SRX1050293 GSM1704487 GSM1704487: PC9 cells; Homo sapiens; RNA-Seq SRP059176 SRS954503 GSM1704487 RNA-Seq TRANSCRIPTOMIC cDNA RNA was harvested using Trizol reagent. Illumina TruSeq RNA Sample Prep Kit (Cat#FC-122-1001) was used with 1 ug of total RNA for the construction of sequencing libraries. RNA libraries were prepared for sequencing using standard Illumina protocols Illumina HiSeq 2000 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1704487 gds 301704487 GEO Accession GSM1704487 SRX1050294 GSM1704488 GSM1704488: PC9 cells treated with 0.1 uM gefitinib for 1 week; Homo sapiens; RNA-Seq SRP059176 SRS954502 GSM1704488 RNA-Seq TRANSCRIPTOMIC cDNA RNA was harvested using Trizol reagent. Illumina TruSeq RNA Sample Prep Kit (Cat#FC-122-1001) was used with 1 ug of total RNA for the construction of sequencing libraries. RNA libraries were prepared for sequencing using standard Illumina protocols Illumina HiSeq 2000 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1704488 gds 301704488 GEO Accession GSM1704488 SRX1050295 GSM1704489 GSM1704489: PC9 cells treated with hypoxia (1% O2) for 1 week; Homo sapiens; RNA-Seq SRP059176 SRS954501 GSM1704489 RNA-Seq TRANSCRIPTOMIC cDNA RNA was harvested using Trizol reagent. Illumina TruSeq RNA Sample Prep Kit (Cat#FC-122-1001) was used with 1 ug of total RNA for the construction of sequencing libraries. RNA libraries were prepared for sequencing using standard Illumina protocols Illumina HiSeq 2000 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1704489 gds 301704489 GEO Accession GSM1704489 SRX1050296 GSM1704490 GSM1704490: PC9 cells treated with 0.1 uM gefitinib in hypoxia for 1 week; Homo sapiens; RNA-Seq SRP059176 SRS954500 GSM1704490 RNA-Seq TRANSCRIPTOMIC cDNA RNA was harvested using Trizol reagent. Illumina TruSeq RNA Sample Prep Kit (Cat#FC-122-1001) was used with 1 ug of total RNA for the construction of sequencing libraries. RNA libraries were prepared for sequencing using standard Illumina protocols Illumina HiSeq 2000 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1704490 gds 301704490 GEO Accession GSM1704490 SRX1050297 GSM1704491 GSM1704491: PC9 gefitinib resistant cells; Homo sapiens; RNA-Seq SRP059176 SRS954498 GSM1704491 RNA-Seq TRANSCRIPTOMIC cDNA RNA was harvested using Trizol reagent. Illumina TruSeq RNA Sample Prep Kit (Cat#FC-122-1001) was used with 1 ug of total RNA for the construction of sequencing libraries. RNA libraries were prepared for sequencing using standard Illumina protocols Illumina HiSeq 2000 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1704491 gds 301704491 GEO Accession GSM1704491 SRX1050298 GSM1704492 GSM1704492: ALDH positive PC9 cells; Homo sapiens; RNA-Seq SRP059176 SRS954499 GSM1704492 RNA-Seq TRANSCRIPTOMIC cDNA RNA was harvested using Trizol reagent. Illumina TruSeq RNA Sample Prep Kit (Cat#FC-122-1001) was used with 1 ug of total RNA for the construction of sequencing libraries. RNA libraries were prepared for sequencing using standard Illumina protocols Illumina HiSeq 2000 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1704492 gds 301704492 GEO Accession GSM1704492