDENTIFIERS> <PRIMARY_ID>SRX23803006</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098991</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625969"> <IDENTIFIERS> <PRIMARY_ID>SRS20625969</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098991/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803007" alias="LC1098992"> <IDENTIFIERS> <PRIMARY_ID>SRX23803007</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098992</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625970"> <IDENTIFIERS> <PRIMARY_ID>SRS20625970</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098992/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803008" alias="LC1098993"> <IDENTIFIERS> <PRIMARY_ID>SRX23803008</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098993</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625971"> <IDENTIFIERS> <PRIMARY_ID>SRS20625971</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098993/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803009" alias="LC1098995"> <IDENTIFIERS> <PRIMARY_ID>SRX23803009</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098995</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625972"> <IDENTIFIERS> <PRIMARY_ID>SRS20625972</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098995/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803010" alias="LC1098996"> <IDENTIFIERS> <PRIMARY_ID>SRX23803010</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098996</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625973"> <IDENTIFIERS> <PRIMARY_ID>SRS20625973</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098996/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803011" alias="LC1098997"> <IDENTIFIERS> <PRIMARY_ID>SRX23803011</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098997</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625974"> <IDENTIFIERS> <PRIMARY_ID>SRS20625974</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098997/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803012" alias="LC1098999"> <IDENTIFIERS> <PRIMARY_ID>SRX23803012</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098999</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625975"> <IDENTIFIERS> <PRIMARY_ID>SRS20625975</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AZ-CDC-LC1098999/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803013" alias="LC1099001"> <IDENTIFIERS> <PRIMARY_ID>SRX23803013</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099001</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625976"> <IDENTIFIERS> <PRIMARY_ID>SRS20625976</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1099001/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803014" alias="LC1099005"> <IDENTIFIERS> <PRIMARY_ID>SRX23803014</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099005</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625977"> <IDENTIFIERS> <PRIMARY_ID>SRS20625977</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1099005/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803015" alias="LC1099006"> <IDENTIFIERS> <PRIMARY_ID>SRX23803015</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099006</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625980"> <IDENTIFIERS> <PRIMARY_ID>SRS20625980</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1099006/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803016" alias="LC1097527"> <IDENTIFIERS> <PRIMARY_ID>SRX23803016</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097527</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625978"> <IDENTIFIERS> <PRIMARY_ID>SRS20625978</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-LC1097527/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803017" alias="LC1097546"> <IDENTIFIERS> <PRIMARY_ID>SRX23803017</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097546</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625979"> <IDENTIFIERS> <PRIMARY_ID>SRS20625979</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097546/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803018" alias="LC1097548"> <IDENTIFIERS> <PRIMARY_ID>SRX23803018</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097548</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625981"> <IDENTIFIERS> <PRIMARY_ID>SRS20625981</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097548/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803019" alias="LC1097549"> <IDENTIFIERS> <PRIMARY_ID>SRX23803019</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097549</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625982"> <IDENTIFIERS> <PRIMARY_ID>SRS20625982</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-LC1097549/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803020" alias="LC1097551"> <IDENTIFIERS> <PRIMARY_ID>SRX23803020</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097551</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625983"> <IDENTIFIERS> <PRIMARY_ID>SRS20625983</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097551/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803021" alias="LC1097555"> <IDENTIFIERS> <PRIMARY_ID>SRX23803021</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097555</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625985"> <IDENTIFIERS> <PRIMARY_ID>SRS20625985</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097555/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803022" alias="LC1097565"> <IDENTIFIERS> <PRIMARY_ID>SRX23803022</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097565</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625984"> <IDENTIFIERS> <PRIMARY_ID>SRS20625984</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097565/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803023" alias="LC1097571"> <IDENTIFIERS> <PRIMARY_ID>SRX23803023</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097571</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625986"> <IDENTIFIERS> <PRIMARY_ID>SRS20625986</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097571/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803024" alias="LC1097572"> <IDENTIFIERS> <PRIMARY_ID>SRX23803024</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097572</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625987"> <IDENTIFIERS> <PRIMARY_ID>SRS20625987</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097572/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803025" alias="LC1097573"> <IDENTIFIERS> <PRIMARY_ID>SRX23803025</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097573</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625988"> <IDENTIFIERS> <PRIMARY_ID>SRS20625988</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1097573/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803026" alias="LC1097574"> <IDENTIFIERS> <PRIMARY_ID>SRX23803026</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097574</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625989"> <IDENTIFIERS> <PRIMARY_ID>SRS20625989</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097574/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803027" alias="LC1097576"> <IDENTIFIERS> <PRIMARY_ID>SRX23803027</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097576</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625990"> <IDENTIFIERS> <PRIMARY_ID>SRS20625990</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097576/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803028" alias="LC1097587"> <IDENTIFIERS> <PRIMARY_ID>SRX23803028</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097587</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625991"> <IDENTIFIERS> <PRIMARY_ID>SRS20625991</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1097587/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803029" alias="LC1097589"> <IDENTIFIERS> <PRIMARY_ID>SRX23803029</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097589</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625992"> <IDENTIFIERS> <PRIMARY_ID>SRS20625992</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AZ-CDC-LC1097589/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803030" alias="LC1097590"> <IDENTIFIERS> <PRIMARY_ID>SRX23803030</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097590</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625993"> <IDENTIFIERS> <PRIMARY_ID>SRS20625993</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AZ-CDC-LC1097590/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803031" alias="LC1097591"> <IDENTIFIERS> <PRIMARY_ID>SRX23803031</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097591</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625994"> <IDENTIFIERS> <PRIMARY_ID>SRS20625994</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AZ-CDC-LC1097591/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803032" alias="LC1097595"> <IDENTIFIERS> <PRIMARY_ID>SRX23803032</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097595</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625995"> <IDENTIFIERS> <PRIMARY_ID>SRS20625995</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097595/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803033" alias="LC1097596"> <IDENTIFIERS> <PRIMARY_ID>SRX23803033</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097596</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625996"> <IDENTIFIERS> <PRIMARY_ID>SRS20625996</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097596/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803034" alias="LC1097597"> <IDENTIFIERS> <PRIMARY_ID>SRX23803034</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097597</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625997"> <IDENTIFIERS> <PRIMARY_ID>SRS20625997</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AR-CDC-LC1097597/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803035" alias="LC1097599"> <IDENTIFIERS> <PRIMARY_ID>SRX23803035</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097599</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625998"> <IDENTIFIERS> <PRIMARY_ID>SRS20625998</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AZ-CDC-LC1097599/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803036" alias="LC1097600"> <IDENTIFIERS> <PRIMARY_ID>SRX23803036</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097600</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20625999"> <IDENTIFIERS> <PRIMARY_ID>SRS20625999</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AZ-CDC-LC1097600/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803037" alias="LC1097603"> <IDENTIFIERS> <PRIMARY_ID>SRX23803037</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097603</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626000"> <IDENTIFIERS> <PRIMARY_ID>SRS20626000</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097603/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803038" alias="LC1097604"> <IDENTIFIERS> <PRIMARY_ID>SRX23803038</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097604</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626001"> <IDENTIFIERS> <PRIMARY_ID>SRS20626001</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MO-CDC-LC1097604/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803039" alias="LC1097605"> <IDENTIFIERS> <PRIMARY_ID>SRX23803039</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097605</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626002"> <IDENTIFIERS> <PRIMARY_ID>SRS20626002</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/WA-CDC-LC1097605/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803040" alias="LC1097614"> <IDENTIFIERS> <PRIMARY_ID>SRX23803040</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097614</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626004"> <IDENTIFIERS> <PRIMARY_ID>SRS20626004</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097614/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803041" alias="LC1097615"> <IDENTIFIERS> <PRIMARY_ID>SRX23803041</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097615</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626003"> <IDENTIFIERS> <PRIMARY_ID>SRS20626003</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097615/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803042" alias="LC1097616"> <IDENTIFIERS> <PRIMARY_ID>SRX23803042</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097616</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626005"> <IDENTIFIERS> <PRIMARY_ID>SRS20626005</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097616/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803043" alias="LC1097618"> <IDENTIFIERS> <PRIMARY_ID>SRX23803043</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097618</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626006"> <IDENTIFIERS> <PRIMARY_ID>SRS20626006</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-LC1097618/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803044" alias="LC1097621"> <IDENTIFIERS> <PRIMARY_ID>SRX23803044</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097621</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626007"> <IDENTIFIERS> <PRIMARY_ID>SRS20626007</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-LC1097621/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803045" alias="LC1097622"> <IDENTIFIERS> <PRIMARY_ID>SRX23803045</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097622</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626008"> <IDENTIFIERS> <PRIMARY_ID>SRS20626008</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-LC1097622/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803046" alias="LC1097637"> <IDENTIFIERS> <PRIMARY_ID>SRX23803046</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097637</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626009"> <IDENTIFIERS> <PRIMARY_ID>SRS20626009</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097637/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803047" alias="LC1097638"> <IDENTIFIERS> <PRIMARY_ID>SRX23803047</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097638</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626010"> <IDENTIFIERS> <PRIMARY_ID>SRS20626010</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1097638/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803048" alias="LC1098025"> <IDENTIFIERS> <PRIMARY_ID>SRX23803048</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098025</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626011"> <IDENTIFIERS> <PRIMARY_ID>SRS20626011</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1098025/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803049" alias="LC1098032"> <IDENTIFIERS> <PRIMARY_ID>SRX23803049</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098032</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626012"> <IDENTIFIERS> <PRIMARY_ID>SRS20626012</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098032/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803050" alias="LC1098034"> <IDENTIFIERS> <PRIMARY_ID>SRX23803050</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098034</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626014"> <IDENTIFIERS> <PRIMARY_ID>SRS20626014</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098034/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803051" alias="LC1098035"> <IDENTIFIERS> <PRIMARY_ID>SRX23803051</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098035</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626013"> <IDENTIFIERS> <PRIMARY_ID>SRS20626013</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098035/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803052" alias="LC1098043"> <IDENTIFIERS> <PRIMARY_ID>SRX23803052</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098043</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626016"> <IDENTIFIERS> <PRIMARY_ID>SRS20626016</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098043/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803053" alias="LC1098058"> <IDENTIFIERS> <PRIMARY_ID>SRX23803053</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098058</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626015"> <IDENTIFIERS> <PRIMARY_ID>SRS20626015</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1098058/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803054" alias="LC1098064"> <IDENTIFIERS> <PRIMARY_ID>SRX23803054</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098064</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626017"> <IDENTIFIERS> <PRIMARY_ID>SRS20626017</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1098064/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803055" alias="LC1098088"> <IDENTIFIERS> <PRIMARY_ID>SRX23803055</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098088</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626020"> <IDENTIFIERS> <PRIMARY_ID>SRS20626020</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098088/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803056" alias="LC1098089"> <IDENTIFIERS> <PRIMARY_ID>SRX23803056</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098089</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626019"> <IDENTIFIERS> <PRIMARY_ID>SRS20626019</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098089/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803057" alias="LC1098092"> <IDENTIFIERS> <PRIMARY_ID>SRX23803057</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098092</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626018"> <IDENTIFIERS> <PRIMARY_ID>SRS20626018</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098092/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803058" alias="LC1098098"> <IDENTIFIERS> <PRIMARY_ID>SRX23803058</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098098</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626021"> <IDENTIFIERS> <PRIMARY_ID>SRS20626021</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098098/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803059" alias="LC1098100"> <IDENTIFIERS> <PRIMARY_ID>SRX23803059</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098100</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626022"> <IDENTIFIERS> <PRIMARY_ID>SRS20626022</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1098100/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803060" alias="LC1098102"> <IDENTIFIERS> <PRIMARY_ID>SRX23803060</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098102</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626023"> <IDENTIFIERS> <PRIMARY_ID>SRS20626023</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098102/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803061" alias="LC1098103"> <IDENTIFIERS> <PRIMARY_ID>SRX23803061</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098103</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626024"> <IDENTIFIERS> <PRIMARY_ID>SRS20626024</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098103/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803062" alias="LC1098106"> <IDENTIFIERS> <PRIMARY_ID>SRX23803062</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098106</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626025"> <IDENTIFIERS> <PRIMARY_ID>SRS20626025</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1098106/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803063" alias="LC1098109"> <IDENTIFIERS> <PRIMARY_ID>SRX23803063</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098109</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626026"> <IDENTIFIERS> <PRIMARY_ID>SRS20626026</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098109/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803064" alias="LC1098110"> <IDENTIFIERS> <PRIMARY_ID>SRX23803064</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098110</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626027"> <IDENTIFIERS> <PRIMARY_ID>SRS20626027</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098110/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803065" alias="LC1098114"> <IDENTIFIERS> <PRIMARY_ID>SRX23803065</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098114</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626028"> <IDENTIFIERS> <PRIMARY_ID>SRS20626028</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098114/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803066" alias="LC1098115"> <IDENTIFIERS> <PRIMARY_ID>SRX23803066</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098115</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626029"> <IDENTIFIERS> <PRIMARY_ID>SRS20626029</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098115/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803067" alias="LC1098116"> <IDENTIFIERS> <PRIMARY_ID>SRX23803067</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098116</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626031"> <IDENTIFIERS> <PRIMARY_ID>SRS20626031</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1098116/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803068" alias="LC1098120"> <IDENTIFIERS> <PRIMARY_ID>SRX23803068</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098120</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626030"> <IDENTIFIERS> <PRIMARY_ID>SRS20626030</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IN-CDC-LC1098120/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803069" alias="LC1098121"> <IDENTIFIERS> <PRIMARY_ID>SRX23803069</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098121</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626032"> <IDENTIFIERS> <PRIMARY_ID>SRS20626032</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1098121/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803070" alias="LC1098122"> <IDENTIFIERS> <PRIMARY_ID>SRX23803070</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098122</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626033"> <IDENTIFIERS> <PRIMARY_ID>SRS20626033</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MI-CDC-LC1098122/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803071" alias="LC1098125"> <IDENTIFIERS> <PRIMARY_ID>SRX23803071</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098125</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626034"> <IDENTIFIERS> <PRIMARY_ID>SRS20626034</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/OH-CDC-LC1098125/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803072" alias="LC1098127"> <IDENTIFIERS> <PRIMARY_ID>SRX23803072</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098127</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626035"> <IDENTIFIERS> <PRIMARY_ID>SRS20626035</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098127/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803073" alias="LC1098129"> <IDENTIFIERS> <PRIMARY_ID>SRX23803073</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098129</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626037"> <IDENTIFIERS> <PRIMARY_ID>SRS20626037</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098129/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803074" alias="LC1098130"> <IDENTIFIERS> <PRIMARY_ID>SRX23803074</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098130</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626036"> <IDENTIFIERS> <PRIMARY_ID>SRS20626036</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098130/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803075" alias="LC1098132"> <IDENTIFIERS> <PRIMARY_ID>SRX23803075</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098132</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626038"> <IDENTIFIERS> <PRIMARY_ID>SRS20626038</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098132/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803076" alias="LC1098134"> <IDENTIFIERS> <PRIMARY_ID>SRX23803076</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098134</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626039"> <IDENTIFIERS> <PRIMARY_ID>SRS20626039</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098134/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803077" alias="LC1098135"> <IDENTIFIERS> <PRIMARY_ID>SRX23803077</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098135</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626040"> <IDENTIFIERS> <PRIMARY_ID>SRS20626040</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098135/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803078" alias="LC1098138"> <IDENTIFIERS> <PRIMARY_ID>SRX23803078</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098138</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626041"> <IDENTIFIERS> <PRIMARY_ID>SRS20626041</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098138/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803079" alias="LC1098139"> <IDENTIFIERS> <PRIMARY_ID>SRX23803079</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098139</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626042"> <IDENTIFIERS> <PRIMARY_ID>SRS20626042</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098139/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803080" alias="LC1098206"> <IDENTIFIERS> <PRIMARY_ID>SRX23803080</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098206</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626044"> <IDENTIFIERS> <PRIMARY_ID>SRS20626044</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098206/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803081" alias="LC1098207"> <IDENTIFIERS> <PRIMARY_ID>SRX23803081</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098207</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626043"> <IDENTIFIERS> <PRIMARY_ID>SRS20626043</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098207/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803082" alias="LC1098211"> <IDENTIFIERS> <PRIMARY_ID>SRX23803082</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098211</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626045"> <IDENTIFIERS> <PRIMARY_ID>SRS20626045</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098211/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803083" alias="LC1098212"> <IDENTIFIERS> <PRIMARY_ID>SRX23803083</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098212</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626046"> <IDENTIFIERS> <PRIMARY_ID>SRS20626046</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098212/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803084" alias="LC1098217"> <IDENTIFIERS> <PRIMARY_ID>SRX23803084</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098217</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626047"> <IDENTIFIERS> <PRIMARY_ID>SRS20626047</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098217/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803085" alias="LC1098224"> <IDENTIFIERS> <PRIMARY_ID>SRX23803085</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098224</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626048"> <IDENTIFIERS> <PRIMARY_ID>SRS20626048</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1098224/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803086" alias="LC1098226"> <IDENTIFIERS> <PRIMARY_ID>SRX23803086</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098226</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626049"> <IDENTIFIERS> <PRIMARY_ID>SRS20626049</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AZ-CDC-LC1098226/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803087" alias="LC1098227"> <IDENTIFIERS> <PRIMARY_ID>SRX23803087</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098227</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626050"> <IDENTIFIERS> <PRIMARY_ID>SRS20626050</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AZ-CDC-LC1098227/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803088" alias="LC1098231"> <IDENTIFIERS> <PRIMARY_ID>SRX23803088</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098231</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626051"> <IDENTIFIERS> <PRIMARY_ID>SRS20626051</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1098231/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803089" alias="LC1098232"> <IDENTIFIERS> <PRIMARY_ID>SRX23803089</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098232</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626052"> <IDENTIFIERS> <PRIMARY_ID>SRS20626052</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1098232/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803090" alias="LC1098242"> <IDENTIFIERS> <PRIMARY_ID>SRX23803090</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098242</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626053"> <IDENTIFIERS> <PRIMARY_ID>SRS20626053</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1098242/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803091" alias="LC1098243"> <IDENTIFIERS> <PRIMARY_ID>SRX23803091</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098243</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626054"> <IDENTIFIERS> <PRIMARY_ID>SRS20626054</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-LC1098243/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803092" alias="LC1098259"> <IDENTIFIERS> <PRIMARY_ID>SRX23803092</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098259</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626055"> <IDENTIFIERS> <PRIMARY_ID>SRS20626055</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098259/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803093" alias="LC1098260"> <IDENTIFIERS> <PRIMARY_ID>SRX23803093</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098260</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626056"> <IDENTIFIERS> <PRIMARY_ID>SRS20626056</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098260/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803094" alias="LC1098262"> <IDENTIFIERS> <PRIMARY_ID>SRX23803094</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098262</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626058"> <IDENTIFIERS> <PRIMARY_ID>SRS20626058</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098262/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803095" alias="LC1098263"> <IDENTIFIERS> <PRIMARY_ID>SRX23803095</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098263</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626057"> <IDENTIFIERS> <PRIMARY_ID>SRS20626057</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098263/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803096" alias="LC1098264"> <IDENTIFIERS> <PRIMARY_ID>SRX23803096</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098264</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626059"> <IDENTIFIERS> <PRIMARY_ID>SRS20626059</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098264/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803097" alias="LC1098268"> <IDENTIFIERS> <PRIMARY_ID>SRX23803097</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098268</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626060"> <IDENTIFIERS> <PRIMARY_ID>SRS20626060</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098268/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803098" alias="LC1098275"> <IDENTIFIERS> <PRIMARY_ID>SRX23803098</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098275</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626061"> <IDENTIFIERS> <PRIMARY_ID>SRS20626061</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098275/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803099" alias="LC1098278"> <IDENTIFIERS> <PRIMARY_ID>SRX23803099</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098278</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626062"> <IDENTIFIERS> <PRIMARY_ID>SRS20626062</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098278/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803100" alias="LC1098279"> <IDENTIFIERS> <PRIMARY_ID>SRX23803100</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098279</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626063"> <IDENTIFIERS> <PRIMARY_ID>SRS20626063</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098279/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803101" alias="LC1098280"> <IDENTIFIERS> <PRIMARY_ID>SRX23803101</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098280</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626064"> <IDENTIFIERS> <PRIMARY_ID>SRS20626064</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098280/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803102" alias="LC1098286"> <IDENTIFIERS> <PRIMARY_ID>SRX23803102</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098286</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626065"> <IDENTIFIERS> <PRIMARY_ID>SRS20626065</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098286/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803103" alias="LC1098289"> <IDENTIFIERS> <PRIMARY_ID>SRX23803103</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098289</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626066"> <IDENTIFIERS> <PRIMARY_ID>SRS20626066</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098289/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803104" alias="LC1098290"> <IDENTIFIERS> <PRIMARY_ID>SRX23803104</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098290</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626067"> <IDENTIFIERS> <PRIMARY_ID>SRS20626067</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098290/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803105" alias="LC1098291"> <IDENTIFIERS> <PRIMARY_ID>SRX23803105</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098291</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626069"> <IDENTIFIERS> <PRIMARY_ID>SRS20626069</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098291/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803106" alias="LC1098292"> <IDENTIFIERS> <PRIMARY_ID>SRX23803106</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098292</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626068"> <IDENTIFIERS> <PRIMARY_ID>SRS20626068</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098292/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803107" alias="LC1098300"> <IDENTIFIERS> <PRIMARY_ID>SRX23803107</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098300</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626070"> <IDENTIFIERS> <PRIMARY_ID>SRS20626070</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098300/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803108" alias="LC1098305"> <IDENTIFIERS> <PRIMARY_ID>SRX23803108</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098305</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626071"> <IDENTIFIERS> <PRIMARY_ID>SRS20626071</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098305/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803109" alias="LC1098307"> <IDENTIFIERS> <PRIMARY_ID>SRX23803109</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098307</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626072"> <IDENTIFIERS> <PRIMARY_ID>SRS20626072</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098307/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803110" alias="LC1098308"> <IDENTIFIERS> <PRIMARY_ID>SRX23803110</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098308</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626075"> <IDENTIFIERS> <PRIMARY_ID>SRS20626075</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098308/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803111" alias="LC1098313"> <IDENTIFIERS> <PRIMARY_ID>SRX23803111</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098313</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626073"> <IDENTIFIERS> <PRIMARY_ID>SRS20626073</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098313/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803112" alias="LC1098659"> <IDENTIFIERS> <PRIMARY_ID>SRX23803112</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098659</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626074"> <IDENTIFIERS> <PRIMARY_ID>SRS20626074</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098659/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803113" alias="LC1098663"> <IDENTIFIERS> <PRIMARY_ID>SRX23803113</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098663</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626076"> <IDENTIFIERS> <PRIMARY_ID>SRS20626076</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098663/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803114" alias="LC1098667"> <IDENTIFIERS> <PRIMARY_ID>SRX23803114</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098667</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626077"> <IDENTIFIERS> <PRIMARY_ID>SRS20626077</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098667/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803115" alias="LC1098670"> <IDENTIFIERS> <PRIMARY_ID>SRX23803115</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098670</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626078"> <IDENTIFIERS> <PRIMARY_ID>SRS20626078</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098670/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803116" alias="LC1098671"> <IDENTIFIERS> <PRIMARY_ID>SRX23803116</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098671</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626079"> <IDENTIFIERS> <PRIMARY_ID>SRS20626079</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098671/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803117" alias="LC1098673"> <IDENTIFIERS> <PRIMARY_ID>SRX23803117</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098673</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626080"> <IDENTIFIERS> <PRIMARY_ID>SRS20626080</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098673/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803118" alias="LC1098682"> <IDENTIFIERS> <PRIMARY_ID>SRX23803118</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098682</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626081"> <IDENTIFIERS> <PRIMARY_ID>SRS20626081</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098682/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803119" alias="LC1098689"> <IDENTIFIERS> <PRIMARY_ID>SRX23803119</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098689</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626082"> <IDENTIFIERS> <PRIMARY_ID>SRS20626082</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098689/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803120" alias="LC1098692"> <IDENTIFIERS> <PRIMARY_ID>SRX23803120</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098692</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626083"> <IDENTIFIERS> <PRIMARY_ID>SRS20626083</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098692/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803121" alias="LC1098693"> <IDENTIFIERS> <PRIMARY_ID>SRX23803121</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098693</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626084"> <IDENTIFIERS> <PRIMARY_ID>SRS20626084</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098693/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803122" alias="LC1098695"> <IDENTIFIERS> <PRIMARY_ID>SRX23803122</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098695</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626085"> <IDENTIFIERS> <PRIMARY_ID>SRS20626085</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098695/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803123" alias="LC1098697"> <IDENTIFIERS> <PRIMARY_ID>SRX23803123</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098697</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626086"> <IDENTIFIERS> <PRIMARY_ID>SRS20626086</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098697/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803124" alias="LC1098698"> <IDENTIFIERS> <PRIMARY_ID>SRX23803124</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098698</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626087"> <IDENTIFIERS> <PRIMARY_ID>SRS20626087</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098698/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803125" alias="LC1098702"> <IDENTIFIERS> <PRIMARY_ID>SRX23803125</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098702</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626088"> <IDENTIFIERS> <PRIMARY_ID>SRS20626088</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098702/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803126" alias="LC1098704"> <IDENTIFIERS> <PRIMARY_ID>SRX23803126</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098704</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626089"> <IDENTIFIERS> <PRIMARY_ID>SRS20626089</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098704/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803127" alias="LC1098709"> <IDENTIFIERS> <PRIMARY_ID>SRX23803127</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098709</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626090"> <IDENTIFIERS> <PRIMARY_ID>SRS20626090</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098709/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803128" alias="LC1098710"> <IDENTIFIERS> <PRIMARY_ID>SRX23803128</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098710</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626093"> <IDENTIFIERS> <PRIMARY_ID>SRS20626093</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098710/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803129" alias="LC1098711"> <IDENTIFIERS> <PRIMARY_ID>SRX23803129</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098711</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626092"> <IDENTIFIERS> <PRIMARY_ID>SRS20626092</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098711/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803130" alias="LC1098715"> <IDENTIFIERS> <PRIMARY_ID>SRX23803130</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098715</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626091"> <IDENTIFIERS> <PRIMARY_ID>SRS20626091</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MA-CDC-LC1098715/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803131" alias="LC1098717"> <IDENTIFIERS> <PRIMARY_ID>SRX23803131</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098717</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626094"> <IDENTIFIERS> <PRIMARY_ID>SRS20626094</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098717/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803132" alias="LC1098718"> <IDENTIFIERS> <PRIMARY_ID>SRX23803132</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098718</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626095"> <IDENTIFIERS> <PRIMARY_ID>SRS20626095</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098718/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803133" alias="LC1098719"> <IDENTIFIERS> <PRIMARY_ID>SRX23803133</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098719</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626096"> <IDENTIFIERS> <PRIMARY_ID>SRS20626096</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098719/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803134" alias="LC1098723"> <IDENTIFIERS> <PRIMARY_ID>SRX23803134</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098723</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626098"> <IDENTIFIERS> <PRIMARY_ID>SRS20626098</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098723/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803135" alias="LC1098730"> <IDENTIFIERS> <PRIMARY_ID>SRX23803135</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098730</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626097"> <IDENTIFIERS> <PRIMARY_ID>SRS20626097</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098730/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803136" alias="LC1098734"> <IDENTIFIERS> <PRIMARY_ID>SRX23803136</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098734</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626099"> <IDENTIFIERS> <PRIMARY_ID>SRS20626099</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098734/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803137" alias="LC1098738"> <IDENTIFIERS> <PRIMARY_ID>SRX23803137</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098738</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626100"> <IDENTIFIERS> <PRIMARY_ID>SRS20626100</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098738/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803138" alias="LC1098739"> <IDENTIFIERS> <PRIMARY_ID>SRX23803138</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098739</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626101"> <IDENTIFIERS> <PRIMARY_ID>SRS20626101</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098739/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803139" alias="LC1098747"> <IDENTIFIERS> <PRIMARY_ID>SRX23803139</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098747</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626102"> <IDENTIFIERS> <PRIMARY_ID>SRS20626102</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098747/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803140" alias="LC1098748"> <IDENTIFIERS> <PRIMARY_ID>SRX23803140</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098748</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626104"> <IDENTIFIERS> <PRIMARY_ID>SRS20626104</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098748/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803141" alias="LC1098750"> <IDENTIFIERS> <PRIMARY_ID>SRX23803141</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098750</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626103"> <IDENTIFIERS> <PRIMARY_ID>SRS20626103</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098750/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803142" alias="LC1098753"> <IDENTIFIERS> <PRIMARY_ID>SRX23803142</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098753</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626105"> <IDENTIFIERS> <PRIMARY_ID>SRS20626105</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098753/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803143" alias="LC1098756"> <IDENTIFIERS> <PRIMARY_ID>SRX23803143</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098756</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626106"> <IDENTIFIERS> <PRIMARY_ID>SRS20626106</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098756/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803144" alias="LC1099008"> <IDENTIFIERS> <PRIMARY_ID>SRX23803144</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099008</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626107"> <IDENTIFIERS> <PRIMARY_ID>SRS20626107</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1099008/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803145" alias="LC1099009"> <IDENTIFIERS> <PRIMARY_ID>SRX23803145</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099009</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626108"> <IDENTIFIERS> <PRIMARY_ID>SRS20626108</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1099009/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803146" alias="LC1099010"> <IDENTIFIERS> <PRIMARY_ID>SRX23803146</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099010</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626109"> <IDENTIFIERS> <PRIMARY_ID>SRS20626109</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1099010/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803147" alias="LC1099017"> <IDENTIFIERS> <PRIMARY_ID>SRX23803147</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099017</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626110"> <IDENTIFIERS> <PRIMARY_ID>SRS20626110</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1099017/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803148" alias="LC1099019"> <IDENTIFIERS> <PRIMARY_ID>SRX23803148</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099019</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626111"> <IDENTIFIERS> <PRIMARY_ID>SRS20626111</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1099019/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803149" alias="LC1099021"> <IDENTIFIERS> <PRIMARY_ID>SRX23803149</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099021</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626112"> <IDENTIFIERS> <PRIMARY_ID>SRS20626112</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1099021/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803150" alias="LC1099023"> <IDENTIFIERS> <PRIMARY_ID>SRX23803150</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099023</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626113"> <IDENTIFIERS> <PRIMARY_ID>SRS20626113</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1099023/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803151" alias="LC1099026"> <IDENTIFIERS> <PRIMARY_ID>SRX23803151</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099026</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626116"> <IDENTIFIERS> <PRIMARY_ID>SRS20626116</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1099026/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803152" alias="LC1099033"> <IDENTIFIERS> <PRIMARY_ID>SRX23803152</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099033</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626114"> <IDENTIFIERS> <PRIMARY_ID>SRS20626114</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1099033/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803153" alias="LC1099034"> <IDENTIFIERS> <PRIMARY_ID>SRX23803153</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099034</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626115"> <IDENTIFIERS> <PRIMARY_ID>SRS20626115</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1099034/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803154" alias="LC1099035"> <IDENTIFIERS> <PRIMARY_ID>SRX23803154</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099035</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626117"> <IDENTIFIERS> <PRIMARY_ID>SRS20626117</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1099035/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803155" alias="LC1099041"> <IDENTIFIERS> <PRIMARY_ID>SRX23803155</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099041</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626118"> <IDENTIFIERS> <PRIMARY_ID>SRS20626118</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1099041/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803156" alias="LC1099044"> <IDENTIFIERS> <PRIMARY_ID>SRX23803156</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099044</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626119"> <IDENTIFIERS> <PRIMARY_ID>SRS20626119</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1099044/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803157" alias="LC1099048"> <IDENTIFIERS> <PRIMARY_ID>SRX23803157</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1099048</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626120"> <IDENTIFIERS> <PRIMARY_ID>SRS20626120</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1099048/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803158" alias="LC1097648"> <IDENTIFIERS> <PRIMARY_ID>SRX23803158</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097648</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626121"> <IDENTIFIERS> <PRIMARY_ID>SRS20626121</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1097648/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803159" alias="LC1097651"> <IDENTIFIERS> <PRIMARY_ID>SRX23803159</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097651</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626122"> <IDENTIFIERS> <PRIMARY_ID>SRS20626122</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1097651/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803160" alias="LC1097653"> <IDENTIFIERS> <PRIMARY_ID>SRX23803160</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097653</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626123"> <IDENTIFIERS> <PRIMARY_ID>SRS20626123</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097653/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803161" alias="LC1097666"> <IDENTIFIERS> <PRIMARY_ID>SRX23803161</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097666</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626124"> <IDENTIFIERS> <PRIMARY_ID>SRS20626124</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097666/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803162" alias="LC1097667"> <IDENTIFIERS> <PRIMARY_ID>SRX23803162</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097667</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626125"> <IDENTIFIERS> <PRIMARY_ID>SRS20626125</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097667/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803163" alias="LC1097677"> <IDENTIFIERS> <PRIMARY_ID>SRX23803163</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097677</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626126"> <IDENTIFIERS> <PRIMARY_ID>SRS20626126</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097677/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803164" alias="LC1097690"> <IDENTIFIERS> <PRIMARY_ID>SRX23803164</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097690</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626127"> <IDENTIFIERS> <PRIMARY_ID>SRS20626127</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097690/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803165" alias="LC1097692"> <IDENTIFIERS> <PRIMARY_ID>SRX23803165</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097692</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626129"> <IDENTIFIERS> <PRIMARY_ID>SRS20626129</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097692/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803166" alias="LC1097695"> <IDENTIFIERS> <PRIMARY_ID>SRX23803166</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097695</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626128"> <IDENTIFIERS> <PRIMARY_ID>SRS20626128</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097695/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803167" alias="LC1097697"> <IDENTIFIERS> <PRIMARY_ID>SRX23803167</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097697</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626130"> <IDENTIFIERS> <PRIMARY_ID>SRS20626130</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097697/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803168" alias="LC1097701"> <IDENTIFIERS> <PRIMARY_ID>SRX23803168</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097701</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626131"> <IDENTIFIERS> <PRIMARY_ID>SRS20626131</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097701/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803169" alias="LC1097704"> <IDENTIFIERS> <PRIMARY_ID>SRX23803169</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097704</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626132"> <IDENTIFIERS> <PRIMARY_ID>SRS20626132</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1097704/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803170" alias="LC1097705"> <IDENTIFIERS> <PRIMARY_ID>SRX23803170</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097705</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626133"> <IDENTIFIERS> <PRIMARY_ID>SRS20626133</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097705/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803171" alias="LC1097706"> <IDENTIFIERS> <PRIMARY_ID>SRX23803171</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097706</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626134"> <IDENTIFIERS> <PRIMARY_ID>SRS20626134</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/KY-CDC-LC1097706/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803172" alias="LC1097715"> <IDENTIFIERS> <PRIMARY_ID>SRX23803172</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097715</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626135"> <IDENTIFIERS> <PRIMARY_ID>SRS20626135</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097715/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803173" alias="LC1097718"> <IDENTIFIERS> <PRIMARY_ID>SRX23803173</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097718</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626136"> <IDENTIFIERS> <PRIMARY_ID>SRS20626136</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1097718/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803174" alias="LC1097721"> <IDENTIFIERS> <PRIMARY_ID>SRX23803174</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097721</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626137"> <IDENTIFIERS> <PRIMARY_ID>SRS20626137</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097721/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803175" alias="LC1097726"> <IDENTIFIERS> <PRIMARY_ID>SRX23803175</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097726</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626138"> <IDENTIFIERS> <PRIMARY_ID>SRS20626138</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097726/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803176" alias="LC1097727"> <IDENTIFIERS> <PRIMARY_ID>SRX23803176</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097727</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626139"> <IDENTIFIERS> <PRIMARY_ID>SRS20626139</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/OH-CDC-LC1097727/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803177" alias="LC1097730"> <IDENTIFIERS> <PRIMARY_ID>SRX23803177</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097730</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626140"> <IDENTIFIERS> <PRIMARY_ID>SRS20626140</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/OH-CDC-LC1097730/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803178" alias="LC1097731"> <IDENTIFIERS> <PRIMARY_ID>SRX23803178</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097731</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626141"> <IDENTIFIERS> <PRIMARY_ID>SRS20626141</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097731/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803179" alias="LC1097732"> <IDENTIFIERS> <PRIMARY_ID>SRX23803179</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097732</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626142"> <IDENTIFIERS> <PRIMARY_ID>SRS20626142</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/KY-CDC-LC1097732/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803180" alias="LC1097743"> <IDENTIFIERS> <PRIMARY_ID>SRX23803180</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097743</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626143"> <IDENTIFIERS> <PRIMARY_ID>SRS20626143</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1097743/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803181" alias="LC1097744"> <IDENTIFIERS> <PRIMARY_ID>SRX23803181</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097744</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626144"> <IDENTIFIERS> <PRIMARY_ID>SRS20626144</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097744/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803182" alias="LC1097749"> <IDENTIFIERS> <PRIMARY_ID>SRX23803182</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097749</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626145"> <IDENTIFIERS> <PRIMARY_ID>SRS20626145</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/OH-CDC-LC1097749/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803183" alias="LC1097750"> <IDENTIFIERS> <PRIMARY_ID>SRX23803183</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097750</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626147"> <IDENTIFIERS> <PRIMARY_ID>SRS20626147</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/WI-CDC-LC1097750/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803184" alias="LC1097751"> <IDENTIFIERS> <PRIMARY_ID>SRX23803184</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097751</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626146"> <IDENTIFIERS> <PRIMARY_ID>SRS20626146</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/KY-CDC-LC1097751/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803185" alias="LC1097755"> <IDENTIFIERS> <PRIMARY_ID>SRX23803185</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097755</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626148"> <IDENTIFIERS> <PRIMARY_ID>SRS20626148</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097755/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803186" alias="LC1097757"> <IDENTIFIERS> <PRIMARY_ID>SRX23803186</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097757</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626149"> <IDENTIFIERS> <PRIMARY_ID>SRS20626149</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1097757/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803187" alias="LC1097761"> <IDENTIFIERS> <PRIMARY_ID>SRX23803187</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097761</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626150"> <IDENTIFIERS> <PRIMARY_ID>SRS20626150</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097761/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803188" alias="LC1097764"> <IDENTIFIERS> <PRIMARY_ID>SRX23803188</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097764</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626151"> <IDENTIFIERS> <PRIMARY_ID>SRS20626151</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TN-CDC-LC1097764/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803189" alias="LC1097765"> <IDENTIFIERS> <PRIMARY_ID>SRX23803189</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097765</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626153"> <IDENTIFIERS> <PRIMARY_ID>SRS20626153</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097765/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803190" alias="LC1097767"> <IDENTIFIERS> <PRIMARY_ID>SRX23803190</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097767</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626152"> <IDENTIFIERS> <PRIMARY_ID>SRS20626152</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097767/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803191" alias="LC1097769"> <IDENTIFIERS> <PRIMARY_ID>SRX23803191</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097769</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626154"> <IDENTIFIERS> <PRIMARY_ID>SRS20626154</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097769/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803192" alias="LC1097770"> <IDENTIFIERS> <PRIMARY_ID>SRX23803192</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097770</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626155"> <IDENTIFIERS> <PRIMARY_ID>SRS20626155</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097770/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803193" alias="LC1097773"> <IDENTIFIERS> <PRIMARY_ID>SRX23803193</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097773</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626156"> <IDENTIFIERS> <PRIMARY_ID>SRS20626156</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097773/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803194" alias="LC1097779"> <IDENTIFIERS> <PRIMARY_ID>SRX23803194</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097779</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626157"> <IDENTIFIERS> <PRIMARY_ID>SRS20626157</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097779/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803195" alias="LC1097782"> <IDENTIFIERS> <PRIMARY_ID>SRX23803195</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097782</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626158"> <IDENTIFIERS> <PRIMARY_ID>SRS20626158</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097782/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803196" alias="LC1097784"> <IDENTIFIERS> <PRIMARY_ID>SRX23803196</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097784</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626159"> <IDENTIFIERS> <PRIMARY_ID>SRS20626159</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097784/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803197" alias="LC1097789"> <IDENTIFIERS> <PRIMARY_ID>SRX23803197</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097789</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626160"> <IDENTIFIERS> <PRIMARY_ID>SRS20626160</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1097789/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803198" alias="LC1097790"> <IDENTIFIERS> <PRIMARY_ID>SRX23803198</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097790</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626161"> <IDENTIFIERS> <PRIMARY_ID>SRS20626161</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097790/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803199" alias="LC1097791"> <IDENTIFIERS> <PRIMARY_ID>SRX23803199</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097791</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626162"> <IDENTIFIERS> <PRIMARY_ID>SRS20626162</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1097791/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803200" alias="LC1097794"> <IDENTIFIERS> <PRIMARY_ID>SRX23803200</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097794</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626164"> <IDENTIFIERS> <PRIMARY_ID>SRS20626164</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097794/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803201" alias="LC1097795"> <IDENTIFIERS> <PRIMARY_ID>SRX23803201</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097795</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626163"> <IDENTIFIERS> <PRIMARY_ID>SRS20626163</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097795/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803202" alias="LC1097797"> <IDENTIFIERS> <PRIMARY_ID>SRX23803202</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097797</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626165"> <IDENTIFIERS> <PRIMARY_ID>SRS20626165</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1097797/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803203" alias="LC1097799"> <IDENTIFIERS> <PRIMARY_ID>SRX23803203</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097799</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626166"> <IDENTIFIERS> <PRIMARY_ID>SRS20626166</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1097799/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803204" alias="LC1097807"> <IDENTIFIERS> <PRIMARY_ID>SRX23803204</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097807</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626168"> <IDENTIFIERS> <PRIMARY_ID>SRS20626168</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097807/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803205" alias="LC1097808"> <IDENTIFIERS> <PRIMARY_ID>SRX23803205</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097808</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626167"> <IDENTIFIERS> <PRIMARY_ID>SRS20626167</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097808/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803206" alias="LC1097817"> <IDENTIFIERS> <PRIMARY_ID>SRX23803206</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097817</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626169"> <IDENTIFIERS> <PRIMARY_ID>SRS20626169</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097817/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803207" alias="LC1097818"> <IDENTIFIERS> <PRIMARY_ID>SRX23803207</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097818</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626170"> <IDENTIFIERS> <PRIMARY_ID>SRS20626170</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/KY-CDC-LC1097818/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803208" alias="LC1097823"> <IDENTIFIERS> <PRIMARY_ID>SRX23803208</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097823</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626171"> <IDENTIFIERS> <PRIMARY_ID>SRS20626171</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097823/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803209" alias="LC1097826"> <IDENTIFIERS> <PRIMARY_ID>SRX23803209</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097826</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626173"> <IDENTIFIERS> <PRIMARY_ID>SRS20626173</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/WI-CDC-LC1097826/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803210" alias="LC1097846"> <IDENTIFIERS> <PRIMARY_ID>SRX23803210</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097846</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626172"> <IDENTIFIERS> <PRIMARY_ID>SRS20626172</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1097846/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803211" alias="LC1097855"> <IDENTIFIERS> <PRIMARY_ID>SRX23803211</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097855</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626174"> <IDENTIFIERS> <PRIMARY_ID>SRS20626174</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097855/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803212" alias="LC1097858"> <IDENTIFIERS> <PRIMARY_ID>SRX23803212</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097858</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626175"> <IDENTIFIERS> <PRIMARY_ID>SRS20626175</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1097858/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803213" alias="LC1097859"> <IDENTIFIERS> <PRIMARY_ID>SRX23803213</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097859</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626176"> <IDENTIFIERS> <PRIMARY_ID>SRS20626176</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1097859/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803214" alias="LC1097860"> <IDENTIFIERS> <PRIMARY_ID>SRX23803214</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097860</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626178"> <IDENTIFIERS> <PRIMARY_ID>SRS20626178</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097860/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803215" alias="LC1097863"> <IDENTIFIERS> <PRIMARY_ID>SRX23803215</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097863</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626177"> <IDENTIFIERS> <PRIMARY_ID>SRS20626177</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/OH-CDC-LC1097863/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803216" alias="LC1097864"> <IDENTIFIERS> <PRIMARY_ID>SRX23803216</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097864</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626179"> <IDENTIFIERS> <PRIMARY_ID>SRS20626179</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1097864/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803217" alias="LC1097869"> <IDENTIFIERS> <PRIMARY_ID>SRX23803217</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097869</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626180"> <IDENTIFIERS> <PRIMARY_ID>SRS20626180</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TN-CDC-LC1097869/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803218" alias="LC1097870"> <IDENTIFIERS> <PRIMARY_ID>SRX23803218</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097870</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626181"> <IDENTIFIERS> <PRIMARY_ID>SRS20626181</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097870/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803219" alias="LC1097875"> <IDENTIFIERS> <PRIMARY_ID>SRX23803219</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097875</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626183"> <IDENTIFIERS> <PRIMARY_ID>SRS20626183</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1097875/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803220" alias="LC1097886"> <IDENTIFIERS> <PRIMARY_ID>SRX23803220</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097886</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626182"> <IDENTIFIERS> <PRIMARY_ID>SRS20626182</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097886/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803221" alias="LC1097887"> <IDENTIFIERS> <PRIMARY_ID>SRX23803221</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1097887</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626184"> <IDENTIFIERS> <PRIMARY_ID>SRS20626184</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1097887/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803222" alias="LC1098327"> <IDENTIFIERS> <PRIMARY_ID>SRX23803222</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098327</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626185"> <IDENTIFIERS> <PRIMARY_ID>SRS20626185</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MS-CDC-LC1098327/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803223" alias="LC1098329"> <IDENTIFIERS> <PRIMARY_ID>SRX23803223</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098329</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626186"> <IDENTIFIERS> <PRIMARY_ID>SRS20626186</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1098329/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803224" alias="LC1098332"> <IDENTIFIERS> <PRIMARY_ID>SRX23803224</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098332</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626188"> <IDENTIFIERS> <PRIMARY_ID>SRS20626188</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/FL-CDC-LC1098332/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803225" alias="LC1098334"> <IDENTIFIERS> <PRIMARY_ID>SRX23803225</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098334</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626187"> <IDENTIFIERS> <PRIMARY_ID>SRS20626187</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1098334/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803226" alias="LC1098343"> <IDENTIFIERS> <PRIMARY_ID>SRX23803226</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098343</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626190"> <IDENTIFIERS> <PRIMARY_ID>SRS20626190</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IL-CDC-LC1098343/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803227" alias="LC1098350"> <IDENTIFIERS> <PRIMARY_ID>SRX23803227</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098350</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626189"> <IDENTIFIERS> <PRIMARY_ID>SRS20626189</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1098350/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803228" alias="LC1098358"> <IDENTIFIERS> <PRIMARY_ID>SRX23803228</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098358</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626191"> <IDENTIFIERS> <PRIMARY_ID>SRS20626191</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1098358/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803229" alias="LC1098359"> <IDENTIFIERS> <PRIMARY_ID>SRX23803229</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098359</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626193"> <IDENTIFIERS> <PRIMARY_ID>SRS20626193</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1098359/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803230" alias="LC1098362"> <IDENTIFIERS> <PRIMARY_ID>SRX23803230</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098362</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626192"> <IDENTIFIERS> <PRIMARY_ID>SRS20626192</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1098362/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803231" alias="LC1098366"> <IDENTIFIERS> <PRIMARY_ID>SRX23803231</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098366</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626194"> <IDENTIFIERS> <PRIMARY_ID>SRS20626194</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-LC1098366/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803232" alias="LC1098368"> <IDENTIFIERS> <PRIMARY_ID>SRX23803232</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098368</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626195"> <IDENTIFIERS> <PRIMARY_ID>SRS20626195</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-LC1098368/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803233" alias="LC1098380"> <IDENTIFIERS> <PRIMARY_ID>SRX23803233</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098380</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626196"> <IDENTIFIERS> <PRIMARY_ID>SRS20626196</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-LC1098380/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803234" alias="LC1098381"> <IDENTIFIERS> <PRIMARY_ID>SRX23803234</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098381</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626197"> <IDENTIFIERS> <PRIMARY_ID>SRS20626197</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/VA-CDC-LC1098381/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803235" alias="LC1098383"> <IDENTIFIERS> <PRIMARY_ID>SRX23803235</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098383</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626198"> <IDENTIFIERS> <PRIMARY_ID>SRS20626198</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MD-CDC-LC1098383/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803236" alias="LC1098390"> <IDENTIFIERS> <PRIMARY_ID>SRX23803236</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098390</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626200"> <IDENTIFIERS> <PRIMARY_ID>SRS20626200</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098390/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803237" alias="LC1098391"> <IDENTIFIERS> <PRIMARY_ID>SRX23803237</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098391</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626199"> <IDENTIFIERS> <PRIMARY_ID>SRS20626199</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098391/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803238" alias="LC1098394"> <IDENTIFIERS> <PRIMARY_ID>SRX23803238</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098394</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626202"> <IDENTIFIERS> <PRIMARY_ID>SRS20626202</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098394/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803239" alias="LC1098403"> <IDENTIFIERS> <PRIMARY_ID>SRX23803239</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098403</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626201"> <IDENTIFIERS> <PRIMARY_ID>SRS20626201</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098403/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803240" alias="LC1098404"> <IDENTIFIERS> <PRIMARY_ID>SRX23803240</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098404</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626204"> <IDENTIFIERS> <PRIMARY_ID>SRS20626204</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098404/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803241" alias="LC1098406"> <IDENTIFIERS> <PRIMARY_ID>SRX23803241</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098406</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626203"> <IDENTIFIERS> <PRIMARY_ID>SRS20626203</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098406/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803242" alias="LC1098407"> <IDENTIFIERS> <PRIMARY_ID>SRX23803242</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098407</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626205"> <IDENTIFIERS> <PRIMARY_ID>SRS20626205</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098407/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803243" alias="LC1098410"> <IDENTIFIERS> <PRIMARY_ID>SRX23803243</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098410</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626206"> <IDENTIFIERS> <PRIMARY_ID>SRS20626206</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098410/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803244" alias="LC1098414"> <IDENTIFIERS> <PRIMARY_ID>SRX23803244</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098414</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626208"> <IDENTIFIERS> <PRIMARY_ID>SRS20626208</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098414/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803245" alias="LC1098421"> <IDENTIFIERS> <PRIMARY_ID>SRX23803245</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098421</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626207"> <IDENTIFIERS> <PRIMARY_ID>SRS20626207</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098421/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803246" alias="LC1098422"> <IDENTIFIERS> <PRIMARY_ID>SRX23803246</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098422</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626212"> <IDENTIFIERS> <PRIMARY_ID>SRS20626212</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NY-CDC-LC1098422/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803247" alias="LC1098423"> <IDENTIFIERS> <PRIMARY_ID>SRX23803247</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098423</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626211"> <IDENTIFIERS> <PRIMARY_ID>SRS20626211</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098423/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803248" alias="LC1098425"> <IDENTIFIERS> <PRIMARY_ID>SRX23803248</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098425</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626209"> <IDENTIFIERS> <PRIMARY_ID>SRS20626209</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/DE-CDC-LC1098425/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803249" alias="LC1098427"> <IDENTIFIERS> <PRIMARY_ID>SRX23803249</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098427</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626210"> <IDENTIFIERS> <PRIMARY_ID>SRS20626210</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098427/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803250" alias="LC1098429"> <IDENTIFIERS> <PRIMARY_ID>SRX23803250</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098429</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626213"> <IDENTIFIERS> <PRIMARY_ID>SRS20626213</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-LC1098429/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX23803251" alias="LC1098430"> <IDENTIFIERS> <PRIMARY_ID>SRX23803251</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">LC1098430</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP325386"> <IDENTIFIERS> <PRIMARY_ID>SRP325386</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716984</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS20626214"> <IDENTIFIERS> <PRIMARY_ID>SRS20626214</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/PA-CDC-LC1098430/2024</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Freed primers</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <PACBIO_SMRT> <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL> </PACBIO_SMRT> </PLATFORM> </EXPERIMENT> </EXPERIMENT_SET>