<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="Cells 27 RNA-Seq 1" accession="SRX2007893">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2007893</PRIMARY_ID>
      <SUBMITTER_ID namespace="Charite Medical School Berlin">Cells 27 RNA-Seq 1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>uninfected HeLa cells 27 hpi</TITLE>
    <STUDY_REF accession="SRP075716">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP075716</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA322856</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>1 μg of uninfected total RNA (HeLa cells) were subjected to total RNA library generation using the TruSeq Stranded Total RNA Sample Prep Kit according to the manufacturer’s protocol (Illumina). Libraries were pooled and sequenced on a HiSeq 2000 platform (multiplexed SR 1x101+7 high output mode).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1606375">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1606375</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05520029</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Cells 27 RNA-Seq 1</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>DNase</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>101</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
