SRX23865642 G1_07 SRP490782 PRJNA1078834 RNA was extracted from cecal tissue using TRIzol followed by the Qiagen RNeasy kit. PolyA enrichment was used to purify mRNA, which were then submitted for bulk sequencing. SRS20684617 RNAseq Control Mouse 1 Day 2 G1_07 RNA-Seq TRANSCRIPTOMIC PolyA Illumina NovaSeq 6000 SRX23865643 G1_08 SRP490782 PRJNA1078834 RNA was extracted from cecal tissue using TRIzol followed by the Qiagen RNeasy kit. PolyA enrichment was used to purify mRNA, which were then submitted for bulk sequencing. SRS20684616 RNAseq Control Mouse 2 Day 2 G1_08 RNA-Seq TRANSCRIPTOMIC PolyA Illumina NovaSeq 6000 SRX23865644 G3_29 SRP490782 PRJNA1078834 RNA was extracted from cecal tissue using TRIzol followed by the Qiagen RNeasy kit. PolyA enrichment was used to purify mRNA, which were then submitted for bulk sequencing. SRS20684618 RNAseq FMT Donor Mouse 3 Day 2 G3_29 RNA-Seq TRANSCRIPTOMIC PolyA Illumina NovaSeq 6000 SRX23865645 G3_30 SRP490782 PRJNA1078834 RNA was extracted from cecal tissue using TRIzol followed by the Qiagen RNeasy kit. PolyA enrichment was used to purify mRNA, which were then submitted for bulk sequencing. SRS20684620 RNAseq FMT Donor Mouse 4 Day 2 G3_30 RNA-Seq TRANSCRIPTOMIC PolyA Illumina NovaSeq 6000 SRX23865646 G1_09 SRP490782 PRJNA1078834 RNA was extracted from cecal tissue using TRIzol followed by the Qiagen RNeasy kit. PolyA enrichment was used to purify mRNA, which were then submitted for bulk sequencing. SRS20684619 RNAseq Control Mouse 3 Day 2 G1_09 RNA-Seq TRANSCRIPTOMIC PolyA Illumina NovaSeq 6000 SRX23865647 G1_10 SRP490782 PRJNA1078834 RNA was extracted from cecal tissue using TRIzol followed by the Qiagen RNeasy kit. PolyA enrichment was used to purify mRNA, which were then submitted for bulk sequencing. SRS20684623 RNAseq Control Mouse 4 Day 2 G1_10 RNA-Seq TRANSCRIPTOMIC PolyA Illumina NovaSeq 6000 SRX23865648 G2_17 SRP490782 PRJNA1078834 RNA was extracted from cecal tissue using TRIzol followed by the Qiagen RNeasy kit. PolyA enrichment was used to purify mRNA, which were then submitted for bulk sequencing. SRS20684621 RNAseq FMT Mouse 1 Day 2 G2_17 RNA-Seq TRANSCRIPTOMIC PolyA Illumina NovaSeq 6000 SRX23865649 G2_18 SRP490782 PRJNA1078834 RNA was extracted from cecal tissue using TRIzol followed by the Qiagen RNeasy kit. PolyA enrichment was used to purify mRNA, which were then submitted for bulk sequencing. SRS20684622 RNAseq FMT Mouse 2 Day 2 G2_18 RNA-Seq TRANSCRIPTOMIC PolyA Illumina NovaSeq 6000 SRX23865650 G2_19 SRP490782 PRJNA1078834 RNA was extracted from cecal tissue using TRIzol followed by the Qiagen RNeasy kit. PolyA enrichment was used to purify mRNA, which were then submitted for bulk sequencing. SRS20684624 RNAseq FMT Mouse 3 Day 2 G2_19 RNA-Seq TRANSCRIPTOMIC PolyA Illumina NovaSeq 6000 SRX23865651 G2_20 SRP490782 PRJNA1078834 RNA was extracted from cecal tissue using TRIzol followed by the Qiagen RNeasy kit. PolyA enrichment was used to purify mRNA, which were then submitted for bulk sequencing. SRS20684625 RNAseq FMT Mouse 4 Day 2 G2_20 RNA-Seq TRANSCRIPTOMIC PolyA Illumina NovaSeq 6000 SRX23865652 G3_27 SRP490782 PRJNA1078834 RNA was extracted from cecal tissue using TRIzol followed by the Qiagen RNeasy kit. PolyA enrichment was used to purify mRNA, which were then submitted for bulk sequencing. SRS20684627 RNAseq FMT Donor Mouse 1 Day 2 G3_27 RNA-Seq TRANSCRIPTOMIC PolyA Illumina NovaSeq 6000 SRX23865653 G3_28 SRP490782 PRJNA1078834 RNA was extracted from cecal tissue using TRIzol followed by the Qiagen RNeasy kit. PolyA enrichment was used to purify mRNA, which were then submitted for bulk sequencing. SRS20684626 RNAseq FMT Donor Mouse 2 Day 2 G3_28 RNA-Seq TRANSCRIPTOMIC PolyA Illumina NovaSeq 6000