<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="PDS0627A" accession="SRX1254783">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1254783</PRIMARY_ID>
      <SUBMITTER_ID namespace="Texas A&amp;M University">PDS0627A</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Transcriptome from LDA Sensitive Bacillus subtilis Replicate 1</TITLE>
    <STUDY_REF accession="SRP063769">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP063769</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA295934</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA from PDS0627 was isolated. rRNA was removed with Ribo-Zero rRNA Removal Kit (Gram-Positive Bacteria) (Illumina). 50 bp single-end reads prepared using TruSeq Stranded Total RNA Kit (Illumina).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1072875">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1072875</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN04093820</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>627A</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PDS0627B" accession="SRX1254784">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1254784</PRIMARY_ID>
      <SUBMITTER_ID namespace="Texas A&amp;M University">PDS0627B</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Transcriptome from LDA Sensitive Bacillus subtilis Replicate 2</TITLE>
    <STUDY_REF accession="SRP063769">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP063769</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA from PDS0627 was isolated. rRNA was removed with Ribo-Zero rRNA Removal Kit (Gram-Positive Bacteria) (Illumina). 50 bp single-end reads prepared using TruSeq Stranded Total RNA Kit (Illumina).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1072875">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1072875</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>627B</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PDS0685A" accession="SRX1254785">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1254785</PRIMARY_ID>
      <SUBMITTER_ID namespace="Texas A&amp;M University">PDS0685A</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Transcriptome from LDA Resistant Bacillus subtilis Replicate 1</TITLE>
    <STUDY_REF accession="SRP063769">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP063769</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA from PDS0685 was isolated. rRNA was removed with Ribo-Zero rRNA Removal Kit (Gram-Positive Bacteria) (Illumina). 50 bp single-end reads prepared using TruSeq Stranded Total RNA Kit (Illumina).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1072876">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1072876</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN04093821</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>685A</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="PDS0685B" accession="SRX1254786">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1254786</PRIMARY_ID>
      <SUBMITTER_ID namespace="Texas A&amp;M University">PDS0685B</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Transcriptome from LDA Resistant Bacillus subtilis Replicate 2</TITLE>
    <STUDY_REF accession="SRP063769">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP063769</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA from PDS0685 was isolated. rRNA was removed with Ribo-Zero rRNA Removal Kit (Gram-Positive Bacteria) (Illumina). 50 bp single-end reads prepared using TruSeq Stranded Total RNA Kit (Illumina).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1072876">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1072876</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN04093821</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>685B</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>50</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
