<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="Lonar Lake sediment" accession="SRX1655279">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1655279</PRIMARY_ID>
      <SUBMITTER_ID namespace="National Centre for Cell Science, Pune, India">Lonar Lake sediment</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Amplicon libaray preparation from Lonar Lake</TITLE>
    <STUDY_REF accession="SRP072202">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP072202</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total DNA was extracted in triplicate using PowerMax® Soil DNA Isolation Kit (Mobio, USA). And V3 region was amplified and processed on Ion Torrent platform PGM. Bioinformatics analysis of the Ion torrent se-quencing data The raw data obtained from Ion Torrent PGM se-quencing, was pre-processed by MOTHUR version 1.34.3 (Schloss et al., 2009) and further analysed in QIIME v1.7.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1366322">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1366322</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN04574072</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>0</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>5</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent PGM</INSTRUMENT_MODEL>
      </ION_TORRENT>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
