SRX1043898 GSM1700522 SRP058860 SRS949371 GSM1700522 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700522 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700522 gds 301700522 GEO Accession GSM1700522 SRX1043899 GSM1700523 SRP058860 SRS949370 GSM1700523 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700523 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700523 gds 301700523 GEO Accession GSM1700523 SRX1043900 GSM1700524 SRP058860 SRS949369 GSM1700524 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700524 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700524 gds 301700524 GEO Accession GSM1700524 SRX1043901 GSM1700525 SRP058860 SRS949368 GSM1700525 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700525 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700525 gds 301700525 GEO Accession GSM1700525 SRX1043902 GSM1700526 SRP058860 SRS949367 GSM1700526 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700526 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700526 gds 301700526 GEO Accession GSM1700526 SRX1043903 GSM1700527 SRP058860 SRS949366 GSM1700527 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700527 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700527 gds 301700527 GEO Accession GSM1700527 SRX1043904 GSM1700528 SRP058860 SRS949365 GSM1700528 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700528 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700528 gds 301700528 GEO Accession GSM1700528 SRX1043905 GSM1700529 SRP058860 SRS949364 GSM1700529 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700529 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700529 gds 301700529 GEO Accession GSM1700529 SRX1043906 GSM1700530 SRP058860 SRS949363 GSM1700530 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700530 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700530 gds 301700530 GEO Accession GSM1700530 SRX1043907 GSM1700531 SRP058860 SRS949362 GSM1700531 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700531 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700531 gds 301700531 GEO Accession GSM1700531 SRX1043908 GSM1700532 SRP058860 SRS949361 GSM1700532 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700532 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700532 gds 301700532 GEO Accession GSM1700532 SRX1043909 GSM1700533 SRP058860 SRS949360 GSM1700533 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700533 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700533 gds 301700533 GEO Accession GSM1700533 SRX1043910 GSM1700534 SRP058860 SRS949359 GSM1700534 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700534 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700534 gds 301700534 GEO Accession GSM1700534 SRX1043911 GSM1700535 SRP058860 SRS949358 GSM1700535 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700535 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700535 gds 301700535 GEO Accession GSM1700535 SRX1043912 GSM1700536 SRP058860 SRS949357 GSM1700536 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700536 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700536 gds 301700536 GEO Accession GSM1700536 SRX1043913 GSM1700537 SRP058860 SRS949356 GSM1700537 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700537 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700537 gds 301700537 GEO Accession GSM1700537 SRX1043914 GSM1700538 SRP058860 SRS949355 GSM1700538 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700538 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700538 gds 301700538 GEO Accession GSM1700538 SRX1043915 GSM1700539 SRP058860 SRS949354 GSM1700539 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700539 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700539 gds 301700539 GEO Accession GSM1700539 SRX1043916 GSM1700540 SRP058860 SRS949353 GSM1700540 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700540 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700540 gds 301700540 GEO Accession GSM1700540 SRX1043917 GSM1700541 SRP058860 SRS949352 GSM1700541 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700541 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700541 gds 301700541 GEO Accession GSM1700541 SRX1043918 GSM1700542 SRP058860 SRS949351 GSM1700542 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700542 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700542 gds 301700542 GEO Accession GSM1700542 SRX1043919 GSM1700543 SRP058860 SRS949350 GSM1700543 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700543 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700543 gds 301700543 GEO Accession GSM1700543 SRX1043920 GSM1700544 SRP058860 SRS949340 GSM1700544 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700544 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700544 gds 301700544 GEO Accession GSM1700544 SRX1043921 GSM1700545 SRP058860 SRS949349 GSM1700545 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700545 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700545 gds 301700545 GEO Accession GSM1700545 SRX1043922 GSM1700546 SRP058860 SRS949348 GSM1700546 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700546 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700546 gds 301700546 GEO Accession GSM1700546 SRX1043923 GSM1700547 SRP058860 SRS949347 GSM1700547 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700547 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700547 gds 301700547 GEO Accession GSM1700547 SRX1043924 GSM1700548 SRP058860 SRS949346 GSM1700548 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700548 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700548 gds 301700548 GEO Accession GSM1700548 SRX1043925 GSM1700549 SRP058860 SRS949345 GSM1700549 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700549 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700549 gds 301700549 GEO Accession GSM1700549 SRX1043926 GSM1700550 SRP058860 SRS949344 GSM1700550 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700550 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700550 gds 301700550 GEO Accession GSM1700550 SRX1043927 GSM1700551 SRP058860 SRS949343 GSM1700551 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700551 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700551 gds 301700551 GEO Accession GSM1700551 SRX1043928 GSM1700552 SRP058860 SRS949342 GSM1700552 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700552 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700552 gds 301700552 GEO Accession GSM1700552 SRX1043929 GSM1700553 SRP058860 SRS949341 GSM1700553 RNA-Seq TRANSCRIPTOMIC cDNA Total RNA was extracted using standard hot phenol procedure. rRNAs were depleted from total RNA using the RiboMinus Eukaryote System v2 (Life Technologies). Alternatively, total RNA was treated with Terminator 5'-Phosphate-Dependent Exonuclease (Epicentre) to digest all 5'-monophosphate-ended RNAs. Strand-specific total RNA-Seq libraries were prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina), starting from 125 ng of rRNA-depleted RNA or Terminator-treated RNA . Paired-end sequencing (2x50 nt) of the libraries was performed on a HiSeq 2500 sequencer. Illumina HiSeq 2500 GEO Sample GSM1700553 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1700553 gds 301700553 GEO Accession GSM1700553 SRX1046569 GSM1701906 SRP058860 SRS951337 GSM1701906 RNA-Seq TRANSCRIPTOMIC CAGE Total RNA was extracted using standard hot phenol procedure. CAGE-Seq libraries were constructed starting from 5 µg of total RNA. Illumina Genome Analyzer IIx GEO Sample GSM1701906 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1701906 gds 301701906 GEO Accession GSM1701906 SRX1046570 GSM1701907 SRP058860 SRS951336 GSM1701907 RNA-Seq TRANSCRIPTOMIC CAGE Total RNA was extracted using standard hot phenol procedure. CAGE-Seq libraries were constructed starting from 5 µg of total RNA. Illumina Genome Analyzer IIx GEO Sample GSM1701907 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1701907 gds 301701907 GEO Accession GSM1701907 SRX1046571 GSM1701908 SRP058860 SRS951335 GSM1701908 RNA-Seq TRANSCRIPTOMIC CAGE Total RNA was extracted using standard hot phenol procedure. CAGE-Seq libraries were constructed starting from 5 µg of total RNA. Illumina Genome Analyzer IIx GEO Sample GSM1701908 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1701908 gds 301701908 GEO Accession GSM1701908 SRX1046572 GSM1701909 SRP058860 SRS951334 GSM1701909 RNA-Seq TRANSCRIPTOMIC CAGE Total RNA was extracted using standard hot phenol procedure. CAGE-Seq libraries were constructed starting from 5 µg of total RNA. Illumina Genome Analyzer IIx GEO Sample GSM1701909 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1701909 gds 301701909 GEO Accession GSM1701909