SRX858323 GSM1595963 SRP052956 SRS829998 GSM1595963 ChIP-Seq GENOMIC ChIP ChIP and amplification were performed according to the Affymetrix protocol as described (Carroll et al., 2005).Total input DNA was extracted from sonicated nuclei. Protein-DNA complexes were isolated with specific antibodies and protein A/G beads. The following antibodies were used for protein-DNA complexes isolation: anti-ETO antibody (sc9737 X) that recognizes AML1/ETO, anti-AML1 (C19) antibody (ab23980) that recognizes AML1, anti-AML1 (N20) antibody (sc8563 X) that recognizes both AML1/ETO and AML1. Libraries were prepared according to the Illumina genomic prep kit (Illumina, San Diego, CA, USA) Illumina Genome Analyzer II GEO Sample GSM1595963 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1595963 gds 301595963 GEO Accession GSM1595963 SRX858324 GSM1595964 SRP052956 SRS829999 GSM1595964 ChIP-Seq GENOMIC ChIP ChIP and amplification were performed according to the Affymetrix protocol as described (Carroll et al., 2005).Total input DNA was extracted from sonicated nuclei. Protein-DNA complexes were isolated with specific antibodies and protein A/G beads. The following antibodies were used for protein-DNA complexes isolation: anti-ETO antibody (sc9737 X) that recognizes AML1/ETO, anti-AML1 (C19) antibody (ab23980) that recognizes AML1, anti-AML1 (N20) antibody (sc8563 X) that recognizes both AML1/ETO and AML1. Libraries were prepared according to the Illumina genomic prep kit (Illumina, San Diego, CA, USA) Illumina Genome Analyzer II GEO Sample GSM1595964 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1595964 gds 301595964 GEO Accession GSM1595964 SRX858325 GSM1595965 SRP052956 SRS830000 GSM1595965 ChIP-Seq GENOMIC ChIP ChIP and amplification were performed according to the Affymetrix protocol as described (Carroll et al., 2005).Total input DNA was extracted from sonicated nuclei. Protein-DNA complexes were isolated with specific antibodies and protein A/G beads. The following antibodies were used for protein-DNA complexes isolation: anti-ETO antibody (sc9737 X) that recognizes AML1/ETO, anti-AML1 (C19) antibody (ab23980) that recognizes AML1, anti-AML1 (N20) antibody (sc8563 X) that recognizes both AML1/ETO and AML1. Libraries were prepared according to the Illumina genomic prep kit (Illumina, San Diego, CA, USA) Illumina Genome Analyzer II GEO Sample GSM1595965 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1595965 gds 301595965 GEO Accession GSM1595965 SRX858326 GSM1595966 SRP052956 SRS830001 GSM1595966 ChIP-Seq GENOMIC ChIP ChIP and amplification were performed according to the Affymetrix protocol as described (Carroll et al., 2005).Total input DNA was extracted from sonicated nuclei. Protein-DNA complexes were isolated with specific antibodies and protein A/G beads. The following antibodies were used for protein-DNA complexes isolation: anti-ETO antibody (sc9737 X) that recognizes AML1/ETO, anti-AML1 (C19) antibody (ab23980) that recognizes AML1, anti-AML1 (N20) antibody (sc8563 X) that recognizes both AML1/ETO and AML1. Libraries were prepared according to the Illumina genomic prep kit (Illumina, San Diego, CA, USA) Illumina Genome Analyzer II GEO Sample GSM1595966 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1595966 gds 301595966 GEO Accession GSM1595966 SRX952434 GSM1632640 SRP052956 SRS872591 GSM1632640 ChIP-Seq GENOMIC ChIP ChIP and amplification were performed according to the Affymetrix protocol as described (Carroll et al., 2005).Total input DNA was extracted from sonicated nuclei. Protein-DNA complexes were isolated with specific antibodies and protein A/G beads. The following antibodies were used for protein-DNA complexes isolation: anti-ETO antibody (sc9737 X) that recognizes AML1/ETO, anti-AML1 (C19) antibody (ab23980) that recognizes AML1, anti-AML1 (N20) antibody (sc8563 X) that recognizes both AML1/ETO and AML1. Libraries were prepared according to the Illumina genomic prep kit (Illumina, San Diego, CA, USA) Illumina Genome Analyzer II GEO Sample GSM1632640 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1632640 gds 301632640 GEO Accession GSM1632640 SRX952435 GSM1632641 SRP052956 SRS872590 GSM1632641 ChIP-Seq GENOMIC ChIP ChIP and amplification were performed according to the Affymetrix protocol as described (Carroll et al., 2005).Total input DNA was extracted from sonicated nuclei. Protein-DNA complexes were isolated with specific antibodies and protein A/G beads. The following antibodies were used for protein-DNA complexes isolation: anti-ETO antibody (sc9737 X) that recognizes AML1/ETO, anti-AML1 (C19) antibody (ab23980) that recognizes AML1, anti-AML1 (N20) antibody (sc8563 X) that recognizes both AML1/ETO and AML1. Libraries were prepared according to the Illumina genomic prep kit (Illumina, San Diego, CA, USA) Illumina Genome Analyzer II GEO Sample GSM1632641 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1632641 gds 301632641 GEO Accession GSM1632641