<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="Coptotermes formosanus transcriptome" accession="SRX1526285">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1526285</PRIMARY_ID>
      <SUBMITTER_ID namespace="'Guangdong Entomological Institute'">Coptotermes formosanus transcriptome</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of Coptotermes formosanus: mixed castes</TITLE>
    <STUDY_REF accession="SRP068272">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP068272</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Coptotermes formosanus Shiraki is one of the most destructive wood-feeding termites. In order to obtain a more complete transcriptome for reference, a C. formosanus cDNA library was constructed using mixed RNA isolated from larva-workers, mature workers, pre-soldiers, mature soldiers, alates, and replacement reproductives. Based on the Illumina sequencing platform, the sequencing of this library generated 11,510,702 clean reads and 189,421 assembled unigenes.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1244185">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1244185</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>reference transcriptome of Coptotermes formosanus</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="125" NOMINAL_SDEV="0.0E0"/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>250</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Reverse</READ_TYPE>
            <BASE_COORD>126</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
