<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT accession="SRX23867589" alias="GDM1_nanopore">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX23867589</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB14295871">GDM1_nanopore</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Nanopore sequencing of GDM-1 cell line</TITLE>
    <STUDY_REF accession="SRP493843">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP493843</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB14295871">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>DNA was extracted with the QIAamp DNA micro kit. Short fragments were removed with the PacBio SRE XS kit. Library preparation was performed with the ligation sequencing kit SQK-LSK114</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS20686542">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS20686542</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|etienne.sollier@dkfz-heidelberg.de">GDM1_nanopore</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>GDM1_nanopore</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <OXFORD_NANOPORE>
        <INSTRUMENT_MODEL>PromethION</INSTRUMENT_MODEL>
      </OXFORD_NANOPORE>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
