<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT accession="SRX23810565" alias="GSM8122649_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX23810565</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM8122649_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM8122649: E9.5 Smyd1 KO1 heart ATAC; Mus musculus; ATAC-seq</TITLE>
    <STUDY_REF accession="SRP492834">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP492834</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA1082682</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS20633428">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS20633428</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM8122649</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM8122649</LIBRARY_NAME>
        <LIBRARY_STRATEGY>ATAC-seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Four hearts at E9.5 were pooled per genotype per replicate, and were then dissociated into single cells. 40,000 viable cells were taken for were lysed to isolate nuclei, which were treated with Tn5 transposase (Nextera DNA Sample Prep Kit, Illumina) to isolate DNA. Fragmented DNA was then amplified using bar-coded PCR primers and libraries were seuqenced. Dissociated embryonic cardiac cells were lysed to isolate nuclei, which were treated with Tn5 transposase (Nextera DNA Sample Prep Kit, Illumina) to isolate DNA Fragmented DNA was then amplified using bar-coded PCR primers and libraries were pooled.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX23810566" alias="GSM8122650_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX23810566</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM8122650_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM8122650: E9.5 Smyd1 KO2 heart ATAC; Mus musculus; ATAC-seq</TITLE>
    <STUDY_REF accession="SRP492834">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP492834</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA1082682</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS20633427">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS20633427</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM8122650</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM8122650</LIBRARY_NAME>
        <LIBRARY_STRATEGY>ATAC-seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Four hearts at E9.5 were pooled per genotype per replicate, and were then dissociated into single cells. 40,000 viable cells were taken for were lysed to isolate nuclei, which were treated with Tn5 transposase (Nextera DNA Sample Prep Kit, Illumina) to isolate DNA. Fragmented DNA was then amplified using bar-coded PCR primers and libraries were seuqenced. Dissociated embryonic cardiac cells were lysed to isolate nuclei, which were treated with Tn5 transposase (Nextera DNA Sample Prep Kit, Illumina) to isolate DNA Fragmented DNA was then amplified using bar-coded PCR primers and libraries were pooled.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX23810567" alias="GSM8122651_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX23810567</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM8122651_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM8122651: E9.5 WT1 heart ATAC; Mus musculus; ATAC-seq</TITLE>
    <STUDY_REF accession="SRP492834">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP492834</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA1082682</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS20633429">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS20633429</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM8122651</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM8122651</LIBRARY_NAME>
        <LIBRARY_STRATEGY>ATAC-seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Four hearts at E9.5 were pooled per genotype per replicate, and were then dissociated into single cells. 40,000 viable cells were taken for were lysed to isolate nuclei, which were treated with Tn5 transposase (Nextera DNA Sample Prep Kit, Illumina) to isolate DNA. Fragmented DNA was then amplified using bar-coded PCR primers and libraries were seuqenced. Dissociated embryonic cardiac cells were lysed to isolate nuclei, which were treated with Tn5 transposase (Nextera DNA Sample Prep Kit, Illumina) to isolate DNA Fragmented DNA was then amplified using bar-coded PCR primers and libraries were pooled.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX23810568" alias="GSM8122652_r1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX23810568</PRIMARY_ID>
      <EXTERNAL_ID namespace="GEO">GSM8122652_r1</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>GSM8122652: E9.5 WT2 heart ATAC; Mus musculus; ATAC-seq</TITLE>
    <STUDY_REF accession="SRP492834">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP492834</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA1082682</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS20633430">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS20633430</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM8122652</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GSM8122652</LIBRARY_NAME>
        <LIBRARY_STRATEGY>ATAC-seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Four hearts at E9.5 were pooled per genotype per replicate, and were then dissociated into single cells. 40,000 viable cells were taken for were lysed to isolate nuclei, which were treated with Tn5 transposase (Nextera DNA Sample Prep Kit, Illumina) to isolate DNA. Fragmented DNA was then amplified using bar-coded PCR primers and libraries were seuqenced. Dissociated embryonic cardiac cells were lysed to isolate nuclei, which were treated with Tn5 transposase (Nextera DNA Sample Prep Kit, Illumina) to isolate DNA Fragmented DNA was then amplified using bar-coded PCR primers and libraries were pooled.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
