<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT accession="SRX1890827" alias="shControl-Dox R1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1890827</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB1658001">shControl-Dox R1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of homo sapiens: breast cancer SUM159PT cells</TITLE>
    <STUDY_REF accession="SRP077683">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP077683</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA327112</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA was isolated from shControl and shADAM12 SUM159PT cells ± doxycycline (n=3 for each condition) using the Qiagen RNeasy purification kit and on-column DNase I digestion according to the manufacturerÕs protocols. An NGS library was generated for each RNA sample using the Illumina TruSeq Library Prep kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1533812">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1533812</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05302431</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>shControl-Dox R1</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX1890828" alias="shControl-Dox R2">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1890828</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB1658001">shControl-Dox R2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of homo sapiens: breast cancer SUM159PT cells</TITLE>
    <STUDY_REF accession="SRP077683">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP077683</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA327112</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA was isolated from shControl and shADAM12 SUM159PT cells ± doxycycline (n=3 for each condition) using the Qiagen RNeasy purification kit and on-column DNase I digestion according to the manufacturerÕs protocols. An NGS library was generated for each RNA sample using the Illumina TruSeq Library Prep kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1533813">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1533813</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05302432</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>shControl-Dox R2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX1890829" alias="shADAM12+Dox R2">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1890829</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB1658001">shADAM12+Dox R2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of homo sapiens: breast cancer SUM159PT cells</TITLE>
    <STUDY_REF accession="SRP077683">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP077683</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA327112</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA was isolated from shControl and shADAM12 SUM159PT cells ± doxycycline (n=3 for each condition) using the Qiagen RNeasy purification kit and on-column DNase I digestion according to the manufacturerÕs protocols. An NGS library was generated for each RNA sample using the Illumina TruSeq Library Prep kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1533814">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1533814</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05302441</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>shADAM12+Dox R2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX1890830" alias="shADAM12+Dox R3">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1890830</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB1658001">shADAM12+Dox R3</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of homo sapiens: breast cancer SUM159PT cells</TITLE>
    <STUDY_REF accession="SRP077683">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP077683</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA327112</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA was isolated from shControl and shADAM12 SUM159PT cells ± doxycycline (n=3 for each condition) using the Qiagen RNeasy purification kit and on-column DNase I digestion according to the manufacturerÕs protocols. An NGS library was generated for each RNA sample using the Illumina TruSeq Library Prep kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1533815">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1533815</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05302442</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>shADAM12+Dox R3</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX1890831" alias="shControl-Dox R3">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1890831</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB1658001">shControl-Dox R3</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of homo sapiens: breast cancer SUM159PT cells</TITLE>
    <STUDY_REF accession="SRP077683">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP077683</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA327112</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA was isolated from shControl and shADAM12 SUM159PT cells ± doxycycline (n=3 for each condition) using the Qiagen RNeasy purification kit and on-column DNase I digestion according to the manufacturerÕs protocols. An NGS library was generated for each RNA sample using the Illumina TruSeq Library Prep kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1533816">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1533816</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05302433</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>shControl-Dox R3</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX1890832" alias="shControl+Dox R1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1890832</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB1658001">shControl+Dox R1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of homo sapiens: breast cancer SUM159PT cells</TITLE>
    <STUDY_REF accession="SRP077683">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP077683</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA327112</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA was isolated from shControl and shADAM12 SUM159PT cells ± doxycycline (n=3 for each condition) using the Qiagen RNeasy purification kit and on-column DNase I digestion according to the manufacturerÕs protocols. An NGS library was generated for each RNA sample using the Illumina TruSeq Library Prep kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1533817">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1533817</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05302434</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>shControl+Dox R1</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX1890833" alias="shControl+Dox R2">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1890833</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB1658001">shControl+Dox R2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of homo sapiens: breast cancer SUM159PT cells</TITLE>
    <STUDY_REF accession="SRP077683">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP077683</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA327112</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA was isolated from shControl and shADAM12 SUM159PT cells ± doxycycline (n=3 for each condition) using the Qiagen RNeasy purification kit and on-column DNase I digestion according to the manufacturerÕs protocols. An NGS library was generated for each RNA sample using the Illumina TruSeq Library Prep kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1533818">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1533818</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05302435</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>shControl+Dox R2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX1890834" alias="shControl+Dox R3">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1890834</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB1658001">shControl+Dox R3</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of homo sapiens: breast cancer SUM159PT cells</TITLE>
    <STUDY_REF accession="SRP077683">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP077683</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA327112</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA was isolated from shControl and shADAM12 SUM159PT cells ± doxycycline (n=3 for each condition) using the Qiagen RNeasy purification kit and on-column DNase I digestion according to the manufacturerÕs protocols. An NGS library was generated for each RNA sample using the Illumina TruSeq Library Prep kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1533819">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1533819</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05302436</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>shControl+Dox R3</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX1890835" alias="shADAM12-Dox R1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1890835</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB1658001">shADAM12-Dox R1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of homo sapiens: breast cancer SUM159PT cells</TITLE>
    <STUDY_REF accession="SRP077683">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP077683</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA327112</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA was isolated from shControl and shADAM12 SUM159PT cells ± doxycycline (n=3 for each condition) using the Qiagen RNeasy purification kit and on-column DNase I digestion according to the manufacturerÕs protocols. An NGS library was generated for each RNA sample using the Illumina TruSeq Library Prep kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1533820">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1533820</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05302437</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>shADAM12-Dox R1</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX1890836" alias="shADAM12-Dox R2">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1890836</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB1658001">shADAM12-Dox R2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of homo sapiens: breast cancer SUM159PT cells</TITLE>
    <STUDY_REF accession="SRP077683">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP077683</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA327112</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA was isolated from shControl and shADAM12 SUM159PT cells ± doxycycline (n=3 for each condition) using the Qiagen RNeasy purification kit and on-column DNase I digestion according to the manufacturerÕs protocols. An NGS library was generated for each RNA sample using the Illumina TruSeq Library Prep kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1533821">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1533821</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05302438</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>shADAM12-Dox R2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX1890837" alias="shADAM12-Dox R3">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1890837</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB1658001">shADAM12-Dox R3</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of homo sapiens: breast cancer SUM159PT cells</TITLE>
    <STUDY_REF accession="SRP077683">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP077683</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA327112</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA was isolated from shControl and shADAM12 SUM159PT cells ± doxycycline (n=3 for each condition) using the Qiagen RNeasy purification kit and on-column DNase I digestion according to the manufacturerÕs protocols. An NGS library was generated for each RNA sample using the Illumina TruSeq Library Prep kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1533822">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1533822</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05302439</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>shADAM12-Dox R3</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX1890838" alias="shADAM12+Dox R1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX1890838</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB1658001">shADAM12+Dox R1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of homo sapiens: breast cancer SUM159PT cells</TITLE>
    <STUDY_REF accession="SRP077683">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP077683</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA327112</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Total RNA was isolated from shControl and shADAM12 SUM159PT cells ± doxycycline (n=3 for each condition) using the Qiagen RNeasy purification kit and on-column DNase I digestion according to the manufacturerÕs protocols. An NGS library was generated for each RNA sample using the Illumina TruSeq Library Prep kit.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1533823">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1533823</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05302440</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>shADAM12+Dox R1</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
