<?xml version="1.0" encoding="UTF-8"?>
<STUDY_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <STUDY center_name="GEO" alias="GSE74126" accession="SRP064958">
    <IDENTIFIERS>
      <PRIMARY_ID>SRP064958</PRIMARY_ID>
      <EXTERNAL_ID namespace="BioProject" label="primary">PRJNA299119</EXTERNAL_ID>
      <EXTERNAL_ID namespace="GEO">GSE74126</EXTERNAL_ID>
    </IDENTIFIERS>
    <DESCRIPTOR>
      <STUDY_TITLE>Rapid and affordable genome-wide bisulfite DNA sequencing by XmaI-RRBS</STUDY_TITLE>
      <STUDY_TYPE existing_study_type="Other"/>
      <STUDY_ABSTRACT>We describe XmaI-RRBS method for rapid and affordable genome-wide DNA methylation analysis, with library preparation taking only four days and sequencing possible within four hours. Small sizes of the XmaI-RRBS libraries allow their multiplexing and sequencing on the benchtop high-throughput machines. Described here is the first RRBS protocol validated for the Ion Torrent Personal Genome Machine. Overall design: DNA from MCF7 cell line and 6 normal breast samples (total 7 samples) were subjected to reduced representation bisulfite sequencing analysis (XmaI-RRBS) by using Ion Torrent platform.</STUDY_ABSTRACT>
      <CENTER_PROJECT_NAME>GSE74126</CENTER_PROJECT_NAME>
    </DESCRIPTOR>
  </STUDY>
</STUDY_SET>
