SRS913001 SAMN03490569 410661 mouse gut metagenome Mouse 004-2 that received clindamycin at 10 mg/kg with a 1-day recovery period collection_date 2013 description Mouse 004-2 that received clindamycin at 10 mg/kg with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 7300000 CFU/g of feces perturbation Clindamycin at 10 mg/kg with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 004-2 that received clindamycin at 10 mg/kg with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913002 SAMN03490568 410661 mouse gut metagenome Mouse 004-2 that received no antibiotics collection_date 2013 description Mouse 004-2 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 004-2 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913019 SAMN03490576 410661 mouse gut metagenome Mouse 007-2 that received no antibiotics collection_date 2013 description Mouse 007-2 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 007-2 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913029 SAMN03490586 410661 mouse gut metagenome Mouse 015-3 that received no antibiotics collection_date 2013 description Mouse 015-3 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 015-3 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913018 SAMN03490577 410661 mouse gut metagenome Mouse 007-2 that received vancomycin at 0.625 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 007-2 that received vancomycin at 0.625 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Vancomycin at 0.625 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 007-2 that received vancomycin at 0.625 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913031 SAMN03490598 410661 mouse gut metagenome Mouse 039-1 that received no antibiotics collection_date 2013 description Mouse 039-1 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 039-1 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913017 SAMN03490578 410661 mouse gut metagenome Mouse 007-357 that received no antibiotics collection_date 2013 description Mouse 007-357 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 007-357 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913033 SAMN03490596 410661 mouse gut metagenome Mouse 024-3 that received no antibiotics collection_date 2013 description Mouse 024-3 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 024-3 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913015 SAMN03490580 410661 mouse gut metagenome Mouse 007-358 that received no antibiotics collection_date 2013 description Mouse 007-358 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 007-358 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913035 SAMN03490594 410661 mouse gut metagenome Mouse 024-1 that received no antibiotics collection_date 2013 description Mouse 024-1 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 024-1 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913014 SAMN03490581 410661 mouse gut metagenome Mouse 007-358 that received vancomycin at 0.625 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 007-358 that received vancomycin at 0.625 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Vancomycin at 0.625 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 007-358 that received vancomycin at 0.625 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913037 SAMN03490602 410661 mouse gut metagenome Mouse 040-1 that received no antibiotics collection_date 2013 description Mouse 040-1 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 040-1 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913013 SAMN03490582 410661 mouse gut metagenome Mouse 015-1 that received no antibiotics collection_date 2013 description Mouse 015-1 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 015-1 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913039 SAMN03490600 410661 mouse gut metagenome Mouse 039-3 that received no antibiotics collection_date 2013 description Mouse 039-3 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 039-3 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913012 SAMN03490583 410661 mouse gut metagenome Mouse 015-1 that received ciprofloxacin at 10 mg/kg with a 1-day recovery period collection_date 2013 description Mouse 015-1 that received ciprofloxacin at 10 mg/kg with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Ciprofloxacin at 10 mg/kg with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 015-1 that received ciprofloxacin at 10 mg/kg with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913041 SAMN03490608 410661 mouse gut metagenome Mouse 040-4 that received no antibiotics collection_date 2013 description Mouse 040-4 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 040-4 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913011 SAMN03490579 410661 mouse gut metagenome Mouse 007-357 that received vancomycin at 0.625 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 007-357 that received vancomycin at 0.625 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Vancomycin at 0.625 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 007-357 that received vancomycin at 0.625 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913010 SAMN03490565 410661 mouse gut metagenome Mouse 002-1 that received no antibiotics collection_date 2013 description Mouse 002-1 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 002-1 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913009 SAMN03490566 410661 mouse gut metagenome Mouse 004-1 that received no antibiotics collection_date 2013 description Mouse 004-1 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 004-1 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913008 SAMN03490567 410661 mouse gut metagenome Mouse 004-1 that received clindamycin at 10 mg/kg with a 1-day recovery period collection_date 2013 description Mouse 004-1 that received clindamycin at 10 mg/kg with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 60000000 CFU/g of feces perturbation Clindamycin at 10 mg/kg with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 004-1 that received clindamycin at 10 mg/kg with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913007 SAMN03490570 410661 mouse gut metagenome Mouse 004-359 that received no antibiotics collection_date 2013 description Mouse 004-359 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 004-359 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913006 SAMN03490571 410661 mouse gut metagenome Mouse 004-359 that received clindamycin at 10 mg/kg with a 1-day recovery period collection_date 2013 description Mouse 004-359 that received clindamycin at 10 mg/kg with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 23300000 CFU/g of feces perturbation Clindamycin at 10 mg/kg with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 004-359 that received clindamycin at 10 mg/kg with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913048 SAMN03490606 410661 mouse gut metagenome Mouse 040-3 that received no antibiotics collection_date 2013 description Mouse 040-3 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 040-3 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913005 SAMN03490572 410661 mouse gut metagenome Mouse 004-4 that received no antibiotics collection_date 2013 description Mouse 004-4 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 004-4 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913050 SAMN03490604 410661 mouse gut metagenome Mouse 040-2 that received no antibiotics collection_date 2013 description Mouse 040-2 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 040-2 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913004 SAMN03490573 410661 mouse gut metagenome Mouse 004-4 that received clindamycin at 10 mg/kg with a 1-day recovery period collection_date 2013 description Mouse 004-4 that received clindamycin at 10 mg/kg with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 110000 CFU/g of feces perturbation Clindamycin at 10 mg/kg with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 004-4 that received clindamycin at 10 mg/kg with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913003 SAMN03490574 410661 mouse gut metagenome Mouse 007-1 that received no antibiotics collection_date 2013 description Mouse 007-1 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 007-1 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913028 SAMN03490589 410661 mouse gut metagenome Mouse 021-1 that received ampicillin at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 021-1 that received ampicillin at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 70000 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 021-1 that received ampicillin at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913027 SAMN03490590 410661 mouse gut metagenome Mouse 021-2 that received no antibiotics collection_date 2013 description Mouse 021-2 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 021-2 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913026 SAMN03490591 410661 mouse gut metagenome Mouse 021-3 that received no antibiotics collection_date 2013 description Mouse 021-3 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 021-3 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913056 SAMN03490622 410661 mouse gut metagenome Mouse 047-2 that received no antibiotics collection_date 2013 description Mouse 047-2 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 047-2 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913025 SAMN03490592 410661 mouse gut metagenome Mouse 021-4 that received no antibiotics collection_date 2013 description Mouse 021-4 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 021-4 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913058 SAMN03490620 410661 mouse gut metagenome Mouse 047-1 that received no antibiotics collection_date 2013 description Mouse 047-1 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 047-1 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913024 SAMN03490593 410661 mouse gut metagenome Mouse 021-4 that received ampicillin at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 021-4 that received ampicillin at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 2700 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 021-4 that received ampicillin at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913023 SAMN03490587 410661 mouse gut metagenome Mouse 015-3 that received ciprofloxacin at 10 mg/kg with a 1-day recovery period collection_date 2013 description Mouse 015-3 that received ciprofloxacin at 10 mg/kg with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Ciprofloxacin at 10 mg/kg with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 015-3 that received ciprofloxacin at 10 mg/kg with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913022 SAMN03490588 410661 mouse gut metagenome Mouse 021-1 that received no antibiotics collection_date 2013 description Mouse 021-1 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 021-1 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913062 SAMN03490624 410661 mouse gut metagenome Mouse 047-3 that received no antibiotics collection_date 2013 description Mouse 047-3 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 047-3 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913021 SAMN03490584 410661 mouse gut metagenome Mouse 015-2 that received no antibiotics collection_date 2013 description Mouse 015-2 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 015-2 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913020 SAMN03490575 410661 mouse gut metagenome Mouse 007-1 that received vancomycin at 0.625 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 007-1 that received vancomycin at 0.625 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Vancomycin at 0.625 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 007-1 that received vancomycin at 0.625 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913065 SAMN03490632 410661 mouse gut metagenome Mouse 050-2 that received no antibiotics collection_date 2013 description Mouse 050-2 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 050-2 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913030 SAMN03490585 410661 mouse gut metagenome Mouse 015-2 that received ciprofloxacin at 10 mg/kg with a 1-day recovery period collection_date 2013 description Mouse 015-2 that received ciprofloxacin at 10 mg/kg with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Ciprofloxacin at 10 mg/kg with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 015-2 that received ciprofloxacin at 10 mg/kg with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913067 SAMN03490630 410661 mouse gut metagenome Mouse 050-1 that received no antibiotics collection_date 2013 description Mouse 050-1 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 050-1 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913032 SAMN03490597 410661 mouse gut metagenome Mouse 024-3 that received cefoperazone at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 024-3 that received cefoperazone at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 78000000 CFU/g of feces perturbation Cefoperazone at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 024-3 that received cefoperazone at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913034 SAMN03490595 410661 mouse gut metagenome Mouse 024-1 that received cefoperazone at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 024-1 that received cefoperazone at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 34000000 CFU/g of feces perturbation Cefoperazone at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 024-1 that received cefoperazone at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913036 SAMN03490603 410661 mouse gut metagenome Mouse 040-1 that received metronidazole at 1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 040-1 that received metronidazole at 1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 116000000 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 040-1 that received metronidazole at 1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913071 SAMN03490636 410661 mouse gut metagenome Mouse 050-4 that received no antibiotics collection_date 2013 description Mouse 050-4 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 050-4 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913038 SAMN03490601 410661 mouse gut metagenome Mouse 039-3 that received vancomycin at 0.625 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 039-3 that received vancomycin at 0.625 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 36500000 CFU/g of feces perturbation Vancomycin at 0.625 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 039-3 that received vancomycin at 0.625 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913073 SAMN03490634 410661 mouse gut metagenome Mouse 050-3 that received no antibiotics collection_date 2013 description Mouse 050-3 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 050-3 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913040 SAMN03490599 410661 mouse gut metagenome Mouse 039-1 that received vancomycin at 0.625 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 039-1 that received vancomycin at 0.625 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Vancomycin at 0.625 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 039-1 that received vancomycin at 0.625 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913042 SAMN03490607 410661 mouse gut metagenome Mouse 040-3 that received metronidazole at 1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 040-3 that received metronidazole at 1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 134000000 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 040-3 that received metronidazole at 1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913076 SAMN03490642 410661 mouse gut metagenome Mouse 052-3 that received no antibiotics collection_date 2013 description Mouse 052-3 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 052-3 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913043 SAMN03490613 410661 mouse gut metagenome Mouse 042-4 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 042-4 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 65600000 CFU/g of feces perturbation Cefoperazone at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 042-4 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913078 SAMN03490639 410661 mouse gut metagenome Mouse 052-1 that received clindamycin at 10 mg/kg with a 1-day recovery period collection_date 2013 description Mouse 052-1 that received clindamycin at 10 mg/kg with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 57000000 CFU/g of feces perturbation Clindamycin at 10 mg/kg with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 052-1 that received clindamycin at 10 mg/kg with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913044 SAMN03490612 410661 mouse gut metagenome Mouse 042-3 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 042-3 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 38600000 CFU/g of feces perturbation Cefoperazone at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 042-3 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913080 SAMN03490647 410661 mouse gut metagenome Mouse 086-3 that received vancomycin at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 086-3 that received vancomycin at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 16900000 CFU/g of feces perturbation Vancomycin at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 086-3 that received vancomycin at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913045 SAMN03490611 410661 mouse gut metagenome Mouse 042-2 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 042-2 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 1110000 CFU/g of feces perturbation Cefoperazone at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 042-2 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913046 SAMN03490610 410661 mouse gut metagenome Mouse 042-1 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 042-1 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 76800000 CFU/g of feces perturbation Cefoperazone at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 042-1 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913047 SAMN03490609 410661 mouse gut metagenome Mouse 040-4 that received metronidazole at 1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 040-4 that received metronidazole at 1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 93000000 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 040-4 that received metronidazole at 1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913049 SAMN03490605 410661 mouse gut metagenome Mouse 040-2 that received metronidazole at 1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 040-2 that received metronidazole at 1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 121000000 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 040-2 that received metronidazole at 1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913051 SAMN03490617 410661 mouse gut metagenome Mouse 046-1 that received streptomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 046-1 that received streptomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 100 CFU/g of feces perturbation Streptomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 046-1 that received streptomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913052 SAMN03490616 410661 mouse gut metagenome Mouse 043-3 that received cefoperazone at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 043-3 that received cefoperazone at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 300 CFU/g of feces perturbation Cefoperazone at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 043-3 that received cefoperazone at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913054 SAMN03490614 410661 mouse gut metagenome Mouse 043-1 that received cefoperazone at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 043-1 that received cefoperazone at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Cefoperazone at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 043-1 that received cefoperazone at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913055 SAMN03490623 410661 mouse gut metagenome Mouse 047-2 that received streptomycin at 5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 047-2 that received streptomycin at 5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 73000000 CFU/g of feces perturbation Streptomycin at 5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 047-2 that received streptomycin at 5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913057 SAMN03490621 410661 mouse gut metagenome Mouse 047-1 that received streptomycin at 5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 047-1 that received streptomycin at 5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 72000000 CFU/g of feces perturbation Streptomycin at 5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 047-1 that received streptomycin at 5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913059 SAMN03490627 410661 mouse gut metagenome Mouse 048-2 that received streptomycin at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 048-2 that received streptomycin at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 3400000 CFU/g of feces perturbation Streptomycin at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 048-2 that received streptomycin at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913060 SAMN03490625 410661 mouse gut metagenome Mouse 047-3 that received streptomycin at 5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 047-3 that received streptomycin at 5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 27000000 CFU/g of feces perturbation Streptomycin at 5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 047-3 that received streptomycin at 5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913061 SAMN03490626 410661 mouse gut metagenome Mouse 048-1 that received streptomycin at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 048-1 that received streptomycin at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 1250000 CFU/g of feces perturbation Streptomycin at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 048-1 that received streptomycin at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913063 SAMN03490618 410661 mouse gut metagenome Mouse 046-2 that received streptomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 046-2 that received streptomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 100 CFU/g of feces perturbation Streptomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 046-2 that received streptomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913064 SAMN03490619 410661 mouse gut metagenome Mouse 046-3 that received streptomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 046-3 that received streptomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 4100 CFU/g of feces perturbation Streptomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 046-3 that received streptomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913066 SAMN03490631 410661 mouse gut metagenome Mouse 050-1 that received ampicillin at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 050-1 that received ampicillin at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 75000000 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 050-1 that received ampicillin at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913068 SAMN03490629 410661 mouse gut metagenome Mouse 048-4 that received streptomycin at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 048-4 that received streptomycin at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 5700000 CFU/g of feces perturbation Streptomycin at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 048-4 that received streptomycin at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913069 SAMN03490628 410661 mouse gut metagenome Mouse 048-3 that received streptomycin at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 048-3 that received streptomycin at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 4040000 CFU/g of feces perturbation Streptomycin at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 048-3 that received streptomycin at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913070 SAMN03490637 410661 mouse gut metagenome Mouse 050-4 that received ampicillin at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 050-4 that received ampicillin at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 120000 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 050-4 that received ampicillin at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913072 SAMN03490635 410661 mouse gut metagenome Mouse 050-3 that received ampicillin at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 050-3 that received ampicillin at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 35000000 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 050-3 that received ampicillin at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913074 SAMN03490633 410661 mouse gut metagenome Mouse 050-2 that received ampicillin at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 050-2 that received ampicillin at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 80000000 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 050-2 that received ampicillin at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913075 SAMN03490641 410661 mouse gut metagenome Mouse 052-2 that received clindamycin at 10 mg/kg with a 1-day recovery period collection_date 2013 description Mouse 052-2 that received clindamycin at 10 mg/kg with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 38000000 CFU/g of feces perturbation Clindamycin at 10 mg/kg with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 052-2 that received clindamycin at 10 mg/kg with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913077 SAMN03490640 410661 mouse gut metagenome Mouse 052-2 that received no antibiotics collection_date 2013 description Mouse 052-2 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 052-2 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913079 SAMN03490638 410661 mouse gut metagenome Mouse 052-1 that received no antibiotics collection_date 2013 description Mouse 052-1 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 052-1 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913081 SAMN03490646 410661 mouse gut metagenome Mouse 086-2 that received vancomycin at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 086-2 that received vancomycin at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 22700000 CFU/g of feces perturbation Vancomycin at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 086-2 that received vancomycin at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913082 SAMN03490645 410661 mouse gut metagenome Mouse 086-1 that received vancomycin at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 086-1 that received vancomycin at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 1110000 CFU/g of feces perturbation Vancomycin at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 086-1 that received vancomycin at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913083 SAMN03490644 410661 mouse gut metagenome Mouse 052-4 that received clindamycin at 10 mg/kg with a 1-day recovery period collection_date 2013 description Mouse 052-4 that received clindamycin at 10 mg/kg with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 86000000 CFU/g of feces perturbation Clindamycin at 10 mg/kg with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 052-4 that received clindamycin at 10 mg/kg with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913084 SAMN03490643 410661 mouse gut metagenome Mouse 052-3 that received clindamycin at 10 mg/kg with a 1-day recovery period collection_date 2013 description Mouse 052-3 that received clindamycin at 10 mg/kg with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 21000000 CFU/g of feces perturbation Clindamycin at 10 mg/kg with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 052-3 that received clindamycin at 10 mg/kg with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913085 SAMN03490650 410661 mouse gut metagenome Mouse 087-1 that received vancomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 087-1 that received vancomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 13600000 CFU/g of feces perturbation Vancomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 087-1 that received vancomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913086 SAMN03490653 410661 mouse gut metagenome Mouse 087-4 that received vancomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 087-4 that received vancomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 19600000 CFU/g of feces perturbation Vancomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 087-4 that received vancomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913110 SAMN03490678 410661 mouse gut metagenome Mouse 097-3 that received no antibiotics collection_date 2013 description Mouse 097-3 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 097-3 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913053 SAMN03490615 410661 mouse gut metagenome Mouse 043-2 that received cefoperazone at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 043-2 that received cefoperazone at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Cefoperazone at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 043-2 that received cefoperazone at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913112 SAMN03490676 410661 mouse gut metagenome Mouse 097-2 that received no antibiotics collection_date 2013 description Mouse 097-2 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 097-2 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913087 SAMN03490652 410661 mouse gut metagenome Mouse 087-3 that received vancomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 087-3 that received vancomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 14000000 CFU/g of feces perturbation Vancomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 087-3 that received vancomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913088 SAMN03490651 410661 mouse gut metagenome Mouse 087-2 that received vancomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 087-2 that received vancomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 19100000 CFU/g of feces perturbation Vancomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 087-2 that received vancomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913089 SAMN03490649 410661 mouse gut metagenome Mouse 086-5 that received vancomycin at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 086-5 that received vancomycin at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 22500000 CFU/g of feces perturbation Vancomycin at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 086-5 that received vancomycin at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913090 SAMN03490648 410661 mouse gut metagenome Mouse 086-4 that received vancomycin at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 086-4 that received vancomycin at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 16400000 CFU/g of feces perturbation Vancomycin at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 086-4 that received vancomycin at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913091 SAMN03490657 410661 mouse gut metagenome Mouse 088-4 that received streptomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 088-4 that received streptomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 2000 CFU/g of feces perturbation Streptomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 088-4 that received streptomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913092 SAMN03490656 410661 mouse gut metagenome Mouse 088-3 that received streptomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 088-3 that received streptomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Streptomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 088-3 that received streptomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913093 SAMN03490655 410661 mouse gut metagenome Mouse 088-2 that received streptomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 088-2 that received streptomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Streptomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 088-2 that received streptomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913094 SAMN03490654 410661 mouse gut metagenome Mouse 088-1 that received streptomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 088-1 that received streptomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Streptomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 088-1 that received streptomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913095 SAMN03490662 410661 mouse gut metagenome Mouse 089-5 that received streptomycin at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 089-5 that received streptomycin at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 3500000 CFU/g of feces perturbation Streptomycin at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 089-5 that received streptomycin at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913096 SAMN03490660 410661 mouse gut metagenome Mouse 089-3 that received streptomycin at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 089-3 that received streptomycin at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 4130000 CFU/g of feces perturbation Streptomycin at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 089-3 that received streptomycin at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913097 SAMN03490661 410661 mouse gut metagenome Mouse 089-4 that received streptomycin at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 089-4 that received streptomycin at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 1250000 CFU/g of feces perturbation Streptomycin at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 089-4 that received streptomycin at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913098 SAMN03490659 410661 mouse gut metagenome Mouse 089-2 that received streptomycin at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 089-2 that received streptomycin at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 1770000 CFU/g of feces perturbation Streptomycin at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 089-2 that received streptomycin at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913099 SAMN03490658 410661 mouse gut metagenome Mouse 089-1 that received streptomycin at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 089-1 that received streptomycin at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 2600000 CFU/g of feces perturbation Streptomycin at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 089-1 that received streptomycin at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913100 SAMN03490666 410661 mouse gut metagenome Mouse 091-1 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 091-1 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Cefoperazone at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 091-1 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913101 SAMN03490665 410661 mouse gut metagenome Mouse 090-3 that received cefoperazone at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 090-3 that received cefoperazone at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Cefoperazone at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 090-3 that received cefoperazone at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913102 SAMN03490664 410661 mouse gut metagenome Mouse 090-2 that received cefoperazone at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 090-2 that received cefoperazone at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Cefoperazone at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 090-2 that received cefoperazone at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913103 SAMN03490663 410661 mouse gut metagenome Mouse 090-1 that received cefoperazone at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 090-1 that received cefoperazone at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Cefoperazone at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 090-1 that received cefoperazone at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913104 SAMN03490672 410661 mouse gut metagenome Mouse 095-2 that received streptomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 095-2 that received streptomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Streptomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 095-2 that received streptomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913105 SAMN03490671 410661 mouse gut metagenome Mouse 095-1 that received streptomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 095-1 that received streptomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Streptomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 095-1 that received streptomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913106 SAMN03490670 410661 mouse gut metagenome Mouse 091-5 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 091-5 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Cefoperazone at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 091-5 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913107 SAMN03490669 410661 mouse gut metagenome Mouse 091-4 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 091-4 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Cefoperazone at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 091-4 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913108 SAMN03490668 410661 mouse gut metagenome Mouse 091-3 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 091-3 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Cefoperazone at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 091-3 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913109 SAMN03490667 410661 mouse gut metagenome Mouse 091-2 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 091-2 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Cefoperazone at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 091-2 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913111 SAMN03490677 410661 mouse gut metagenome Mouse 097-2 that received ciprofloxacin at 10 mg/kg with a 1-day recovery period collection_date 2013 description Mouse 097-2 that received ciprofloxacin at 10 mg/kg with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Ciprofloxacin at 10 mg/kg with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 097-2 that received ciprofloxacin at 10 mg/kg with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913113 SAMN03490675 410661 mouse gut metagenome Mouse 096-2 that received vancomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 096-2 that received vancomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 26400000 CFU/g of feces perturbation Vancomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 096-2 that received vancomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913114 SAMN03490681 410661 mouse gut metagenome Mouse 098-1 that received clindamycin at 10 mg/kg with a 1-day recovery period collection_date 2013 description Mouse 098-1 that received clindamycin at 10 mg/kg with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 30700000 CFU/g of feces perturbation Clindamycin at 10 mg/kg with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 098-1 that received clindamycin at 10 mg/kg with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913115 SAMN03490684 410661 mouse gut metagenome Mouse 098-3 that received no antibiotics collection_date 2013 description Mouse 098-3 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 098-3 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913116 SAMN03490683 410661 mouse gut metagenome Mouse 098-2 that received clindamycin at 10 mg/kg with a 1-day recovery period collection_date 2013 description Mouse 098-2 that received clindamycin at 10 mg/kg with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 34100000 CFU/g of feces perturbation Clindamycin at 10 mg/kg with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 098-2 that received clindamycin at 10 mg/kg with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913117 SAMN03490682 410661 mouse gut metagenome Mouse 098-2 that received no antibiotics collection_date 2013 description Mouse 098-2 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 098-2 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913118 SAMN03490680 410661 mouse gut metagenome Mouse 098-1 that received no antibiotics collection_date 2013 description Mouse 098-1 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 098-1 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913119 SAMN03490679 410661 mouse gut metagenome Mouse 097-3 that received ciprofloxacin at 10 mg/kg with a 1-day recovery period collection_date 2013 description Mouse 097-3 that received ciprofloxacin at 10 mg/kg with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Ciprofloxacin at 10 mg/kg with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 097-3 that received ciprofloxacin at 10 mg/kg with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913120 SAMN03490674 410661 mouse gut metagenome Mouse 096-1 that received vancomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 096-1 that received vancomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 13200000 CFU/g of feces perturbation Vancomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 096-1 that received vancomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913121 SAMN03490673 410661 mouse gut metagenome Mouse 095-3 that received streptomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 095-3 that received streptomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Streptomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 095-3 that received streptomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913122 SAMN03490688 410661 mouse gut metagenome Mouse 102-3 that received metronidazole at 1 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 102-3 that received metronidazole at 1 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 102-3 that received metronidazole at 1 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913123 SAMN03490687 410661 mouse gut metagenome Mouse 102-2 that received metronidazole at 1 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 102-2 that received metronidazole at 1 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 102-2 that received metronidazole at 1 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913124 SAMN03490691 410661 mouse gut metagenome Mouse 103-1 that received no antibiotics collection_date 2013 description Mouse 103-1 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 103-1 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913125 SAMN03490690 410661 mouse gut metagenome Mouse 102-5 that received metronidazole at 1 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 102-5 that received metronidazole at 1 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 102-5 that received metronidazole at 1 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913126 SAMN03490689 410661 mouse gut metagenome Mouse 102-4 that received metronidazole at 1 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 102-4 that received metronidazole at 1 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 300 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 102-4 that received metronidazole at 1 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913127 SAMN03490686 410661 mouse gut metagenome Mouse 102-1 that received metronidazole at 1 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 102-1 that received metronidazole at 1 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 1900 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 102-1 that received metronidazole at 1 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913128 SAMN03490685 410661 mouse gut metagenome Mouse 098-3 that received clindamycin at 10 mg/kg with a 1-day recovery period collection_date 2013 description Mouse 098-3 that received clindamycin at 10 mg/kg with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Clindamycin at 10 mg/kg with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 098-3 that received clindamycin at 10 mg/kg with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913129 SAMN03490695 410661 mouse gut metagenome Mouse 103-3 that received no antibiotics collection_date 2013 description Mouse 103-3 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 103-3 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913130 SAMN03490701 410661 mouse gut metagenome Mouse 106-1 that received ampicillin at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 106-1 that received ampicillin at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 23400000 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 106-1 that received ampicillin at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913131 SAMN03490700 410661 mouse gut metagenome Mouse 105-2 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 105-2 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 20000000 CFU/g of feces perturbation Cefoperazone at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 105-2 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913132 SAMN03490699 410661 mouse gut metagenome Mouse 105-1 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 105-1 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 13200000 CFU/g of feces perturbation Cefoperazone at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 105-1 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913133 SAMN03490698 410661 mouse gut metagenome Mouse 104-2 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 104-2 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 19100000 CFU/g of feces perturbation Cefoperazone at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 104-2 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913134 SAMN03490697 410661 mouse gut metagenome Mouse 104-1 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 104-1 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 3500000 CFU/g of feces perturbation Cefoperazone at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 104-1 that received cefoperazone at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913135 SAMN03490696 410661 mouse gut metagenome Mouse 103-3 that received metronidazole at 1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 103-3 that received metronidazole at 1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 43800000 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 103-3 that received metronidazole at 1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913136 SAMN03490694 410661 mouse gut metagenome Mouse 103-2 that received metronidazole at 1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 103-2 that received metronidazole at 1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 38300000 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 103-2 that received metronidazole at 1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913137 SAMN03490693 410661 mouse gut metagenome Mouse 103-2 that received no antibiotics collection_date 2013 description Mouse 103-2 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 103-2 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913138 SAMN03490692 410661 mouse gut metagenome Mouse 103-1 that received metronidazole at 1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 103-1 that received metronidazole at 1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 18300000 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 103-1 that received metronidazole at 1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913140 SAMN03490702 410661 mouse gut metagenome Mouse 107-1 that received metronidazole at 1 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 107-1 that received metronidazole at 1 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 107-1 that received metronidazole at 1 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913141 SAMN03490704 410661 mouse gut metagenome Mouse 108-1 that received metronidazole at 1 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 108-1 that received metronidazole at 1 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 100 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 108-1 that received metronidazole at 1 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913142 SAMN03490703 410661 mouse gut metagenome Mouse 107-3 that received metronidazole at 1 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 107-3 that received metronidazole at 1 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 300 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 107-3 that received metronidazole at 1 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913143 SAMN03490705 410661 mouse gut metagenome Mouse 108-2 that received metronidazole at 1 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 108-2 that received metronidazole at 1 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 108-2 that received metronidazole at 1 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913144 SAMN03490707 410661 mouse gut metagenome Mouse 109-2 that received ampicillin at 0.5 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 109-2 that received ampicillin at 0.5 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 1100 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 109-2 that received ampicillin at 0.5 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913145 SAMN03490706 410661 mouse gut metagenome Mouse 109-1 that received ampicillin at 0.5 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 109-1 that received ampicillin at 0.5 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 300 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 109-1 that received ampicillin at 0.5 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913146 SAMN03490710 410661 mouse gut metagenome Mouse 109-5 that received ampicillin at 0.5 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 109-5 that received ampicillin at 0.5 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 1540000 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 109-5 that received ampicillin at 0.5 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913147 SAMN03490713 410661 mouse gut metagenome Mouse 111-4 that received ampicillin at 0.5 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 111-4 that received ampicillin at 0.5 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 14500 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 111-4 that received ampicillin at 0.5 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913148 SAMN03490715 410661 mouse gut metagenome Mouse 116-2 that received metronidazole at 1 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 116-2 that received metronidazole at 1 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 116-2 that received metronidazole at 1 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913149 SAMN03490714 410661 mouse gut metagenome Mouse 116-1 that received metronidazole at 1 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 116-1 that received metronidazole at 1 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 116-1 that received metronidazole at 1 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913150 SAMN03490712 410661 mouse gut metagenome Mouse 111-3 that received ampicillin at 0.5 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 111-3 that received ampicillin at 0.5 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 2400 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 111-3 that received ampicillin at 0.5 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913151 SAMN03490711 410661 mouse gut metagenome Mouse 111-1 that received ampicillin at 0.5 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 111-1 that received ampicillin at 0.5 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 18600 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 111-1 that received ampicillin at 0.5 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913152 SAMN03490709 410661 mouse gut metagenome Mouse 109-4 that received ampicillin at 0.5 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 109-4 that received ampicillin at 0.5 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 4000 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 109-4 that received ampicillin at 0.5 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913153 SAMN03490708 410661 mouse gut metagenome Mouse 109-3 that received ampicillin at 0.5 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 109-3 that received ampicillin at 0.5 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 500 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 109-3 that received ampicillin at 0.5 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913154 SAMN03490721 410661 mouse gut metagenome Mouse 117-3 that received ampicillin at 0.5 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 117-3 that received ampicillin at 0.5 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 6900000 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 117-3 that received ampicillin at 0.5 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913155 SAMN03490722 410661 mouse gut metagenome Mouse 117-4 that received ampicillin at 0.5 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 117-4 that received ampicillin at 0.5 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 410000 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 117-4 that received ampicillin at 0.5 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913156 SAMN03490720 410661 mouse gut metagenome Mouse 117-2 that received ampicillin at 0.5 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 117-2 that received ampicillin at 0.5 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 1390000 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 117-2 that received ampicillin at 0.5 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913157 SAMN03490719 410661 mouse gut metagenome Mouse 117-1 that received ampicillin at 0.5 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 117-1 that received ampicillin at 0.5 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 5800000 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 117-1 that received ampicillin at 0.5 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913158 SAMN03490718 410661 mouse gut metagenome Mouse 116-5 that received metronidazole at 1 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 116-5 that received metronidazole at 1 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 1100 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 116-5 that received metronidazole at 1 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913159 SAMN03490717 410661 mouse gut metagenome Mouse 116-4 that received metronidazole at 1 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 116-4 that received metronidazole at 1 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 4600 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 116-4 that received metronidazole at 1 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913160 SAMN03490716 410661 mouse gut metagenome Mouse 116-3 that received metronidazole at 1 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 116-3 that received metronidazole at 1 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 200 CFU/g of feces perturbation Metronidazole at 1 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 116-3 that received metronidazole at 1 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913261 SAMN03490723 410661 mouse gut metagenome Mouse 117-5 that received ampicillin at 0.5 mg/ml with a 6-day recovery period collection_date 2013 description Mouse 117-5 that received ampicillin at 0.5 mg/ml with a 6-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 1700000 CFU/g of feces perturbation Ampicillin at 0.5 mg/mL with a 6-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 117-5 that received ampicillin at 0.5 mg/ml with a 6-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913264 SAMN03490724 410661 mouse gut metagenome Mouse 600-1 that received no antibiotics collection_date 2013 description Mouse 600-1 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 600-1 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913271 SAMN03490725 410661 mouse gut metagenome Mouse 600-1 that received cefoperazone at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 600-1 that received cefoperazone at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 73000000 CFU/g of feces perturbation Cefoperazone at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 600-1 that received cefoperazone at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913272 SAMN03490731 410661 mouse gut metagenome Mouse 627-1 that received no antibiotics collection_date 2013 description Mouse 627-1 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 627-1 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913273 SAMN03490730 410661 mouse gut metagenome Mouse 600-4 that received cefoperazone at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 600-4 that received cefoperazone at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 117000000 CFU/g of feces perturbation Cefoperazone at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 600-4 that received cefoperazone at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913274 SAMN03490729 410661 mouse gut metagenome Mouse 600-4 that received no antibiotics collection_date 2013 description Mouse 600-4 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 600-4 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913275 SAMN03490728 410661 mouse gut metagenome Mouse 600-3 that received cefoperazone at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 600-3 that received cefoperazone at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 229000000 CFU/g of feces perturbation Cefoperazone at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 600-3 that received cefoperazone at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913276 SAMN03490727 410661 mouse gut metagenome Mouse 600-3 that received no antibiotics collection_date 2013 description Mouse 600-3 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 600-3 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913277 SAMN03490726 410661 mouse gut metagenome Mouse 600-2 that received cefoperazone at 0.5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 600-2 that received cefoperazone at 0.5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 81500000 CFU/g of feces perturbation Cefoperazone at 0.5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 600-2 that received cefoperazone at 0.5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex female BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913278 SAMN03490736 410661 mouse gut metagenome Mouse 627-3 that received streptomycin at 5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 627-3 that received streptomycin at 5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 101000000 CFU/g of feces perturbation Streptomycin at 5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 627-3 that received streptomycin at 5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913279 SAMN03490735 410661 mouse gut metagenome Mouse 627-3 that received no antibiotics collection_date 2013 description Mouse 627-3 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 627-3 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913280 SAMN03490734 410661 mouse gut metagenome Mouse 627-2 that received streptomycin at 5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 627-2 that received streptomycin at 5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 34600000 CFU/g of feces perturbation Streptomycin at 5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 627-2 that received streptomycin at 5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913281 SAMN03490733 410661 mouse gut metagenome Mouse 627-2 that received no antibiotics collection_date 2013 description Mouse 627-2 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 627-2 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913282 SAMN03490741 410661 mouse gut metagenome Mouse 740-1 that received vancomycin at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 740-1 that received vancomycin at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 24400000 CFU/g of feces perturbation Vancomycin at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 740-1 that received vancomycin at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913283 SAMN03490740 410661 mouse gut metagenome Mouse 627-5 that received streptomycin at 5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 627-5 that received streptomycin at 5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 70000000 CFU/g of feces perturbation Streptomycin at 5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 627-5 that received streptomycin at 5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913284 SAMN03490739 410661 mouse gut metagenome Mouse 627-5 that received no antibiotics collection_date 2013 description Mouse 627-5 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 627-5 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913285 SAMN03490738 410661 mouse gut metagenome Mouse 627-4 that received streptomycin at 5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 627-4 that received streptomycin at 5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 57000000 CFU/g of feces perturbation Streptomycin at 5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 627-4 that received streptomycin at 5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913286 SAMN03490737 410661 mouse gut metagenome Mouse 627-4 that received no antibiotics collection_date 2013 description Mouse 627-4 that received no antibiotics diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 0 CFU/g of feces perturbation No antibiotics samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 627-4 that received no antibiotics seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913287 SAMN03490732 410661 mouse gut metagenome Mouse 627-1 that received streptomycin at 5 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 627-1 that received streptomycin at 5 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 34000000 CFU/g of feces perturbation Streptomycin at 5 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 627-1 that received streptomycin at 5 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913288 SAMN03490746 410661 mouse gut metagenome Mouse 741-3 that received vancomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 741-3 that received vancomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 13900000 CFU/g of feces perturbation Vancomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 741-3 that received vancomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913289 SAMN03490745 410661 mouse gut metagenome Mouse 741-2 that received vancomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 741-2 that received vancomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 20500000 CFU/g of feces perturbation Vancomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 741-2 that received vancomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913290 SAMN03490744 410661 mouse gut metagenome Mouse 741-1 that received vancomycin at 0.1 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 741-1 that received vancomycin at 0.1 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 11000000 CFU/g of feces perturbation Vancomycin at 0.1 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 741-1 that received vancomycin at 0.1 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913291 SAMN03490743 410661 mouse gut metagenome Mouse 740-3 that received vancomycin at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 740-3 that received vancomycin at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 26400000 CFU/g of feces perturbation Vancomycin at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 740-3 that received vancomycin at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS913292 SAMN03490742 410661 mouse gut metagenome Mouse 740-2 that received vancomycin at 0.3 mg/ml with a 1-day recovery period collection_date 2013 description Mouse 740-2 that received vancomycin at 0.3 mg/ml with a 1-day recovery period diet LabDiet 5001 env_biome mouse gut env_feature feces env_material feces genotype C57BL/6 geo_loc_name USA: Michigan, Ann Arbor host Mus musculus lat_lon 42.2820973 N 83.7338904 W organism mouse gut metagenome organism_count Clostridium difficile; 24000000 CFU/g of feces perturbation Vancomycin at 0.3 mg/mL with a 1-day recovery period samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mouse 740-2 that received vancomycin at 0.3 mg/ml with a 1-day recovery period seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex male BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS914956 SAMN03490751 1235509 synthetic metagenome Mock community sample 6 collection_date 2013 description Mock community sample 6 diet NA env_biome synthetic env_feature genomic DNA env_material genomic DNA genotype NA geo_loc_name USA: Michigan, Ann Arbor host NA lat_lon 42.2820973 N 83.7338904 W organism sythetic metagenome organism_count NA perturbation NA samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mock community sample 6 seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex NA BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS914957 SAMN03490750 1235509 synthetic metagenome Mock community sample 5 collection_date 2013 description Mock community sample 5 diet NA env_biome synthetic env_feature genomic DNA env_material genomic DNA genotype NA geo_loc_name USA: Michigan, Ann Arbor host NA lat_lon 42.2820973 N 83.7338904 W organism sythetic metagenome organism_count NA perturbation NA samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mock community sample 5 seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex NA BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS914958 SAMN03490749 1235509 synthetic metagenome Mock community sample 4 collection_date 2013 description Mock community sample 4 diet NA env_biome synthetic env_feature genomic DNA env_material genomic DNA genotype NA geo_loc_name USA: Michigan, Ann Arbor host NA lat_lon 42.2820973 N 83.7338904 W organism sythetic metagenome organism_count NA perturbation NA samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mock community sample 4 seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex NA BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS914959 SAMN03490748 1235509 synthetic metagenome Mock community sample 3 collection_date 2013 description Mock community sample 3 diet NA env_biome synthetic env_feature genomic DNA env_material genomic DNA genotype NA geo_loc_name USA: Michigan, Ann Arbor host NA lat_lon 42.2820973 N 83.7338904 W organism sythetic metagenome organism_count NA perturbation NA samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mock community sample 3 seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex NA BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS914960 SAMN03490747 1235509 synthetic metagenome Mock community sample 2 collection_date 2013 description Mock community sample 2 diet NA env_biome synthetic env_feature genomic DNA env_material genomic DNA genotype NA geo_loc_name USA: Michigan, Ann Arbor host NA lat_lon 42.2820973 N 83.7338904 W organism sythetic metagenome organism_count NA perturbation NA samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mock community sample 2 seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex NA BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS914961 SAMN03490753 1235509 synthetic metagenome Mock community sample 9 collection_date 2013 description Mock community sample 9 diet NA env_biome synthetic env_feature genomic DNA env_material genomic DNA genotype NA geo_loc_name USA: Michigan, Ann Arbor host NA lat_lon 42.2820973 N 83.7338904 W organism sythetic metagenome organism_count NA perturbation NA samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mock community sample 9 seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex NA BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated SRS914962 SAMN03490752 1235509 synthetic metagenome Mock community sample 8 collection_date 2013 description Mock community sample 8 diet NA env_biome synthetic env_feature genomic DNA env_material genomic DNA genotype NA geo_loc_name USA: Michigan, Ann Arbor host NA lat_lon 42.2820973 N 83.7338904 W organism sythetic metagenome organism_count NA perturbation NA samp_mat_process http://www.mobio.com/images/custom/file/protocol/12955.pdf samp_store_temp -80 C sample_title Mock community sample 8 seq_methods http://www.mothur.org/w/images/0/0c/Wet-lab_MiSeq_SOP.pdf sex NA BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.host-associated