SRX2036013 Male_OregonR;AutW132_replicate_1 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629897 SAMN05596126 Male_OregonR;AutW132_replicate_1 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036014 Male_SiI;AutW132_replicate_1 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629898 SAMN05596127 Male_SiI;AutW132_replicate_1 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036015 Male_OregonR;OregonR_replicate_1 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629899 SAMN05596136 Male_OregonR;OregonR_replicate_1 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036016 Male_SiI;OregonR_replicate_1 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629900 SAMN05596137 Male_SiI;OregonR_replicate_1 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036017 Female_OregonR;OregonR_replicate_1 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629901 SAMN05596138 Female_OregonR;OregonR_replicate_1 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036018 Female_OregonR;OregonR_replicate_2 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629902 SAMN05596139 Female_OregonR;OregonR_replicate_2 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036019 Female_OregonR;OregonR_replicate_3 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629903 SAMN05596140 Female_OregonR;OregonR_replicate_3 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036020 Female_OregonR;AutW132_replicate_1 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629904 SAMN05596141 Female_OregonR;AutW132_replicate_1 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036021 Female_OregonR;AutW132_replicate_2 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629905 SAMN05596142 Female_OregonR;AutW132_replicate_2 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036022 Female_OregonR;AutW132_replicate_3 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629906 SAMN05596143 Female_OregonR;AutW132_replicate_3 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036023 Female_SiI;OregonR_replicate_1 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629907 SAMN05596144 Female_SiI;OregonR_replicate_1 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036024 Female_SiI;OregonR_replicate_2 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629908 SAMN05596145 Female_SiI;OregonR_replicate_2 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036025 Male_OregonR;OregonR_replicate_2 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629909 SAMN05596128 Male_OregonR;OregonR_replicate_2 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036026 Female_SiI;OregonR_replicate_3 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629910 SAMN05596146 Female_SiI;OregonR_replicate_3 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036027 Female_SiI;AutW132_replicate_1 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629911 SAMN05596147 Female_SiI;AutW132_replicate_1 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036028 Female_SiI;AutW132_replicate_3 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629912 SAMN05596148 Female_SiI;AutW132_replicate_3 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036029 Male_SiI;AutW132_replicate_2 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629913 SAMN05596129 Male_SiI;AutW132_replicate_2 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036030 Male_SiI;OregonR_replicate_2 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629914 SAMN05596130 Male_SiI;OregonR_replicate_2 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036031 Male_OregonR;AutW132_replicate_2 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629915 SAMN05596131 Male_OregonR;AutW132_replicate_2 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036032 Male_OregonR;OregonR_replicate_3 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629917 SAMN05596132 Male_OregonR;OregonR_replicate_3 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036033 Male_SiI;OregonR_replicate_3 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629918 SAMN05596133 Male_SiI;OregonR_replicate_3 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036034 Male_OregonR;AutW132_replicate_3 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629916 SAMN05596134 Male_OregonR;AutW132_replicate_3 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000 SRX2036035 Male_SiI;AutW132_replicate_3 SRP082430 PRJNA339542 30 x 5 day old whole flies were used as tissue for RNA extraction. The work-flow was as follows: mRNA extracted -> RNA fragmented -> 1st then 2nd strand cDNA synthesis -> End-IT end repair -> Addition of 'A' bases -> Adapter ligation (TruSeq)-> PCR enrichment. SRS1629919 SAMN05596135 Male_SiI;AutW132_replicate_3 RNA-Seq TRANSCRIPTOMIC RANDOM PCR Illumina HiSeq 2000