<STUDY_REF accession="SRP002422"> <IDENTIFIERS> <PRIMARY_ID>SRP002422</PRIMARY_ID> <EXTERNAL_ID namespace="dbgap">phs000247</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>LS454 sequencing of The Neonatal Microbiome and Necrotizing Enterocolitis 2887796932 fragment AMPLICON library</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS2234641"> <IDENTIFIERS> <PRIMARY_ID>SRS2234641</PRIMARY_ID> <EXTERNAL_ID namespace="phs000247">125799187</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>2887972941</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>800</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_LABEL>rRNA_primer</READ_LABEL> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE> <BASECALL read_group_tag="V3-V5" min_match="18" max_mismatch="0" match_edge="full">CCGTCAATTCMTTTRAGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="1"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> </EXPERIMENT> </EXPERIMENT

SRX1137392 503593 <STUDY_REF accession="SRP002422"> <IDENTIFIERS> <PRIMARY_ID>SRP002422</PRIMARY_ID> <EXTERNAL_ID namespace="dbgap">phs000247</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>LS454 sequencing of The Neonatal Microbiome and Necrotizing Enterocolitis 2887796932 fragment AMPLICON library</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS2234641"> <IDENTIFIERS> <PRIMARY_ID>SRS2234641</PRIMARY_ID> <EXTERNAL_ID namespace="phs000247">125799187</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>2887972941</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>800</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_LABEL>rRNA_primer</READ_LABEL> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE> <BASECALL read_group_tag="V3-V5" min_match="18" max_mismatch="0" match_edge="full">CCGTCAATTCMTTTRAGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="1"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> </EXPERIMENT> </EXPERIMENT_SET>