SRX1985889 IL100052581_SN180_20150105_L5_experiment <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590574"> <IDENTIFIERS> <PRIMARY_ID>SRS1590574</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150671</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052581</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="382"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100046982_SN180_20140930_L4_experiment" accession="SRX1985894"> <IDENTIFIERS> <PRIMARY_ID>SRX1985894</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100046982_SN180_20140930_L4_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590577"> <IDENTIFIERS> <PRIMARY_ID>SRS1590577</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150650</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100046982</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="424"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052587_SN180_20150105_L7_experiment" accession="SRX1985916"> <IDENTIFIERS> <PRIMARY_ID>SRX1985916</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052587_SN180_20150105_L7_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590591"> <IDENTIFIERS> <PRIMARY_ID>SRS1590591</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150660</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052587</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="391"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100046992_SN180_20140930_L6_experiment" accession="SRX1986257"> <IDENTIFIERS> <PRIMARY_ID>SRX1986257</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100046992_SN180_20140930_L6_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590760"> <IDENTIFIERS> <PRIMARY_ID>SRS1590760</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150651</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100046992</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="420"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052575_SN180_20150105_L3_experiment" accession="SRX1986271"> <IDENTIFIERS> <PRIMARY_ID>SRX1986271</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052575_SN180_20150105_L3_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590774"> <IDENTIFIERS> <PRIMARY_ID>SRS1590774</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150659</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052575</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="394"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100046987_SN180_20140930_L5_experiment" accession="SRX1986283"> <IDENTIFIERS> <PRIMARY_ID>SRX1986283</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100046987_SN180_20140930_L5_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590779"> <IDENTIFIERS> <PRIMARY_ID>SRS1590779</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150662</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100046987</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="422"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052593_SN180_20150105_L7_experiment" accession="SRX1986300"> <IDENTIFIERS> <PRIMARY_ID>SRX1986300</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052593_SN180_20150105_L7_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590796"> <IDENTIFIERS> <PRIMARY_ID>SRS1590796</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150672</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052593</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="399"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052569_SN180_20150105_L1_experiment" accession="SRX1986303"> <IDENTIFIERS> <PRIMARY_ID>SRX1986303</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052569_SN180_20150105_L1_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590799"> <IDENTIFIERS> <PRIMARY_ID>SRS1590799</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150670</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052569</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="382"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052563_SN180_20150105_L1_experiment" accession="SRX1986305"> <IDENTIFIERS> <PRIMARY_ID>SRX1986305</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052563_SN180_20150105_L1_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590801"> <IDENTIFIERS> <PRIMARY_ID>SRS1590801</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150658</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052563</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="386"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100046977_SN180_20140930_L2_experiment" accession="SRX1986306"> <IDENTIFIERS> <PRIMARY_ID>SRX1986306</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100046977_SN180_20140930_L2_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590802"> <IDENTIFIERS> <PRIMARY_ID>SRS1590802</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150661</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100046977</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="426"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100046997_SN180_20140930_L7_experiment" accession="SRX1986458"> <IDENTIFIERS> <PRIMARY_ID>SRX1986458</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100046997_SN180_20140930_L7_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590849"> <IDENTIFIERS> <PRIMARY_ID>SRS1590849</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150663</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100046997</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="417"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052574_SN180_20150105_L3_experiment" accession="SRX1988388"> <IDENTIFIERS> <PRIMARY_ID>SRX1988388</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052574_SN180_20150105_L3_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1592280"> <IDENTIFIERS> <PRIMARY_ID>SRS1592280</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150804</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052574</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="379"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052591_SN180_20150105_L7_experiment" accession="SRX1988692"> <IDENTIFIERS> <PRIMARY_ID>SRX1988692</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052591_SN180_20150105_L7_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1592464"> <IDENTIFIERS> <PRIMARY_ID>SRS1592464</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150823</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052591</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="380"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052568_SN180_20150105_L1_experiment" accession="SRX1988693"> <IDENTIFIERS> <PRIMARY_ID>SRX1988693</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052568_SN180_20150105_L1_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1592465"> <IDENTIFIERS> <PRIMARY_ID>SRS1592465</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150809</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052568</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="382"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052585_SN180_20150105_L5_experiment" accession="SRX1988696"> <IDENTIFIERS> <PRIMARY_ID>SRX1988696</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052585_SN180_20150105_L5_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1592469"> <IDENTIFIERS> <PRIMARY_ID>SRS1592469</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150817</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052585</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="397"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052580_SN180_20150105_L5_experiment" accession="SRX1988697"> <IDENTIFIERS> <PRIMARY_ID>SRX1988697</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052580_SN180_20150105_L5_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1592470"> <IDENTIFIERS> <PRIMARY_ID>SRS1592470</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150810</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052580</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="401"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052567_SN7001163_20150202_L1_experiment" accession="SRX1988698"> <IDENTIFIERS> <PRIMARY_ID>SRX1988698</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052567_SN7001163_20150202_L1_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1592471"> <IDENTIFIERS> <PRIMARY_ID>SRS1592471</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150821</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052567</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="385"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052567_SN180_20150105_L1_experiment" accession="SRX1988699"> <IDENTIFIERS> <PRIMARY_ID>SRX1988699</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052567_SN180_20150105_L1_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1592471"> <IDENTIFIERS> <PRIMARY_ID>SRS1592471</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150821</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052567</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="385"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052592_SN180_20150105_L7_experiment" accession="SRX1988700"> <IDENTIFIERS> <PRIMARY_ID>SRX1988700</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052592_SN180_20150105_L7_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1592472"> <IDENTIFIERS> <PRIMARY_ID>SRS1592472</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150811</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052592</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="380"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052586_SN180_20150105_L7_experiment" accession="SRX1988701"> <IDENTIFIERS> <PRIMARY_ID>SRX1988701</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052586_SN180_20150105_L7_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1592474"> <IDENTIFIERS> <PRIMARY_ID>SRS1592474</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150805</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052586</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="381"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052562_SN180_20150105_L1_experiment" accession="SRX1988702"> <IDENTIFIERS> <PRIMARY_ID>SRX1988702</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052562_SN180_20150105_L1_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1592473"> <IDENTIFIERS> <PRIMARY_ID>SRS1592473</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150803</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052562</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="378"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100054425_SN7001163_20150216_L3_experiment" accession="SRX1988703"> <IDENTIFIERS> <PRIMARY_ID>SRX1988703</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100054425_SN7001163_20150216_L3_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1592476"> <IDENTIFIERS> <PRIMARY_ID>SRS1592476</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150815</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100054425</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="482"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052573_SN180_20150105_L3_experiment" accession="SRX1988704"> <IDENTIFIERS> <PRIMARY_ID>SRX1988704</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052573_SN180_20150105_L3_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1592475"> <IDENTIFIERS> <PRIMARY_ID>SRS1592475</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150816</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052573</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="370"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052579_SN180_20150105_L5_experiment" accession="SRX1988707"> <IDENTIFIERS> <PRIMARY_ID>SRX1988707</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052579_SN180_20150105_L5_experiment</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1592479"> <IDENTIFIERS> <PRIMARY_ID>SRS1592479</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150822</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052579</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="385"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052565_SN180_20150105_L1_experiment_human" accession="SRX2011657"> <IDENTIFIERS> <PRIMARY_ID>SRX2011657</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052565_SN180_20150105_L1_experiment_human</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590566"> <IDENTIFIERS> <PRIMARY_ID>SRS1590566</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150652</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052565</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="384"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052565_SN180_20150105_L1_experiment_fungal" accession="SRX2013576"> <IDENTIFIERS> <PRIMARY_ID>SRX2013576</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052565_SN180_20150105_L1_experiment_fungal</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1593557"> <IDENTIFIERS> <PRIMARY_ID>SRS1593557</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150806</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052565</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="384"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052577_SN180_20150105_L3_experiment_human" accession="SRX2017923"> <IDENTIFIERS> <PRIMARY_ID>SRX2017923</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052577_SN180_20150105_L3_experiment_human</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1589944"> <IDENTIFIERS> <PRIMARY_ID>SRS1589944</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150653</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052577</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="388"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052589_SN180_20150105_L7_experiment_human" accession="SRX2017924"> <IDENTIFIERS> <PRIMARY_ID>SRX2017924</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052589_SN180_20150105_L7_experiment_human</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590576"> <IDENTIFIERS> <PRIMARY_ID>SRS1590576</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150654</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052589</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="384"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052577_SN180_20150105_L3_experiment_fungal" accession="SRX2017925"> <IDENTIFIERS> <PRIMARY_ID>SRX2017925</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052577_SN180_20150105_L3_experiment_fungal</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1593555"> <IDENTIFIERS> <PRIMARY_ID>SRS1593555</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150807</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052577</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="388"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052589_SN180_20150105_L7_experiment_fungal" accession="SRX2017950"> <IDENTIFIERS> <PRIMARY_ID>SRX2017950</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052589_SN180_20150105_L7_experiment_fungal</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1593574"> <IDENTIFIERS> <PRIMARY_ID>SRS1593574</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150808</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052589</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="384"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052571_SN180_20150105_L3_experiment_human" accession="SRX2018147"> <IDENTIFIERS> <PRIMARY_ID>SRX2018147</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052571_SN180_20150105_L3_experiment_human</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590573"> <IDENTIFIERS> <PRIMARY_ID>SRS1590573</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150664</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052571</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="383"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052571_SN180_20150105_L3_experiment_fungal" accession="SRX2018176"> <IDENTIFIERS> <PRIMARY_ID>SRX2018176</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052571_SN180_20150105_L3_experiment_fungal</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1593558"> <IDENTIFIERS> <PRIMARY_ID>SRS1593558</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150812</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052571</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="383"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052583_SN180_20150105_L5_experiment_human" accession="SRX2018188"> <IDENTIFIERS> <PRIMARY_ID>SRX2018188</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052583_SN180_20150105_L5_experiment_human</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590797"> <IDENTIFIERS> <PRIMARY_ID>SRS1590797</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150665</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052583</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="387"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052595_SN180_20150121_L4_experiment_human" accession="SRX2018189"> <IDENTIFIERS> <PRIMARY_ID>SRX2018189</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052595_SN180_20150121_L4_experiment_human</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590595"> <IDENTIFIERS> <PRIMARY_ID>SRS1590595</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150666</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052595</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="390"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052595_SN180_20150121_L4_experiment_fungal" accession="SRX2018190"> <IDENTIFIERS> <PRIMARY_ID>SRX2018190</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052595_SN180_20150121_L4_experiment_fungal</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1593580"> <IDENTIFIERS> <PRIMARY_ID>SRS1593580</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150814</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052595</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="390"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052583_SN180_20150105_L5_experiment_fungal" accession="SRX2018191"> <IDENTIFIERS> <PRIMARY_ID>SRX2018191</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052583_SN180_20150105_L5_experiment_fungal</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1593582"> <IDENTIFIERS> <PRIMARY_ID>SRS1593582</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150813</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052583</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="387"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052564_SN180_20150105_L1_experiment_human" accession="SRX2018192"> <IDENTIFIERS> <PRIMARY_ID>SRX2018192</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052564_SN180_20150105_L1_experiment_human</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590848"> <IDENTIFIERS> <PRIMARY_ID>SRS1590848</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150655</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052564</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="387"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052564_SN180_20150105_L1_experiment_fungal" accession="SRX2018530"> <IDENTIFIERS> <PRIMARY_ID>SRX2018530</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052564_SN180_20150105_L1_experiment_fungal</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1593585"> <IDENTIFIERS> <PRIMARY_ID>SRS1593585</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150818</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052564</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="387"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052576_SN180_20150105_L3_experiment_human" accession="SRX2018559"> <IDENTIFIERS> <PRIMARY_ID>SRX2018559</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052576_SN180_20150105_L3_experiment_human</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590846"> <IDENTIFIERS> <PRIMARY_ID>SRS1590846</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150656</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052576</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="394"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052576_SN180_20150105_L3_experiment_fungal" accession="SRX2018560"> <IDENTIFIERS> <PRIMARY_ID>SRX2018560</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052576_SN180_20150105_L3_experiment_fungal</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1593584"> <IDENTIFIERS> <PRIMARY_ID>SRS1593584</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150819</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052576</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="394"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052588_SN180_20150105_L7_experiment_human" accession="SRX2018561"> <IDENTIFIERS> <PRIMARY_ID>SRX2018561</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052588_SN180_20150105_L7_experiment_human</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590596"> <IDENTIFIERS> <PRIMARY_ID>SRS1590596</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150657</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052588</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="399"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052588_SN180_20150105_L7_experiment_fungal" accession="SRX2018570"> <IDENTIFIERS> <PRIMARY_ID>SRX2018570</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052588_SN180_20150105_L7_experiment_fungal</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1593581"> <IDENTIFIERS> <PRIMARY_ID>SRS1593581</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150820</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052588</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="399"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052570_SN180_20150105_L3_experiment_human" accession="SRX2018571"> <IDENTIFIERS> <PRIMARY_ID>SRX2018571</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052570_SN180_20150105_L3_experiment_human</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590594"> <IDENTIFIERS> <PRIMARY_ID>SRS1590594</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150667</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052570</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="382"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052570_SN180_20150105_L3_experiment_fungal" accession="SRX2018671"> <IDENTIFIERS> <PRIMARY_ID>SRX2018671</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052570_SN180_20150105_L3_experiment_fungal</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1593579"> <IDENTIFIERS> <PRIMARY_ID>SRS1593579</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150824</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052570</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="382"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052582_SN180_20150105_L5_experiment_human" accession="SRX2018672"> <IDENTIFIERS> <PRIMARY_ID>SRX2018672</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052582_SN180_20150105_L5_experiment_human</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590847"> <IDENTIFIERS> <PRIMARY_ID>SRS1590847</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150668</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052582</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="393"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052582_SN180_20150105_L5_experiment_fungal" accession="SRX2018673"> <IDENTIFIERS> <PRIMARY_ID>SRX2018673</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052582_SN180_20150105_L5_experiment_fungal</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1593583"> <IDENTIFIERS> <PRIMARY_ID>SRS1593583</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150825</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052582</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="393"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052594_SN180_20150121_L4_experiment_human" accession="SRX2018674"> <IDENTIFIERS> <PRIMARY_ID>SRX2018674</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052594_SN180_20150121_L4_experiment_human</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1590575"> <IDENTIFIERS> <PRIMARY_ID>SRS1590575</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150669</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052594</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="390"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052594_SN7001163_20150113_L1_experiment_fungal" accession="SRX2018675"> <IDENTIFIERS> <PRIMARY_ID>SRX2018675</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052594_SN7001163_20150113_L1_experiment_fungal</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1593559"> <IDENTIFIERS> <PRIMARY_ID>SRS1593559</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150826</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052594</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="390"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100052594_SN180_20150121_L4_experiment_fungal" accession="SRX2018676"> <IDENTIFIERS> <PRIMARY_ID>SRX2018676</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100052594_SN180_20150121_L4_experiment_fungal</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1593559"> <IDENTIFIERS> <PRIMARY_ID>SRS1593559</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150826</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100052594</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="390"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT center_name="UMIGS" alias="IL100046972_SN180_20140930_L1_experiment_all" accession="SRX2034575"> <IDENTIFIERS> <PRIMARY_ID>SRX2034575</PRIMARY_ID> <SUBMITTER_ID namespace="UMIGS">IL100046972_SN180_20140930_L1_experiment_all</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP077731"> <IDENTIFIERS> <PRIMARY_ID>SRP077731</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA322482</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>An indexed, paired end RNAseq library was prepared.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS1534576"> <IDENTIFIERS> <PRIMARY_ID>SRS1534576</PRIMARY_ID> <EXTERNAL_ID namespace="BioSample">SAMN05150649</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>IL100046972</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_SDEV="0.0E0" NOMINAL_LENGTH="414"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>UMIGS-GRC Illumina Construction Protocol Details</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>202</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>102</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> </EXPERIMENT_SET>