<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="Vlaspik_PI197088" accession="SRX1039972" center_name="Michigan State University">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1039972</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_PI197088</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_MSU1_1dpi_mRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA285071</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with Pseudoperonospora cubensis at 1 day post inoculation. The reads are from one biological replicate of an mRNA Seq experiment.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS946739">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS946739</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN03734820</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_1_June</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_MSU1_1dpi_mRNA_BioRep2" accession="SRX1040076" center_name="Michigan State University">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1040076</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_MSU1_1dpi_mRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_MSU1_1dpi_mRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS946739">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS946739</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_1_Sept</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_1dpi_sRNA_BioRep1" accession="SRX1040140" center_name="Michigan State University">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1040140</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_1dpi_sRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_1dpi_sRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with Pseudoperonospora cubensis at 1 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS946739">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS946739</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_1dpi_June_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_1dpi_sRNA_BioRep2" accession="SRX1043141">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043141</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_1dpi_sRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_1dpi_sRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with Pseudoperonospora cubensis at 1 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS946739">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS946739</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_1dpi_Sept_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_2dpi_mRNA_BioRep1" accession="SRX1043432">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043432</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_2dpi_mRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_2dpi_mRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with Pseudoperonospora cubensis at 2 day post inoculation. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS948906">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS948906</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_2_June</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_2dpi_mRNA_BioRep2" accession="SRX1043433">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043433</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_2dpi_mRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_2dpi_mRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS948906">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS948906</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_2_Sept</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_2dpi_sRNA_BioRep1" accession="SRX1043436">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043436</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_2dpi_sRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_2dpi_sRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with Pseudoperonospora cubensis at 2 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS948906">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS948906</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_2_June_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_2dpi_sRNA_BioRep2" accession="SRX1043437">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043437</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_2dpi_sRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_2dpi_sRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with Pseudoperonospora cubensis at 2 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS948906">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS948906</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_2_Sept_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_3dpi_mRNA_BioRep1" accession="SRX1043663">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043663</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_3dpi_mRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_3dpi_mRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with Pseudoperonospora cubensis at 3 day post inoculation. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949169">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949169</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_3_June</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_3dpi_mRNA_BioRep2" accession="SRX1043666">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043666</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_3dpi_mRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_3dpi_mRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with Pseudoperonospora cubensis at 3 day post inoculation. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949169">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949169</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_3_Sept</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_3dpi_sRNA_BioRep1" accession="SRX1043669">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043669</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_3dpi_sRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_3dpi_sRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with Pseudoperonospora cubensis at 3 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949169">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949169</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_3_June_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_3dpi_sRNA_BioRep2" accession="SRX1043670">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043670</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_3dpi_sRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_3dpi_sRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with Pseudoperonospora cubensis at 3 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949169">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949169</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_3_Sept_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_4dpi_mRNA_BioRep1" accession="SRX1043672">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043672</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_4dpi_mRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_4dpi_mRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with Pseudoperonospora cubensis at 4 day post inoculation. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949171">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949171</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN03737501</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_4_June</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_4dpi_mRNA_BioRep2" accession="SRX1043673">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043673</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_4dpi_mRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_4dpi_mRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with Pseudoperonospora cubensis at 4 day post inoculation. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949171">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949171</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_4_Sept</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_4dpi_sRNA_BioRep1" accession="SRX1043685">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043685</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_4dpi_sRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_4dpi_sRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with Pseudoperonospora cubensis at 4 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949171">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949171</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_4_June_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_4dpi_sRNA_BioRep2" accession="SRX1043694">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043694</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_4dpi_sRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_4dpi_sRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with Pseudoperonospora cubensis at 4 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949171">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949171</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_4_Sept_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_6dpi_mRNA_BioRep1" accession="SRX1043697">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043697</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_6dpi_mRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_6dpi_mRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with Pseudoperonospora cubensis at 6 day post inoculation. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949183">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949183</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN03737502</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_6_June</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_6dpi_mRNA_BioRep2" accession="SRX1043699">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043699</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_6dpi_mRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_6dpi_mRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with Pseudoperonospora cubensis at 6 day post inoculation. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949183">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949183</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_6_Sept</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_6dpi_sRNA_BioRep1" accession="SRX1043700">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043700</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_6dpi_sRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_6dpi_sRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with Pseudoperonospora cubensis at 4 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949183">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949183</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_6_June_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_6dpi_sRNA_BioRep2" accession="SRX1043702">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043702</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_6dpi_sRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_6dpi_sRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with Pseudoperonospora cubensis at 6 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949183">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949183</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_6_Sept_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_Mock_mRNA_BioRep1" accession="SRX1043721">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043721</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_Mock_mRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_Mock_mRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with water. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949185">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949185</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN03737503</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_M_June</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_1dpi_mRNA_BioRep1" accession="SRX1043724">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043724</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_1dpi_mRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_1dpi_mRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 1907088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 1 day post inoculation. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949186">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949186</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN03737508</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_1_June</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_Mock_mRNA_BioRep2" accession="SRX1043727">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043727</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_Mock_mRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_Mock_mRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with water. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949185">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949185</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_M_Sept</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_Mock_sRNA_BioRep1" accession="SRX1043732">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043732</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_Mock_sRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_Mock_sRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with water. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949185">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949185</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_M_June_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="Vlaspik_Mock_sRNA_BioRep2" accession="SRX1043733">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043733</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">Vlaspik_Mock_sRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Vlaspik_Mock_sRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Vlaspik (cucumber) leaves inoculated with water. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949185">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949185</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlas_M_Sept_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 3000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_1dpi_mRNA_BioRep2" accession="SRX1043770">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043770</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_1dpi_mRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_1dpi_mRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 1907088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 1 day post inoculation. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949186">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949186</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_1_Sept</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_1dpi_sRNA_BioRep1" accession="SRX1043771">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043771</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_1dpi_sRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_1dpi_sRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 197088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 1 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949186">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949186</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_1_June_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_1dpi_sRNA_BioRep2" accession="SRX1043805">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043805</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_1dpi_sRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_1dpi_sRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 197088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 1 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949186">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949186</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_1_Sept_</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_2dpi_mRNA_BioRep1" accession="SRX1043809">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043809</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_2dpi_mRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_2dpi_mRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 1907088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 2 day post inoculation. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949270">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949270</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN03737509</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_2_June</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_2dpi_mRNA_BioRep2" accession="SRX1043825">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043825</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_2dpi_mRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_2dpi_mRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 1907088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 2 day post inoculation. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949270">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949270</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_2_Sept</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_2dpi_sRNA_BioRep1" accession="SRX1043827">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043827</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_2dpi_sRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_2dpi_sRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 197088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 2 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949270">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949270</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_2_June_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_2dpi_sRNA_BioRep2" accession="SRX1043832">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043832</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_2dpi_sRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_2dpi_sRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 197088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 2 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949270">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949270</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_2_Sept_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_3dpi_mRNA_BioRep1" accession="SRX1043833">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043833</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_3dpi_mRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_3dpi_mRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 1907088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 3 day post inoculation. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949291">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949291</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN03737510</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_3_June</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_3dpi_mRNA_BioRep2" accession="SRX1043840">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043840</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_3dpi_mRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_3dpi_mRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 1907088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 3 day post inoculation. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949291">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949291</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_3_Sept</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_3dpi_sRNA_BioRep1" accession="SRX1043843">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043843</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_3dpi_sRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_3dpi_sRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 197088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 3 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949291">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949291</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_3_June_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_3dpi_sRNA_BioRep2" accession="SRX1043844">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043844</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_3dpi_sRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_3dpi_sRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 197088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 3 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949291">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949291</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_3_Sept_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197988_4dpi_mRNA_BioRep1" accession="SRX1043847">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043847</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197988_4dpi_mRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197988_4dpi_mRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 1907088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 4 day post inoculation. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949298">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949298</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN03737511</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_4_June</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197988_4dpi_mRNA_BioRep2" accession="SRX1043872">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043872</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197988_4dpi_mRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197988_4dpi_mRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 1907088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 4 day post inoculation. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949298">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949298</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_4_Sept</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_4dpi_sRNA_BioRep1" accession="SRX1043879">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043879</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_4dpi_sRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_4dpi_sRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 197088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 4 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949298">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949298</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_4_June_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_4dpi_sRNA_BioRep2" accession="SRX1043880">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043880</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_4dpi_sRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_4dpi_sRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 197088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 4 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949298">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949298</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_4_Sept_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_6dpi_mRNA_BioRep1" accession="SRX1043885">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043885</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_6dpi_mRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_6dpi_mRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 1907088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 6 day post inoculation. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949330">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949330</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN03737512</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_6_June</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_6dpi_mRNA_BioRep2" accession="SRX1043889">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043889</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_6dpi_mRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_6dpi_mRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 1907088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 6 day post inoculation. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949330">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949330</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_6_Sept</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_6dpi_sRNA_BioRep1" accession="SRX1043891">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043891</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_6dpi_sRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_6dpi_sRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 197088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 6 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949330">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949330</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_6_June_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_6dpi_sRNA_BioRep2" accession="SRX1043893">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043893</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_6dpi_sRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_6dpi_sRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 197088 (cucumber) leaves inoculated with Pseudoperonospora cubensis at 6 day post inoculation. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949330">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949330</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_6_Sept_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_Mock_mRNA_BioRep1" accession="SRX1043896">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043896</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_Mock_mRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_Mock_mRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 1907088 (cucumber) leaves inoculated with water. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949337">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949337</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN03737504</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_Mock_June</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_Mock_mRNA_BioRep2" accession="SRX1043930">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043930</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_Mock_mRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_Mock_mRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 1907088 (cucumber) leaves inoculated with water. The reads are from one biological replicate of an RNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. Samples were prepared for sequencing using the Illumina TruSeq Stranded mRNA Library Preparation Kit LT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949337">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949337</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_Mock_Sept</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_Mock_sRNA_BioRep1" accession="SRX1043931">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043931</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_Mock_sRNA_BioRep1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_Mock_sRNA_BioRep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 197088 (cucumber) leaves inoculated with water. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949337">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949337</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_Mock_June_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PI197088_Mock_sRNA_BioRep2" accession="SRX1043932">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1043932</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">PI197088_Mock_sRNA_BioRep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PI197088_Mock_sRNA_BioRep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from PI 197088 (cucumber) leaves inoculated with water. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949337">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949337</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PI88_Mock_Sept_sRNA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="P.cubensis_sRNA" accession="SRX1044105">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1044105</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">P.cubensis_sRNA</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>P.cubensis_sRNA_Rep1</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Pseudoperonospora cubensis sporangia. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949542">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949542</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Pcub_sRNA_Rep1</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="P.cubensis_sRNA_Rep2" accession="SRX1044106">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1044106</PRIMARY_ID>
      <SUBMITTER_ID namespace="Michigan State University">P.cubensis_sRNA_Rep2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>P.cubensis_sRNA_Rep2</TITLE>
    <STUDY_REF accession="SRP058758">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP058758</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>These reads are from Pseudoperonospora cubensis sporangia. The reads are from one biological replicate of an sRNA Seq experiment. The samples were extracted using the Qiagen AllPrep DNA/RNA/miRNA Universal kit. The library was prepared using the Illumina TruSeq Small RNA Library Preparation Kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS949542">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS949542</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Pcub_sRNA_Rep2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>miRNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
