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<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="M.fluviatilis-FB" accession="SRX1007807" center_name="CSIRO">
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      <PRIMARY_ID>SRX1007807</PRIMARY_ID>
      <SUBMITTER_ID namespace="CSIRO">M.fluviatilis-FB</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Melanotaenia fluviatilis adult female brain mRNA sequencing</TITLE>
    <STUDY_REF accession="SRP057622">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP057622</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA from whole brain was purified using the RNeasy® Lipid Tissue Kit (QIAGEN Pty. Ltd., Australia). On-column DNase treatments were included during purification. RNA integrity was confirmed using the Bioanalzyer 2100 (Agilent). Sequencing was undertaken by a service provider (Australian Genome Research Facility, Melbourne, Australia). Library preparation was performed using Illumina TruSeq reagents and sequencing was conducted using the HiSeq2000 platform. Briefly, RNA quality was determined using a Bioanalyzer 2100 (Agilent) before isolation of polyA+ mRNA, fragmentation, and construction of cDNA libraries using the Illumina TruSeq kit according to the standard protocol. 100-cycle paired-end sequencing was undertaken using two lanes of an Illumina HiSeq2000 instrument, with three libraries multiplexed per lane.</DESIGN_DESCRIPTION>
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        <IDENTIFIERS>
          <PRIMARY_ID>SRS920684</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
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        <LIBRARY_NAME>FB</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PolyA</LIBRARY_SELECTION>
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        </LIBRARY_LAYOUT>
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            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Reverse</READ_TYPE>
            <BASE_COORD>101</BASE_COORD>
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      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
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  <EXPERIMENT alias="M.fluviatilis-FG" accession="SRX1007829" center_name="CSIRO">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1007829</PRIMARY_ID>
      <SUBMITTER_ID namespace="CSIRO">M.fluviatilis-FG</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Melanotaenia fluviatilis adult ovary mRNA sequencing</TITLE>
    <STUDY_REF accession="SRP057622">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP057622</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA was purified from approximately 15 mg ovary tissue using the RNeasy® Mini Kit (QIAGEN Pty. Ltd., Australia). Total RNA from whole brain was purified using the RNeasy® Lipid Tissue Kit (QIAGEN Pty. Ltd., Australia). On-column DNase treatments were included during purification. RNA integrity was confirmed using the Bioanalzyer 2100 (Agilent). Sequencing was undertaken by a service provider (Australian Genome Research Facility, Melbourne, Australia). Library preparation was performed using Illumina TruSeq reagents and sequencing was conducted using the HiSeq2000 platform. Briefly, RNA quality was determined using a Bioanalyzer 2100 (Agilent) before isolation of polyA+ mRNA, fragmentation, and construction of cDNA libraries using the Illumina TruSeq kit according to the standard protocol. 100-cycle paired-end sequencing was undertaken using two lanes of an Illumina HiSeq2000 instrument, with three libraries multiplexed per lane.</DESIGN_DESCRIPTION>
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        <IDENTIFIERS>
          <PRIMARY_ID>SRS920704</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>FG</LIBRARY_NAME>
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        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PolyA</LIBRARY_SELECTION>
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          <PAIRED NOMINAL_LENGTH="300" NOMINAL_SDEV="0.0E0"/>
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          <SPOT_LENGTH>200</SPOT_LENGTH>
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            <BASE_COORD>1</BASE_COORD>
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            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
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      </SPOT_DESCRIPTOR>
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    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
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  <EXPERIMENT alias="M.fluviatilis-FL" accession="SRX1007830" center_name="CSIRO">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1007830</PRIMARY_ID>
      <SUBMITTER_ID namespace="CSIRO">M.fluviatilis-FL</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Melanotaenia fluviatilis female liver mRNA sequencing</TITLE>
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      <IDENTIFIERS>
        <PRIMARY_ID>SRP057622</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA was purified from approximately 15 mg liver tissue using the RNeasy® Mini Kit (QIAGEN Pty. Ltd., Australia). Total RNA from whole brain was purified using the RNeasy® Lipid Tissue Kit (QIAGEN Pty. Ltd., Australia). On-column DNase treatments were included during purification. RNA integrity was confirmed using the Bioanalzyer 2100 (Agilent). Sequencing was undertaken by a service provider (Australian Genome Research Facility, Melbourne, Australia). Library preparation was performed using Illumina TruSeq reagents and sequencing was conducted using the HiSeq2000 platform. Briefly, RNA quality was determined using a Bioanalyzer 2100 (Agilent) before isolation of polyA+ mRNA, fragmentation, and construction of cDNA libraries using the Illumina TruSeq kit according to the standard protocol. 100-cycle paired-end sequencing was undertaken using two lanes of an Illumina HiSeq2000 instrument, with three libraries multiplexed per lane.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS920705">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS920705</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN03566738</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>FL</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PolyA</LIBRARY_SELECTION>
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          <PAIRED NOMINAL_LENGTH="300" NOMINAL_SDEV="0.0E0"/>
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          <SPOT_LENGTH>200</SPOT_LENGTH>
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            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Reverse</READ_TYPE>
            <BASE_COORD>101</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
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    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="M.fluviatilis-MB" accession="SRX1007831" center_name="CSIRO">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1007831</PRIMARY_ID>
      <SUBMITTER_ID namespace="CSIRO">M.fluviatilis-MB</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Melanotaenia fluviatilis male brain mRNA sequencing</TITLE>
    <STUDY_REF accession="SRP057622">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP057622</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA from whole brain was purified using the RNeasy® Lipid Tissue Kit (QIAGEN Pty. Ltd., Australia). On-column DNase treatments were included during purification. RNA integrity was confirmed using the Bioanalzyer 2100 (Agilent). Sequencing was undertaken by a service provider (Australian Genome Research Facility, Melbourne, Australia). Library preparation was performed using Illumina TruSeq reagents and sequencing was conducted using the HiSeq2000 platform. Briefly, RNA quality was determined using a Bioanalyzer 2100 (Agilent) before isolation of polyA+ mRNA, fragmentation, and construction of cDNA libraries using the Illumina TruSeq kit according to the standard protocol. 100-cycle paired-end sequencing was undertaken using two lanes of an Illumina HiSeq2000 instrument, with three libraries multiplexed per lane.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS920706">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS920706</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MB</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PolyA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="300" NOMINAL_SDEV="0.0E0"/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>200</SPOT_LENGTH>
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            <READ_INDEX>1</READ_INDEX>
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      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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  </EXPERIMENT>
  <EXPERIMENT alias="M.fluviatilis-MG" accession="SRX1007832" center_name="CSIRO">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1007832</PRIMARY_ID>
      <SUBMITTER_ID namespace="CSIRO">M.fluviatilis-MG</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Melanotaenia fluviatilis testis mRNA sequencing</TITLE>
    <STUDY_REF accession="SRP057622">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP057622</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA was purified from approximately 15 mg ovary tissue using the RNeasy® Mini Kit (QIAGEN Pty. Ltd., Australia). Total RNA from whole brain was purified using the RNeasy® Lipid Tissue Kit (QIAGEN Pty. Ltd., Australia). On-column DNase treatments were included during purification. RNA integrity was confirmed using the Bioanalzyer 2100 (Agilent). Sequencing was undertaken by a service provider (Australian Genome Research Facility, Melbourne, Australia). Library preparation was performed using Illumina TruSeq reagents and sequencing was conducted using the HiSeq2000 platform. Briefly, RNA quality was determined using a Bioanalyzer 2100 (Agilent) before isolation of polyA+ mRNA, fragmentation, and construction of cDNA libraries using the Illumina TruSeq kit according to the standard protocol. 100-cycle paired-end sequencing was undertaken using two lanes of an Illumina HiSeq2000 instrument, with three libraries multiplexed per lane.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS920707">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS920707</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN03566740</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MG</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PolyA</LIBRARY_SELECTION>
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            <BASE_COORD>1</BASE_COORD>
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            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
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      </SPOT_DESCRIPTOR>
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    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
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  </EXPERIMENT>
  <EXPERIMENT alias="M.fluviatilis-ML" accession="SRX1007833" center_name="CSIRO">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1007833</PRIMARY_ID>
      <SUBMITTER_ID namespace="CSIRO">M.fluviatilis-ML</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Melanotaenia fluviatilis male liver mRNA sequencing</TITLE>
    <STUDY_REF accession="SRP057622">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP057622</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA was purified from approximately 15 mg liver tissue using the RNeasy® Mini Kit (QIAGEN Pty. Ltd., Australia). On-column DNase treatments were included during purification.  RNA integrity was confirmed using the Bioanalzyer 2100 (Agilent). Sequencing was undertaken by a service provider (Australian Genome Research Facility, Melbourne, Australia). Library preparation was performed using Illumina TruSeq reagents and sequencing was conducted using the HiSeq2000 platform. Briefly, RNA quality was determined using a Bioanalyzer 2100 (Agilent) before isolation of polyA+ mRNA, fragmentation, and construction of cDNA libraries using the Illumina TruSeq kit according to the standard protocol. 100-cycle paired-end sequencing was undertaken using two lanes of an Illumina HiSeq2000 instrument, with three libraries multiplexed per lane.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS920708">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS920708</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>ML</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
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        <LIBRARY_SELECTION>PolyA</LIBRARY_SELECTION>
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            <READ_INDEX>1</READ_INDEX>
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      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
</EXPERIMENT_SET>
