SRP060319 PRJNA288891 Comparative of transcriptome charaterization associated with the inhibitor treatment and the control The objectives of this study was to use high-throughput sequencing technology to generate comprehensive transcriptome profiles of D-xylonate production by G. oxydans NL71 at three different typical inhibitors (formate, furfural and PHB) of the production process, in order to understand the physiological responses associated with D-xylonate production in G. oxydans NL71 and especially to reveal mechanisms leading to the reduction of the fermentability. We then integrates the analysis of the differentially expressed genes detected in this work and identify key genes affecting D-xylonate production in different inhibitors. Gluconobacter oxydans strain:NL71