SRX23819225 RIL_68:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641622 RIL_68 RIL_68:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819226 RIL_319:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641623 RIL_319 RIL_319:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819227 RIL_306:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641624 RIL_306 RIL_306:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819228 RIL_388:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641625 RIL_388 RIL_388:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819229 RIL_385:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641626 RIL_385 RIL_385:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819230 RIL_93:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641627 RIL_93 RIL_93:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819231 RIL_126:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641628 RIL_126 RIL_126:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819232 RIL_245:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641629 RIL_245 RIL_245:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819233 RIL_312:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641630 RIL_312 RIL_312:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819234 RIL_10:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641631 RIL_10 RIL_10:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819235 RIL_211:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641632 RIL_211 RIL_211:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819236 RIL_90:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641633 RIL_90 RIL_90:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819237 RIL_166:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641634 RIL_166 RIL_166:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819238 RIL_377:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641635 RIL_377 RIL_377:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819239 RIL_103:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641636 RIL_103 RIL_103:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819240 RIL_400:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641637 RIL_400 RIL_400:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819241 RIL_389:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641638 RIL_389 RIL_389:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819242 RIL_43:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641639 RIL_43 RIL_43:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819243 RIL_46:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641640 RIL_46 RIL_46:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819244 RIL_362:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641641 RIL_362 RIL_362:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819245 RIL_34:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641642 RIL_34 RIL_34:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819246 RIL_359:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641643 RIL_359 RIL_359:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819247 RIL_86:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641644 RIL_86 RIL_86:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819248 RIL_268:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641645 RIL_268 RIL_268:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819249 RIL_131:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641646 RIL_131 RIL_131:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819250 RIL_119:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641647 RIL_119 RIL_119:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819251 RIL_128:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641648 RIL_128 RIL_128:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819252 RIL_109:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641649 RIL_109 RIL_109:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819253 RIL_80:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641650 RIL_80 RIL_80:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819254 RIL_28:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641651 RIL_28 RIL_28:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819255 RIL_45:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641652 RIL_45 RIL_45:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819256 RIL_246:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641653 RIL_246 RIL_246:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819257 RIL_187:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641654 RIL_187 RIL_187:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819258 RIL_274:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641655 RIL_274 RIL_274:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819259 RIL_260:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641656 RIL_260 RIL_260:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819260 RIL_269:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641657 RIL_269 RIL_269:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819261 RIL_55:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641658 RIL_55 RIL_55:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819262 RIL_6:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641659 RIL_6 RIL_6:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819263 RIL_129:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641660 RIL_129 RIL_129:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819264 RIL_2:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641661 RIL_2 RIL_2:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819265 RIL_185:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641662 RIL_185 RIL_185:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819266 RIL_23:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641663 RIL_23 RIL_23:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819267 RIL_360:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641665 RIL_360 RIL_360:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819268 RIL_157:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641664 RIL_157 RIL_157:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819269 RIL_313:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641666 RIL_313 RIL_313:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819270 RIL_191:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641667 RIL_191 RIL_191:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819271 RIL_114:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641668 RIL_114 RIL_114:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819272 RIL_433:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641669 RIL_433 RIL_433:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819273 RIL_331:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641670 RIL_331 RIL_331:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819274 RIL_95:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641672 RIL_95 RIL_95:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819275 RIL_403:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641671 RIL_403 RIL_403:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819276 RIL_29:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641673 RIL_29 RIL_29:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819277 RIL_182:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641674 RIL_182 RIL_182:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819278 RIL_235:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641675 RIL_235 RIL_235:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819279 RIL_108:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641676 RIL_108 RIL_108:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819280 RIL_226:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641677 RIL_226 RIL_226:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819281 RIL_169:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641678 RIL_169 RIL_169:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819282 RIL_213:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641679 RIL_213 RIL_213:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819283 RIL_219:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641680 RIL_219 RIL_219:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819284 RIL_3:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641681 RIL_3 RIL_3:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819285 RIL_196:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641682 RIL_196 RIL_196:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819286 RIL_84:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641683 RIL_84 RIL_84:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819287 RIL_409:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641684 RIL_409 RIL_409:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819288 RIL_436:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641685 RIL_436 RIL_436:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819289 RIL_305:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641686 RIL_305 RIL_305:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819290 RIL_382:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641687 RIL_382 RIL_382:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819291 RIL_136:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641688 RIL_136 RIL_136:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819292 RIL_21:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641690 RIL_21 RIL_21:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819293 RIL_300:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641689 RIL_300 RIL_300:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819294 RIL_97:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641691 RIL_97 RIL_97:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819295 RIL_33:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641692 RIL_33 RIL_33:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819296 RIL_74:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641693 RIL_74 RIL_74:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819297 RIL_257:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641694 RIL_257 RIL_257:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819298 RIL_277:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641695 RIL_277 RIL_277:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819299 RIL_411:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641696 RIL_411 RIL_411:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819300 RIL_177:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641697 RIL_177 RIL_177:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819301 RIL_18:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641698 RIL_18 RIL_18:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819302 RIL_244:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641699 RIL_244 RIL_244:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819303 RIL_429:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641700 RIL_429 RIL_429:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819304 RIL_178:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641701 RIL_178 RIL_178:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819305 RIL_338:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641702 RIL_338 RIL_338:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819306 RIL_35:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641704 RIL_35 RIL_35:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819307 RIL_15:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641703 RIL_15 RIL_15:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819308 RIL_172:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641705 RIL_172 RIL_172:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819309 RIL_330:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641706 RIL_330 RIL_330:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819310 RIAIL_25:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641708 RIAIL_25 RIAIL_25:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819311 RIAIL_26:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641707 RIAIL_26 RIAIL_26:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819312 RIAIL_27:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641709 RIAIL_27 RIAIL_27:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819313 RIAIL_28:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641710 RIAIL_28 RIAIL_28:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819314 RIAIL_30:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641711 RIAIL_30 RIAIL_30:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819315 RIAIL_29:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641712 RIAIL_29 RIAIL_29:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819316 RIAIL_31:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641713 RIAIL_31 RIAIL_31:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819317 RIAIL_32:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641715 RIAIL_32 RIAIL_32:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819318 RIAIL_33:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641714 RIAIL_33 RIAIL_33:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819319 RIAIL_34:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641716 RIAIL_34 RIAIL_34:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819320 RIL_375:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641717 RIL_375 RIL_375:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819321 RIL_118:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641718 RIL_118 RIL_118:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819322 RIAIL_35:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641719 RIAIL_35 RIAIL_35:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819323 RIAIL_75:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641720 RIAIL_75 RIAIL_75:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819324 RIAIL_76:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641722 RIAIL_76 RIAIL_76:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819325 RIAIL_77:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641721 RIAIL_77 RIAIL_77:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819326 RIAIL_78:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641723 RIAIL_78 RIAIL_78:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819327 RIAIL_79:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641724 RIAIL_79 RIAIL_79:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819328 RIAIL_81:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641725 RIAIL_81 RIAIL_81:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819329 RIAIL_80:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641726 RIAIL_80 RIAIL_80:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819330 RIAIL_82:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641727 RIAIL_82 RIAIL_82:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819331 RIAIL_84:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641728 RIAIL_84 RIAIL_84:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819332 RIAIL_85:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641730 RIAIL_85 RIAIL_85:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819333 RIL_64:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641729 RIL_64 RIL_64:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819334 RIAIL_86:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641731 RIAIL_86 RIAIL_86:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819335 RIL_188:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641732 RIL_188 RIL_188:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819336 RIAIL_87:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641733 RIAIL_87 RIAIL_87:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819337 RIAIL_126:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641735 RIAIL_126 RIAIL_126:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819338 RIAIL_127:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641734 RIAIL_127 RIAIL_127:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819339 RIAIL_128:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641736 RIAIL_128 RIAIL_128:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819340 RIAIL_129:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641737 RIAIL_129 RIAIL_129:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819341 RIAIL_130:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641738 RIAIL_130 RIAIL_130:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819342 RIAIL_132:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641739 RIAIL_132 RIAIL_132:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819343 RIAIL_131:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641740 RIAIL_131 RIAIL_131:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819344 RIAIL_133:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641741 RIAIL_133 RIAIL_133:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819345 RIAIL_134:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641742 RIAIL_134 RIAIL_134:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819346 RIAIL_135:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641743 RIAIL_135 RIAIL_135:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819347 RIL_282:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641744 RIL_282 RIL_282:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819348 RIAIL_136:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641746 RIAIL_136 RIAIL_136:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819349 RIAIL_180:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641745 RIAIL_180 RIAIL_180:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819350 RIAIL_137:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641747 RIAIL_137 RIAIL_137:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819351 RIAIL_181:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641749 RIAIL_181 RIAIL_181:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819352 RIAIL_182:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641748 RIAIL_182 RIAIL_182:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819353 RIAIL_183:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641750 RIAIL_183 RIAIL_183:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819354 RIAIL_184:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641751 RIAIL_184 RIAIL_184:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819355 RIAIL_185:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641752 RIAIL_185 RIAIL_185:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819356 RIAIL_187:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641753 RIAIL_187 RIAIL_187:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819357 RIAIL_186:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641754 RIAIL_186 RIAIL_186:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819358 RIAIL_188:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641755 RIAIL_188 RIAIL_188:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819359 RIAIL_189:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641756 RIAIL_189 RIAIL_189:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819360 RIL_267:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641757 RIL_267 RIL_267:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819361 RIAIL_190:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641758 RIAIL_190 RIAIL_190:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819362 RIAIL_191:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641759 RIAIL_191 RIAIL_191:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819363 RIL_17:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641760 RIL_17 RIL_17:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819364 RIAIL_192:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641761 RIAIL_192 RIAIL_192:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819365 RIL_272:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641762 RIL_272 RIL_272:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819366 RIL_53:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641763 RIL_53 RIL_53:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819367 RIL_342:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641765 RIL_342 RIL_342:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819368 RIL_50:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641764 RIL_50 RIL_50:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819369 RIL_138:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641766 RIL_138 RIL_138:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819370 RIL_110:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641767 RIL_110 RIL_110:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819371 RIL_419:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641768 RIL_419 RIL_419:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819372 RIL_418:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641769 RIL_418 RIL_418:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819373 RIL_173:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641770 RIL_173 RIL_173:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819374 RIL_413:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641771 RIL_413 RIL_413:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819375 RIL_366:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641772 RIL_366 RIL_366:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819376 RIL_150:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641773 RIL_150 RIL_150:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819377 RIL_42:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641774 RIL_42 RIL_42:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819378 RIL_27:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641775 RIL_27 RIL_27:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819379 RIL_321:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641776 RIL_321 RIL_321:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819380 RIL_151:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641777 RIL_151 RIL_151:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819381 RIL_365:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641778 RIL_365 RIL_365:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819382 RIL_200:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641779 RIL_200 RIL_200:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819383 RIL_112:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641781 RIL_112 RIL_112:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819384 RIL_183:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641782 RIL_183 RIL_183:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819385 RIL_141:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641780 RIL_141 RIL_141:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819386 RIL_184:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641783 RIL_184 RIL_184:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819387 RIL_295:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641784 RIL_295 RIL_295:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819388 RIL_117:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641785 RIL_117 RIL_117:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819389 RIL_369:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641786 RIL_369 RIL_369:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819390 RIL_38:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641787 RIL_38 RIL_38:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819391 RIL_143:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641789 RIL_143 RIL_143:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819392 RIL_9:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641788 RIL_9 RIL_9:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819393 RIL_364:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641790 RIL_364 RIL_364:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819394 RIL_371:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641791 RIL_371 RIL_371:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819395 RIL_199:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641792 RIL_199 RIL_199:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819396 RIL_127:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641793 RIL_127 RIL_127:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819397 RIL_332:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641794 RIL_332 RIL_332:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819398 RIL_147:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641795 RIL_147 RIL_147:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819399 RIL_404:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641796 RIL_404 RIL_404:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819400 RIL_47:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641797 RIL_47 RIL_47:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819401 RIL_276:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641798 RIL_276 RIL_276:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819402 RIL_88:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641799 RIL_88 RIL_88:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819403 RIL_79:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641800 RIL_79 RIL_79:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819404 RIL_392:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641801 RIL_392 RIL_392:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819405 RIL_307:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641802 RIL_307 RIL_307:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819406 RIL_19:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641803 RIL_19 RIL_19:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819407 RIL_294:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641804 RIL_294 RIL_294:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819408 RIL_63:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641805 RIL_63 RIL_63:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819409 RIL_325:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641807 RIL_325 RIL_325:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819410 RIL_298:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641808 RIL_298 RIL_298:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819411 RIL_376:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641806 RIL_376 RIL_376:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819412 RIL_253:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641809 RIL_253 RIL_253:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819413 RIL_78:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641810 RIL_78 RIL_78:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819414 RIL_25:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641811 RIL_25 RIL_25:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819415 RIL_352:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641812 RIL_352 RIL_352:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819416 RIL_40:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641813 RIL_40 RIL_40:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819417 RIL_247:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641814 RIL_247 RIL_247:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819418 RIL_145:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641815 RIL_145 RIL_145:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819419 RIL_179:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641816 RIL_179 RIL_179:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819420 RIL_437:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641817 RIL_437 RIL_437:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819421 RIL_401:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641818 RIL_401 RIL_401:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819422 RIL_348:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641820 RIL_348 RIL_348:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819423 RIL_340:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641819 RIL_340 RIL_340:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819424 RIL_345:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641821 RIL_345 RIL_345:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819425 RIL_391:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641822 RIL_391 RIL_391:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819426 RIL_284:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641823 RIL_284 RIL_284:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819427 RIL_144:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641825 RIL_144 RIL_144:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819428 RIL_71:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641824 RIL_71 RIL_71:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819429 RIL_51:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641826 RIL_51 RIL_51:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819430 RIL_394:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641827 RIL_394 RIL_394:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819431 RIL_381:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641828 RIL_381 RIL_381:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819432 RIL_336:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641829 RIL_336 RIL_336:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819433 RIL_89:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641830 RIL_89 RIL_89:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819434 RIL_206:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641831 RIL_206 RIL_206:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819435 RIL_176:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641832 RIL_176 RIL_176:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819436 RIL_326:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641835 RIL_326 RIL_326:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819437 RIL_56:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641834 RIL_56 RIL_56:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819438 RIL_133:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641833 RIL_133 RIL_133:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819439 RIL_67:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641836 RIL_67 RIL_67:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819440 RIL_335:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641837 RIL_335 RIL_335:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819441 RIL_7:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641838 RIL_7 RIL_7:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819442 RIL_236:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641839 RIL_236 RIL_236:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819443 RIL_424:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641840 RIL_424 RIL_424:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819444 RIL_59:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641841 RIL_59 RIL_59:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819445 RIL_314:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641842 RIL_314 RIL_314:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819446 RIL_386:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641843 RIL_386 RIL_386:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819447 RIL_250:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641844 RIL_250 RIL_250:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819448 RIAIL_1:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641845 RIAIL_1 RIAIL_1:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819449 RIAIL_2:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641846 RIAIL_2 RIAIL_2:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819450 RIAIL_3:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641848 RIAIL_3 RIAIL_3:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819451 RIAIL_4:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641847 RIAIL_4 RIAIL_4:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819452 RIAIL_5:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641849 RIAIL_5 RIAIL_5:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819453 RIL_171:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641850 RIL_171 RIL_171:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819454 RIAIL_6:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641851 RIAIL_6 RIAIL_6:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819455 RIAIL_7:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641853 RIAIL_7 RIAIL_7:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819456 RIAIL_8:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641852 RIAIL_8 RIAIL_8:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819457 RIAIL_9:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641854 RIAIL_9 RIAIL_9:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819458 RIAIL_10:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641855 RIAIL_10 RIAIL_10:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819459 RIAIL_49:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641856 RIAIL_49 RIAIL_49:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819460 RIAIL_11:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641857 RIAIL_11 RIAIL_11:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819461 RIAIL_50:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641858 RIAIL_50 RIAIL_50:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819462 RIAIL_51:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641859 RIAIL_51 RIAIL_51:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819463 RIAIL_52:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641861 RIAIL_52 RIAIL_52:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819464 RIAIL_53:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641860 RIAIL_53 RIAIL_53:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819465 RIAIL_54:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641862 RIAIL_54 RIAIL_54:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819466 RIAIL_55:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641863 RIAIL_55 RIAIL_55:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819467 RIL_275:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641864 RIL_275 RIL_275:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819468 RIAIL_56:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641865 RIAIL_56 RIAIL_56:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819469 RIAIL_57:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641866 RIAIL_57 RIAIL_57:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819470 RIAIL_58:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641867 RIAIL_58 RIAIL_58:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819471 RIAIL_59:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641868 RIAIL_59 RIAIL_59:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819472 RIAIL_60:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641869 RIAIL_60 RIAIL_60:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819473 RIAIL_101:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641870 RIAIL_101 RIAIL_101:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819474 RIAIL_61:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641871 RIAIL_61 RIAIL_61:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819475 RIAIL_102:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641872 RIAIL_102 RIAIL_102:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819476 RIAIL_103:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641874 RIAIL_103 RIAIL_103:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819477 RIAIL_104:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641873 RIAIL_104 RIAIL_104:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819478 RIAIL_105:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641875 RIAIL_105 RIAIL_105:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819479 RIL_410:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641876 RIL_410 RIL_410:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819480 RIAIL_107:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641877 RIAIL_107 RIAIL_107:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819481 RIAIL_106:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641878 RIAIL_106 RIAIL_106:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819482 RIAIL_108:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641879 RIAIL_108 RIAIL_108:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819483 RIAIL_109:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641880 RIAIL_109 RIAIL_109:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819484 RIAIL_110:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641881 RIAIL_110 RIAIL_110:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819485 RIAIL_111:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641882 RIAIL_111 RIAIL_111:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819486 RIAIL_112:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641884 RIAIL_112 RIAIL_112:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819487 RIAIL_151:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641883 RIAIL_151 RIAIL_151:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819488 RIAIL_113:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641885 RIAIL_113 RIAIL_113:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819489 RIAIL_152:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641886 RIAIL_152 RIAIL_152:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819490 RIAIL_153:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641887 RIAIL_153 RIAIL_153:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819491 RIAIL_154:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641888 RIAIL_154 RIAIL_154:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819492 RIAIL_155:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641890 RIAIL_155 RIAIL_155:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819493 RIL_57:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641889 RIL_57 RIL_57:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819494 RIAIL_159:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641892 RIAIL_159 RIAIL_159:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819495 RIAIL_156:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641891 RIAIL_156 RIAIL_156:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819496 RIAIL_160:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641893 RIAIL_160 RIAIL_160:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819497 RIAIL_161:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641894 RIAIL_161 RIAIL_161:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819498 RIAIL_164:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641895 RIAIL_164 RIAIL_164:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819499 RIAIL_165:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641896 RIAIL_165 RIAIL_165:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819500 RIAIL_166:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641897 RIAIL_166 RIAIL_166:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819501 RIL_41:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641898 RIL_41 RIL_41:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819502 RIAIL_167:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641899 RIAIL_167 RIAIL_167:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819503 RIL_281:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641900 RIL_281 RIL_281:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819504 RIL_1:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641901 RIL_1 RIL_1:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819505 RIL_201:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641903 RIL_201 RIL_201:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819506 RIL_327:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641902 RIL_327 RIL_327:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819507 RIL_122:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641904 RIL_122 RIL_122:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819508 RIL_132:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641905 RIL_132 RIL_132:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819509 RIL_111:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641906 RIL_111 RIL_111:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819510 RIL_152:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641907 RIL_152 RIL_152:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819511 RIL_310:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641908 RIL_310 RIL_310:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819512 RIL_106:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641909 RIL_106 RIL_106:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819513 RIL_423:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641910 RIL_423 RIL_423:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819514 RIL_254:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641911 RIL_254 RIL_254:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819515 RIL_44:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641912 RIL_44 RIL_44:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819516 RIL_370:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641913 RIL_370 RIL_370:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819517 RIL_197:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641914 RIL_197 RIL_197:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819518 RIL_358:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641916 RIL_358 RIL_358:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819519 RIL_134:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641917 RIL_134 RIL_134:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819520 RIL_210:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641915 RIL_210 RIL_210:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819521 RIL_161:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641918 RIL_161 RIL_161:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819522 RIL_190:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641919 RIL_190 RIL_190:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819523 RIL_107:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641920 RIL_107 RIL_107:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819524 RIL_353:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641921 RIL_353 RIL_353:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819525 RIL_323:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641922 RIL_323 RIL_323:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819526 RIL_426:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641923 RIL_426 RIL_426:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819527 RIL_207:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641924 RIL_207 RIL_207:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819528 RIL_255:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641925 RIL_255 RIL_255:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819529 RIL_222:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641927 RIL_222 RIL_222:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819530 RIL_435:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641926 RIL_435 RIL_435:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819531 RIL_347:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641928 RIL_347 RIL_347:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819532 RIL_271:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641929 RIL_271 RIL_271:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819533 RIL_52:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641930 RIL_52 RIL_52:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819534 RIL_102:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641931 RIL_102 RIL_102:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819535 RIL_212:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641932 RIL_212 RIL_212:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819536 RIL_4:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641933 RIL_4 RIL_4:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819537 RIL_54:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641935 RIL_54 RIL_54:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819538 RIL_225:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641934 RIL_225 RIL_225:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819539 RIL_215:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641936 RIL_215 RIL_215:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819540 RIL_320:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641937 RIL_320 RIL_320:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819541 RIL_430:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641938 RIL_430 RIL_430:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819542 RIL_39:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641940 RIL_39 RIL_39:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819543 RIL_104:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641939 RIL_104 RIL_104:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819544 RIL_328:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641941 RIL_328 RIL_328:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819545 RIL_395:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641942 RIL_395 RIL_395:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819546 RIL_380:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641944 RIL_380 RIL_380:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819547 RIL_11:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641943 RIL_11 RIL_11:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819548 RIL_203:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641945 RIL_203 RIL_203:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819549 RIL_48:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641946 RIL_48 RIL_48:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819550 RIL_383:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641947 RIL_383 RIL_383:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819551 RIL_318:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641948 RIL_318 RIL_318:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819552 RIL_61:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641949 RIL_61 RIL_61:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819553 RIL_346:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641951 RIL_346 RIL_346:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819554 RIL_233:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641950 RIL_233 RIL_233:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819555 RIL_135:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641952 RIL_135 RIL_135:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819556 RIL_301:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641953 RIL_301 RIL_301:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819557 RIL_217:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641954 RIL_217 RIL_217:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819558 RIL_165:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641955 RIL_165 RIL_165:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819559 RIL_92:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641956 RIL_92 RIL_92:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819560 RIL_186:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641957 RIL_186 RIL_186:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819561 RIL_231:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641959 RIL_231 RIL_231:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819562 RIL_37:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641958 RIL_37 RIL_37:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819563 RIL_357:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641961 RIL_357 RIL_357:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819564 RIL_116:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641962 RIL_116 RIL_116:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819565 RIL_22:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641960 RIL_22 RIL_22:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819566 RIL_405:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641963 RIL_405 RIL_405:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819567 RIL_343:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641964 RIL_343 RIL_343:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819568 RIL_49:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641965 RIL_49 RIL_49:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819569 RIL_36:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641966 RIL_36 RIL_36:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819570 RIL_355:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641967 RIL_355 RIL_355:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819571 RIL_96:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641968 RIL_96 RIL_96:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819572 RIL_316:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641969 RIL_316 RIL_316:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819573 RIL_399:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641971 RIL_399 RIL_399:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819574 RIL_258:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641970 RIL_258 RIL_258:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819575 RIL_402:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641972 RIL_402 RIL_402:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819576 RIL_283:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641974 RIL_283 RIL_283:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819577 RIL_304:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641973 RIL_304 RIL_304:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819578 RIL_20:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641975 RIL_20 RIL_20:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819579 RIL_120:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641977 RIL_120 RIL_120:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819580 RIL_264:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641976 RIL_264 RIL_264:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819581 RIL_230:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641978 RIL_230 RIL_230:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819582 RIL_192:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641980 RIL_192 RIL_192:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819583 RIAIL_12:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641979 RIAIL_12 RIAIL_12:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819584 RIL_262:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641981 RIL_262 RIL_262:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819585 RIAIL_13:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641982 RIAIL_13 RIAIL_13:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819586 RIAIL_14:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641983 RIAIL_14 RIAIL_14:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819587 RIL_214:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641984 RIL_214 RIL_214:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819588 RIAIL_15:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641986 RIAIL_15 RIAIL_15:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819589 RIAIL_16:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641987 RIAIL_16 RIAIL_16:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819590 RIAIL_18:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641985 RIAIL_18 RIAIL_18:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819591 RIAIL_17:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641988 RIAIL_17 RIAIL_17:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819592 RIAIL_19:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641989 RIAIL_19 RIAIL_19:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819593 RIAIL_20:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641990 RIAIL_20 RIAIL_20:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819594 RIAIL_21:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641991 RIAIL_21 RIAIL_21:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819595 RIAIL_22:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641992 RIAIL_22 RIAIL_22:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819596 RIAIL_23:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641993 RIAIL_23 RIAIL_23:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819597 RIAIL_62:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641995 RIAIL_62 RIAIL_62:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819598 RIAIL_24:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641996 RIAIL_24 RIAIL_24:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819599 RIAIL_63:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641994 RIAIL_63 RIAIL_63:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819600 RIAIL_64:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641997 RIAIL_64 RIAIL_64:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819601 RIL_292:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642000 RIL_292 RIL_292:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819602 RIAIL_65:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641999 RIAIL_65 RIAIL_65:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819603 RIAIL_66:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20641998 RIAIL_66 RIAIL_66:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819604 RIAIL_68:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642001 RIAIL_68 RIAIL_68:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819605 RIAIL_67:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642002 RIAIL_67 RIAIL_67:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819606 RIAIL_69:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642003 RIAIL_69 RIAIL_69:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819607 RIAIL_70:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642004 RIAIL_70 RIAIL_70:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819608 RIAIL_71:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642005 RIAIL_71 RIAIL_71:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819609 RIAIL_72:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642006 RIAIL_72 RIAIL_72:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819610 RIAIL_73:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642008 RIAIL_73 RIAIL_73:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819611 RIAIL_114:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642007 RIAIL_114 RIAIL_114:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819612 RIAIL_74:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642009 RIAIL_74 RIAIL_74:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819613 RIAIL_115:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642010 RIAIL_115 RIAIL_115:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819614 RIL_438:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642011 RIL_438 RIL_438:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819615 RIAIL_116:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642012 RIAIL_116 RIAIL_116:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819616 RIAIL_117:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642014 RIAIL_117 RIAIL_117:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819617 RIAIL_118:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642013 RIAIL_118 RIAIL_118:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819618 RIAIL_120:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642015 RIAIL_120 RIAIL_120:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819619 RIAIL_119:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642017 RIAIL_119 RIAIL_119:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819620 RIAIL_121:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642016 RIAIL_121 RIAIL_121:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819621 RIAIL_122:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642018 RIAIL_122 RIAIL_122:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819622 RIAIL_123:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642020 RIAIL_123 RIAIL_123:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819623 RIAIL_124:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642019 RIAIL_124 RIAIL_124:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819624 RIAIL_125:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642021 RIAIL_125 RIAIL_125:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819625 RIAIL_168:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642023 RIAIL_168 RIAIL_168:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819626 RIL_62:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642022 RIL_62 RIL_62:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819627 RIAIL_169:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642024 RIAIL_169 RIAIL_169:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819628 RIL_363:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642025 RIL_363 RIL_363:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819629 RIAIL_170:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642026 RIAIL_170 RIAIL_170:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819630 RIAIL_171:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642027 RIAIL_171 RIAIL_171:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819631 RIAIL_172:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642028 RIAIL_172 RIAIL_172:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819632 RIAIL_174:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642030 RIAIL_174 RIAIL_174:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819633 RIAIL_173:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642029 RIAIL_173 RIAIL_173:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819634 RIAIL_175:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642031 RIAIL_175 RIAIL_175:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819635 RIAIL_176:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642032 RIAIL_176 RIAIL_176:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819636 RIAIL_177:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642033 RIAIL_177 RIAIL_177:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819637 RIAIL_178:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642034 RIAIL_178 RIAIL_178:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819638 RIAIL_179:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642035 RIAIL_179 RIAIL_179:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819639 RIL_406:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642037 RIL_406 RIL_406:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819640 RIL_66:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642036 RIL_66 RIL_66:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819641 RIL_422:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642039 RIL_422 RIL_422:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819642 RIL_387:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642038 RIL_387 RIL_387:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819643 RIL_434:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642040 RIL_434 RIL_434:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819644 RIL_339:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642041 RIL_339 RIL_339:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819645 RIL_297:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642042 RIL_297 RIL_297:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819646 RIL_113:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642044 RIL_113 RIL_113:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819647 RIL_218:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642043 RIL_218 RIL_218:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819648 RIL_242:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642046 RIL_242 RIL_242:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819649 RIL_270:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642045 RIL_270 RIL_270:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819650 RIL_334:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642047 RIL_334 RIL_334:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819651 RIL_239:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642048 RIL_239 RIL_239:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819652 RIL_123:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642049 RIL_123 RIL_123:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819653 RIL_440:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642050 RIL_440 RIL_440:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819654 RIL_98:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642051 RIL_98 RIL_98:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819655 RIL_220:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642052 RIL_220 RIL_220:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819656 RIL_14:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642053 RIL_14 RIL_14:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819657 RIL_181:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642054 RIL_181 RIL_181:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819658 RIL_164:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642055 RIL_164 RIL_164:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819659 RIL_356:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642056 RIL_356 RIL_356:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819660 RIL_241:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642057 RIL_241 RIL_241:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819661 RIL_417:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642058 RIL_417 RIL_417:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819662 RIL_374:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642059 RIL_374 RIL_374:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819663 RIL_291:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642060 RIL_291 RIL_291:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819664 RIL_159:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642061 RIL_159 RIL_159:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819665 RIL_77:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642062 RIL_77 RIL_77:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819666 RIL_115:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642063 RIL_115 RIL_115:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819667 RIL_354:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642064 RIL_354 RIL_354:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819668 RIL_299:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642065 RIL_299 RIL_299:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819669 RIL_82:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642067 RIL_82 RIL_82:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819670 RIL_101:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642066 RIL_101 RIL_101:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819671 RIL_193:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642069 RIL_193 RIL_193:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819672 RIL_69:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642068 RIL_69 RIL_69:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819673 RIL_223:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642070 RIL_223 RIL_223:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819674 RIL_378:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642071 RIL_378 RIL_378:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819675 RIL_205:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642072 RIL_205 RIL_205:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819676 RIL_279:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642073 RIL_279 RIL_279:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819677 RIL_427:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642074 RIL_427 RIL_427:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819678 RIL_393:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642075 RIL_393 RIL_393:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819679 RIL_175:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642076 RIL_175 RIL_175:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819680 RIL_416:EA-29:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642077 RIL_416 RIL_416:EA-29:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819681 RIL_65:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642078 RIL_65 RIL_65:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819682 RIL_153:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642079 RIL_153 RIL_153:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819683 RIL_367:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642081 RIL_367 RIL_367:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819684 RIL_229:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642080 RIL_229 RIL_229:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819685 RIL_333:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642082 RIL_333 RIL_333:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819686 RIL_302:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642083 RIL_302 RIL_302:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819687 RIL_85:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642084 RIL_85 RIL_85:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819688 RIL_204:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642085 RIL_204 RIL_204:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819689 RIL_156:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642086 RIL_156 RIL_156:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819690 RIL_396:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642087 RIL_396 RIL_396:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819691 RIL_311:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642088 RIL_311 RIL_311:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819692 RIL_349:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642089 RIL_349 RIL_349:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819693 RIL_251:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642090 RIL_251 RIL_251:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819694 RIL_303:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642092 RIL_303 RIL_303:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819695 RIL_137:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642091 RIL_137 RIL_137:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819696 RIL_5:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642093 RIL_5 RIL_5:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819697 RIL_234:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642094 RIL_234 RIL_234:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819698 RIL_289:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642095 RIL_289 RIL_289:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819699 RIL_296:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642096 RIL_296 RIL_296:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819700 RIL_329:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642097 RIL_329 RIL_329:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819701 RIL_94:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642098 RIL_94 RIL_94:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819702 RIL_149:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642099 RIL_149 RIL_149:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819703 RIL_174:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642100 RIL_174 RIL_174:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819704 RIL_130:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642101 RIL_130 RIL_130:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819705 RIL_293:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642103 RIL_293 RIL_293:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819706 RIL_208:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642102 RIL_208 RIL_208:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819707 RIL_397:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642104 RIL_397 RIL_397:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819708 RIL_372:EA-30:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642105 RIL_372 RIL_372:EA-30:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819709 RIL_256:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642106 RIL_256 RIL_256:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819710 RIL_202:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642107 RIL_202 RIL_202:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819711 RIL_60:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642108 RIL_60 RIL_60:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819712 RIL_259:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642109 RIL_259 RIL_259:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819713 RIL_238:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642110 RIL_238 RIL_238:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819714 RIL_24:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642111 RIL_24 RIL_24:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819715 RIL_237:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642112 RIL_237 RIL_237:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819716 RIL_32:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642113 RIL_32 RIL_32:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819717 RIL_428:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642114 RIL_428 RIL_428:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819718 RIL_31:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642115 RIL_31 RIL_31:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819719 RIL_286:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642116 RIL_286 RIL_286:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819720 RIL_341:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642117 RIL_341 RIL_341:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819721 RIL_189:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642119 RIL_189 RIL_189:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819722 RIL_224:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642118 RIL_224 RIL_224:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819723 RIL_421:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642120 RIL_421 RIL_421:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819724 RIL_407:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642121 RIL_407 RIL_407:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819725 RIL_154:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642122 RIL_154 RIL_154:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819726 RIL_209:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642123 RIL_209 RIL_209:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819727 RIL_432:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642124 RIL_432 RIL_432:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819728 RIL_70:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642125 RIL_70 RIL_70:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819729 RIL_412:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642126 RIL_412 RIL_412:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819730 RIL_265:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642127 RIL_265 RIL_265:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819731 RIL_26:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642129 RIL_26 RIL_26:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819732 RIL_361:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642128 RIL_361 RIL_361:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819733 RIL_290:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642130 RIL_290 RIL_290:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819734 RIL_384:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642131 RIL_384 RIL_384:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819735 RIL_350:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642132 RIL_350 RIL_350:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819736 RIL_105:EA-31:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642133 RIL_105 RIL_105:EA-31:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819737 RIAIL_36:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642134 RIAIL_36 RIAIL_36:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819738 RIAIL_37:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642137 RIAIL_37 RIAIL_37:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819739 RIAIL_38:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642135 RIAIL_38 RIAIL_38:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819740 RIAIL_39:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642136 RIAIL_39 RIAIL_39:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819741 RIAIL_40:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642138 RIAIL_40 RIAIL_40:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819742 RIAIL_41:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642139 RIAIL_41 RIAIL_41:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819743 RIAIL_42:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642140 RIAIL_42 RIAIL_42:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819744 RIAIL_43:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642141 RIAIL_43 RIAIL_43:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819745 RIAIL_44:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642142 RIAIL_44 RIAIL_44:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819746 RIL_266:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642143 RIL_266 RIL_266:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819747 RIAIL_45:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642145 RIAIL_45 RIAIL_45:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819748 RIAIL_46:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642144 RIAIL_46 RIAIL_46:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819749 RIAIL_47:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642146 RIAIL_47 RIAIL_47:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819750 RIAIL_48:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642149 RIAIL_48 RIAIL_48:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819751 RIAIL_88:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642147 RIAIL_88 RIAIL_88:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819752 RIAIL_89:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642148 RIAIL_89 RIAIL_89:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819753 RIAIL_90:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642150 RIAIL_90 RIAIL_90:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819754 RIAIL_91:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642151 RIAIL_91 RIAIL_91:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819755 RIAIL_92:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642152 RIAIL_92 RIAIL_92:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819756 RIAIL_93:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642153 RIAIL_93 RIAIL_93:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819757 RIAIL_94:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642154 RIAIL_94 RIAIL_94:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819758 RIAIL_95:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642155 RIAIL_95 RIAIL_95:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819759 RIL_439:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642156 RIL_439 RIL_439:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819760 RIAIL_96:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642158 RIAIL_96 RIAIL_96:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819761 RIAIL_97:CB-1:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642157 RIAIL_97 RIAIL_97:CB-1:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819762 RIAIL_98:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642159 RIAIL_98 RIAIL_98:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819763 RIAIL_99:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642160 RIAIL_99 RIAIL_99:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819764 RIAIL_100:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642161 RIAIL_100 RIAIL_100:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819765 RIAIL_138:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642162 RIAIL_138 RIAIL_138:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819766 RIAIL_139:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642163 RIAIL_139 RIAIL_139:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819767 RIAIL_140:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642164 RIAIL_140 RIAIL_140:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819768 RIAIL_141:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642165 RIAIL_141 RIAIL_141:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819769 RIAIL_142:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642167 RIAIL_142 RIAIL_142:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819770 RIAIL_143:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642168 RIAIL_143 RIAIL_143:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819771 RIAIL_144:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642169 RIAIL_144 RIAIL_144:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819772 RIAIL_145:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642166 RIAIL_145 RIAIL_145:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819773 RIL_168:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642170 RIL_168 RIL_168:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819774 RIAIL_146:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642171 RIAIL_146 RIAIL_146:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819775 RIAIL_147:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642174 RIAIL_147 RIAIL_147:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819776 RIAIL_148:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642173 RIAIL_148 RIAIL_148:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819777 RIAIL_149:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642172 RIAIL_149 RIAIL_149:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819778 RIAIL_150:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642175 RIAIL_150 RIAIL_150:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819779 RIAIL_193:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642176 RIAIL_193 RIAIL_193:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819780 RIAIL_194:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642177 RIAIL_194 RIAIL_194:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819781 RIAIL_196:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642178 RIAIL_196 RIAIL_196:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819782 RIAIL_197:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642179 RIAIL_197 RIAIL_197:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819783 RIAIL_198:CB-2:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642180 RIAIL_198 RIAIL_198:CB-2:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819784 RIL_121:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642181 RIL_121 RIL_121:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819785 RIL_195:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642182 RIL_195 RIL_195:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819786 RIL_83:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642184 RIL_83 RIL_83:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819787 RIL_232:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642183 RIL_232 RIL_232:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819788 RIL_431:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642185 RIL_431 RIL_431:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819789 RIL_261:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642186 RIL_261 RIL_261:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819790 RIL_162:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642188 RIL_162 RIL_162:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819791 RIL_12:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642187 RIL_12 RIL_12:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000 SRX23819792 RIL_317:EA-28:paired:WGS:IlluminaHiSeq4000 SRP493035 bp0 We isolated genomic DNA from 100 to 300 l nematode pellets using the Blood and Tissue DNA isolation kit cat# 69506 (QIAGEN, Valencia, CA). We measured the concentration of DNA for each sample with the Qubit dsDNA Broad Range Assay Kit cat# Q32850 (Invitrogen, Carlsbad, CA) and diluted all samples to 0.2 ng/L. We then incubated each sample with diluted Illumina transposome cat# FC-121-1031 (Illumina, San Diego, CA) and amplified the tagmented fragments with barcoded primers. We combined the uniquely indexed samples into 96-sample pooled libraries. We size-selected the libraries by separating the material on a 2% agarose gel, extracting the fragments ranging from 400-600 bp, and purifying the extraction with the QIAquick Gel Extraction Kit cat# 28706 (QIAGEN, Valencia, CA). We determined the concentration and size distribution of the purified libraries with the 2100 Bioanalyzer (Agilent, Santa Clara, CA) before submitting them to the NUSeq Core Facility of Northwestern University where they were sequenced on the Illumina HiSeq4000 platform (paired-end 150 bp reads). SRS20642189 RIL_317 RIL_317:EA-28:paired:WGS:IlluminaHiSeq4000 WGS GENOMIC RANDOM Illumina HiSeq 4000